| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024691
Identifier: 238024691
GI number: 238024691
Start: 1701855
End: 1703702
Strand: Reverse
Name: 238024691
Synonym: bglu_2g13260
Alternate gene names: NA
Gene position: 1703702-1701855 (Counterclockwise)
Preceding gene: 238024692
Following gene: 238024690
Centisome position: 60.26
GC content: 48.43
Gene sequence:
>1848_bases ATGAAAAATAAATTTTCCCGATCAGTGATGTTTTCGGCTGTGGTGTTTTTGTCGGCATGCGGTGGTGGTGATGATGCACC TTTGCCTCCCAATCCCCAGCCGCAAGCATCGACAACCGTGATGGTTTATATGGTTGGGTCTAATTTGGAAAGCATCCATA AAAGTGCGGATGAGAATATAATCGAAATGCTTAAGGCGTCGCTCCCTCCCAATACCAATGTTGTAATTGAAACCGGAGGG GCCGACGTCAGTAACGATGCGTCTCGGCAGATTCCGGATTGGATTGGTGTGAGGCGGCACGTACTATCGAGCGGAAAAAT CCAGCAGGTCTCTGAGCTCGGGCGGCTAGACATGGGTGCGCCCAAGACATTGTCTGATTTTATCTATTGGGCGCAAAAAC AGTATCCGGCAGGCAGTTATAAACTGCTGATGTGGGATCACGGTGGAGGTTGGACGGGTTTTGGTGGGGATGAAAATACT AAGGCTGCAGATGGCTCCAATTCGATGCTGTCTCTGAATGCCTTGGCTCAAGGCATTCGCGACGGGGTCCAGGCATCGAA TATTCATTTCGATGTTATTGGGTTCGATGCCTGCTTGATGGCTACAGTTGAGGTGTCGACTGCACTGAGCCCATATGCCA ACTATCTTTTGGCTTCCGAAGAAATTGAGCCGGGATCGGGCTGGAATTGGACGTCGGTTATTTCGTCGGCGGCTCAAGAG GCACGAACCTTTGGAAAGGTCGTTGCGGATTCTTATATCTTGAAACAAGAATCTGAGAAAAAAGACGGGACACTGTCTCT CATCGATCTACAAAAAATTGGTGCGGTCCAAAGTGCTCTCGAATCATGGTCGGATTCGGTTATGGCCAAGGCGAGTGCGA ATGATAGTAGCTGGTCCAACATAGTTTGGAAGCGCGCCACTTCGCTCGGTTTCGGCGGAACCGGCGACGGCACTAACGGA GATGGATACCTTGATTTGGTGGATTTAAAGCTTTTCTCGAGAAGCATCTCGGACATCGTGCAAGGCTCGGAGAAACTATC TGATTCGATCAGTCAGGCGGTGGTTTATAATAACACCACTTATAACTATGGCAATGCTTCCGGGCTGACGGCATATTTTC CTTCTCGTTCATTGAGTAGTGCTGCCGGCTCTTTGCGTTATCAAGCTATCAATTTTTCTCAAAAATATCAGGATTTTTCA AAAAACTATCTTTCCGTGATTTCGGCAAAGCCGCGTATTCATGAAATTGATGCTGCAGTCAAAAATGGAGCGATTGCGGC TGATATCAGGGGTGATGCTGGCGTTCTTGATGTTGATAGTTTGTTGTTCTCTTCAGTGAATTCTGATGGTACGGCAACGT TGGTGGGCAGCATGCCGATCTATTCTGGCGCGCAAAACTTCAGGGCAACGGTATCGGTGACGGCTCCGCTCTACGGTGCT TGGCTGACCTTGAATGGTTATCCGCTGATTTTGGGTTATCTGAATCAACAGGGTGACGACCAGCTCTGGGGGGCGCCAAT TGAATTGAATGGTGAATTTACCTATTTGTTGTACACCAAGGAAAATGATGGAAGTTGGGTTGCAGTGGGGACTGCTTCTT CCATAAAAGACCCTGTCTATCGGGTGATGCCTTTGCCTTCTGCTGATGACAAGATTCAAATCTTGGGTGCGAAATTTGAT GTGGGGGCTGCAAAAGCAGTAACCTTGATGCCTGTTACTCCGGAATTTAGCACCGGCAACTTCAATCTACAATTTACGTC AGTTCCGGCCGGTATGAGTCAAGCCGTTTTGGATACGGACGCCACGTTTGACGCCAAGCTTTCCGACATTTATCCCCGCT CAAACTAG
Upstream 100 bases:
>100_bases AAGTCATCCGGCTTTTAAGATTGGATGCAGAGTGTTGATGAGAATTGGAAATTTTTCTGACAGTGGTTGTCTATTCTTTT GAATGAAGTGGGGTTGGTTC
Downstream 100 bases:
>100_bases GGACCGGCCTTGCGATTTTCGGGCCAGTTGAAGCTCGAGGGAATGGCTTCCCACGGAGAAAGGAAGTCATGAAGAAGAGC CGGTTTACGGAATAGCACAT
Product: peptidase C11 clostripain
Products: NA
Alternate protein names: Clostripain; Cysteine Protease; FHA Domain-Containing Protein; APHP Domain Protein; Forkhead-Associated Protein
Number of amino acids: Translated: 615; Mature: 615
Protein sequence:
>615_residues MKNKFSRSVMFSAVVFLSACGGGDDAPLPPNPQPQASTTVMVYMVGSNLESIHKSADENIIEMLKASLPPNTNVVIETGG ADVSNDASRQIPDWIGVRRHVLSSGKIQQVSELGRLDMGAPKTLSDFIYWAQKQYPAGSYKLLMWDHGGGWTGFGGDENT KAADGSNSMLSLNALAQGIRDGVQASNIHFDVIGFDACLMATVEVSTALSPYANYLLASEEIEPGSGWNWTSVISSAAQE ARTFGKVVADSYILKQESEKKDGTLSLIDLQKIGAVQSALESWSDSVMAKASANDSSWSNIVWKRATSLGFGGTGDGTNG DGYLDLVDLKLFSRSISDIVQGSEKLSDSISQAVVYNNTTYNYGNASGLTAYFPSRSLSSAAGSLRYQAINFSQKYQDFS KNYLSVISAKPRIHEIDAAVKNGAIAADIRGDAGVLDVDSLLFSSVNSDGTATLVGSMPIYSGAQNFRATVSVTAPLYGA WLTLNGYPLILGYLNQQGDDQLWGAPIELNGEFTYLLYTKENDGSWVAVGTASSIKDPVYRVMPLPSADDKIQILGAKFD VGAAKAVTLMPVTPEFSTGNFNLQFTSVPAGMSQAVLDTDATFDAKLSDIYPRSN
Sequences:
>Translated_615_residues MKNKFSRSVMFSAVVFLSACGGGDDAPLPPNPQPQASTTVMVYMVGSNLESIHKSADENIIEMLKASLPPNTNVVIETGG ADVSNDASRQIPDWIGVRRHVLSSGKIQQVSELGRLDMGAPKTLSDFIYWAQKQYPAGSYKLLMWDHGGGWTGFGGDENT KAADGSNSMLSLNALAQGIRDGVQASNIHFDVIGFDACLMATVEVSTALSPYANYLLASEEIEPGSGWNWTSVISSAAQE ARTFGKVVADSYILKQESEKKDGTLSLIDLQKIGAVQSALESWSDSVMAKASANDSSWSNIVWKRATSLGFGGTGDGTNG DGYLDLVDLKLFSRSISDIVQGSEKLSDSISQAVVYNNTTYNYGNASGLTAYFPSRSLSSAAGSLRYQAINFSQKYQDFS KNYLSVISAKPRIHEIDAAVKNGAIAADIRGDAGVLDVDSLLFSSVNSDGTATLVGSMPIYSGAQNFRATVSVTAPLYGA WLTLNGYPLILGYLNQQGDDQLWGAPIELNGEFTYLLYTKENDGSWVAVGTASSIKDPVYRVMPLPSADDKIQILGAKFD VGAAKAVTLMPVTPEFSTGNFNLQFTSVPAGMSQAVLDTDATFDAKLSDIYPRSN >Mature_615_residues MKNKFSRSVMFSAVVFLSACGGGDDAPLPPNPQPQASTTVMVYMVGSNLESIHKSADENIIEMLKASLPPNTNVVIETGG ADVSNDASRQIPDWIGVRRHVLSSGKIQQVSELGRLDMGAPKTLSDFIYWAQKQYPAGSYKLLMWDHGGGWTGFGGDENT KAADGSNSMLSLNALAQGIRDGVQASNIHFDVIGFDACLMATVEVSTALSPYANYLLASEEIEPGSGWNWTSVISSAAQE ARTFGKVVADSYILKQESEKKDGTLSLIDLQKIGAVQSALESWSDSVMAKASANDSSWSNIVWKRATSLGFGGTGDGTNG DGYLDLVDLKLFSRSISDIVQGSEKLSDSISQAVVYNNTTYNYGNASGLTAYFPSRSLSSAAGSLRYQAINFSQKYQDFS KNYLSVISAKPRIHEIDAAVKNGAIAADIRGDAGVLDVDSLLFSSVNSDGTATLVGSMPIYSGAQNFRATVSVTAPLYGA WLTLNGYPLILGYLNQQGDDQLWGAPIELNGEFTYLLYTKENDGSWVAVGTASSIKDPVYRVMPLPSADDKIQILGAKFD VGAAKAVTLMPVTPEFSTGNFNLQFTSVPAGMSQAVLDTDATFDAKLSDIYPRSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65700; Mature: 65700
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKFSRSVMFSAVVFLSACGGGDDAPLPPNPQPQASTTVMVYMVGSNLESIHKSADENI CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHH IEMLKASLPPNTNVVIETGGADVSNDASRQIPDWIGVRRHVLSSGKIQQVSELGRLDMGA HHHHHHCCCCCCCEEEECCCCCCCCCCHHCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCC PKTLSDFIYWAQKQYPAGSYKLLMWDHGGGWTGFGGDENTKAADGSNSMLSLNALAQGIR CCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHH DGVQASNIHFDVIGFDACLMATVEVSTALSPYANYLLASEEIEPGSGWNWTSVISSAAQE CCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHH ARTFGKVVADSYILKQESEKKDGTLSLIDLQKIGAVQSALESWSDSVMAKASANDSSWSN HHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHEEEECCCCCCCHHH IVWKRATSLGFGGTGDGTNGDGYLDLVDLKLFSRSISDIVQGSEKLSDSISQAVVYNNTT HHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCHHHHHHHHHHEEEECCCE YNYGNASGLTAYFPSRSLSSAAGSLRYQAINFSQKYQDFSKNYLSVISAKPRIHEIDAAV ECCCCCCCEEEECCCCCHHHHHCCEEEEEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHH KNGAIAADIRGDAGVLDVDSLLFSSVNSDGTATLVGSMPIYSGAQNFRATVSVTAPLYGA HCCCEEEECCCCCCEEEHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCEEE WLTLNGYPLILGYLNQQGDDQLWGAPIELNGEFTYLLYTKENDGSWVAVGTASSIKDPVY EEEECCCEEEEEECCCCCCCCCCCCCEEECCCEEEEEEEECCCCCEEEEECHHHCCCCCE RVMPLPSADDKIQILGAKFDVGAAKAVTLMPVTPEFSTGNFNLQFTSVPAGMSQAVLDTD EEECCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCHHHCCCC ATFDAKLSDIYPRSN CCCCCCHHCCCCCCC >Mature Secondary Structure MKNKFSRSVMFSAVVFLSACGGGDDAPLPPNPQPQASTTVMVYMVGSNLESIHKSADENI CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHH IEMLKASLPPNTNVVIETGGADVSNDASRQIPDWIGVRRHVLSSGKIQQVSELGRLDMGA HHHHHHCCCCCCCEEEECCCCCCCCCCHHCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCC PKTLSDFIYWAQKQYPAGSYKLLMWDHGGGWTGFGGDENTKAADGSNSMLSLNALAQGIR CCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHH DGVQASNIHFDVIGFDACLMATVEVSTALSPYANYLLASEEIEPGSGWNWTSVISSAAQE CCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHH ARTFGKVVADSYILKQESEKKDGTLSLIDLQKIGAVQSALESWSDSVMAKASANDSSWSN HHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHEEEECCCCCCCHHH IVWKRATSLGFGGTGDGTNGDGYLDLVDLKLFSRSISDIVQGSEKLSDSISQAVVYNNTT HHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCHHHHHHHHHHEEEECCCE YNYGNASGLTAYFPSRSLSSAAGSLRYQAINFSQKYQDFSKNYLSVISAKPRIHEIDAAV ECCCCCCCEEEECCCCCHHHHHCCEEEEEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHH KNGAIAADIRGDAGVLDVDSLLFSSVNSDGTATLVGSMPIYSGAQNFRATVSVTAPLYGA HCCCEEEECCCCCCEEEHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCEEE WLTLNGYPLILGYLNQQGDDQLWGAPIELNGEFTYLLYTKENDGSWVAVGTASSIKDPVY EEEECCCEEEEEECCCCCCCCCCCCCEEECCCEEEEEEEECCCCCEEEEECHHHCCCCCE RVMPLPSADDKIQILGAKFDVGAAKAVTLMPVTPEFSTGNFNLQFTSVPAGMSQAVLDTD EEECCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCHHHCCCC ATFDAKLSDIYPRSN CCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA