| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024553
Identifier: 238024553
GI number: 238024553
Start: 1472561
End: 1473205
Strand: Reverse
Name: 238024553
Synonym: bglu_2g11600
Alternate gene names: NA
Gene position: 1473205-1472561 (Counterclockwise)
Preceding gene: 238024554
Following gene: 238024550
Centisome position: 52.11
GC content: 79.07
Gene sequence:
>645_bases ATGTCCGATACCGTTTCCCTGCCGCGCTACAGCGGCTTCGAGGGCGTCACGCACCTGGCGTCCGGCGATCTCGCGACGGT TGCGCTCGCGATTCGCCAGGCGGCGCGGGCGGCCGACGCGCGCACGGTGCTGCTGTTCGACAATGCGACGGGCCGTGCCA TCGACGTCGACCTGCGCGGCAGCGACGACGAGATCCTTGCCCGCCTGGCCGCCGCGGCCGGCACCGGGGCCGCCGCCCCC GACCCCGACGCCGGCGGCGAGGCGGCCGCCGAGGGGCCGCCTGCCGGCGGGGCGCCGCGTGGCCGGGGCCGGCCCAGGCT CGGCGTGGTCGCGCGCGAGGTCACGCTGCTGCCGCGCCACTGGGACTGGCTGGCCAGCCAGCCGGGCGGCGCCTCGGTGG CGCTGCGCAAGCTGGTGGACGAGGCGCGCCGCGTGTCCGGCGAGCGCGACCGGCGGCGCGCCGCGCACGCGCGCGCCTGT CACTTCATGTCGGCGCTGGCGGGCGACCTGCCGGGCTTCGAGGAAGCCGCGCGCGCGCTGCTCGCCGACGACGCGGCCGG CCTCCGGCAGCGCATCGCCGGCTGGCCCGCCGACGTCCAGGCCCATCTGCTGCGGCTCGCGCAGCCCGGGCCGGCCGAAG CCTGA
Upstream 100 bases:
>100_bases GCGGCCGTGTGGTGAGCGCCGGCCGCGGCCCGGCCGGCCGGTGCGGCTCCCGGATGCCGGCCTGGCCTTCTTTCCTCATC GTTTGAGCGACGCCGCAACC
Downstream 100 bases:
>100_bases GCGGCCGAGCTTCGGGCGTCCGGGCGTGTGGAGCGCCACGCGCGGGCCGCGTCCCCCATCACGGCAGGCTGGCGATGCGC CGGTGGAGCGCCGCGTAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MSDTVSLPRYSGFEGVTHLASGDLATVALAIRQAARAADARTVLLFDNATGRAIDVDLRGSDDEILARLAAAAGTGAAAP DPDAGGEAAAEGPPAGGAPRGRGRPRLGVVAREVTLLPRHWDWLASQPGGASVALRKLVDEARRVSGERDRRRAAHARAC HFMSALAGDLPGFEEAARALLADDAAGLRQRIAGWPADVQAHLLRLAQPGPAEA
Sequences:
>Translated_214_residues MSDTVSLPRYSGFEGVTHLASGDLATVALAIRQAARAADARTVLLFDNATGRAIDVDLRGSDDEILARLAAAAGTGAAAP DPDAGGEAAAEGPPAGGAPRGRGRPRLGVVAREVTLLPRHWDWLASQPGGASVALRKLVDEARRVSGERDRRRAAHARAC HFMSALAGDLPGFEEAARALLADDAAGLRQRIAGWPADVQAHLLRLAQPGPAEA >Mature_213_residues SDTVSLPRYSGFEGVTHLASGDLATVALAIRQAARAADARTVLLFDNATGRAIDVDLRGSDDEILARLAAAAGTGAAAPD PDAGGEAAAEGPPAGGAPRGRGRPRLGVVAREVTLLPRHWDWLASQPGGASVALRKLVDEARRVSGERDRRRAAHARACH FMSALAGDLPGFEEAARALLADDAAGLRQRIAGWPADVQAHLLRLAQPGPAEA
Specific function: Unknown
COG id: COG3644
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22138; Mature: 22007
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTVSLPRYSGFEGVTHLASGDLATVALAIRQAARAADARTVLLFDNATGRAIDVDLRG CCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEECC SDDEILARLAAAAGTGAAAPDPDAGGEAAAEGPPAGGAPRGRGRPRLGVVAREVTLLPRH CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCH WDWLASQPGGASVALRKLVDEARRVSGERDRRRAAHARACHFMSALAGDLPGFEEAARAL HHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH LADDAAGLRQRIAGWPADVQAHLLRLAQPGPAEA HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SDTVSLPRYSGFEGVTHLASGDLATVALAIRQAARAADARTVLLFDNATGRAIDVDLRG CCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEECC SDDEILARLAAAAGTGAAAPDPDAGGEAAAEGPPAGGAPRGRGRPRLGVVAREVTLLPRH CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCH WDWLASQPGGASVALRKLVDEARRVSGERDRRRAAHARACHFMSALAGDLPGFEEAARAL HHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH LADDAAGLRQRIAGWPADVQAHLLRLAQPGPAEA HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA