| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is paaA [H]
Identifier: 238024548
GI number: 238024548
Start: 1465090
End: 1466046
Strand: Reverse
Name: paaA [H]
Synonym: bglu_2g11540
Alternate gene names: 238024548
Gene position: 1466046-1465090 (Counterclockwise)
Preceding gene: 238024549
Following gene: 238024547
Centisome position: 51.85
GC content: 67.5
Gene sequence:
>957_bases ATGGACATCCTGGACACTGAACAGGTCGACGAAGCCGCATTCCAGCAGCGCATCGACGACGGCCGCAAGATCGAGCCGCA GGACCCCATGCCGGCCGCCTACCGCCGCACGCTGATGCGCCAGATGGCCCAGCACGCGCACTCGGAATACGTCGGCATGC TGCCCGAGGGCGGCTGGATCGCACGCGCCCCCACGCTGCACCGCAAGTGCATCCTGCTCGCCAAGGTGCAGGACGAGGCC GGCCACGCCCAGTACCTCTACAGCGCGATGGAGACGCTCGGCATCTCGCGCGCGCAGGCTTACCAGCAGCTGCTCGAGGG CCGGGCGAAGTACCTGAACATCTTCAACTATCCGGCGCTGAGCTGGGCCGACGTGGGCATGATCGGCTGGCTGACCGACG GTGCGGCGATCGTCAACCAGGTGCCGCTGTCGCGCTGCTCCTACGGGCCGTATGCGCGCGCCATGGTGCGGATCTGCCAG GAGGAGAGCTTTCACCACCGGCAGGGCTTCGACCTGGTGATGAAGCTCGCGCAGGGCACGCCGGCGCAGCGCCAGATGGC GCAGGACGCGCTGAACCGCTGGTGGTGGCCGACGCTGATGGTGTTCGGCCCGCCCGATGCCGATTCGCCGCACTCGGCGC GCTCGATGAAGTGGGGCATCAAGCTCTATTCCAACGACGCGCTGCGCCAGAAATTCATCGATCAGACCGTGCCGCAGGTG CATTACCTCGGCCTGGAAGTGCCGGACGATCAGTTGCGCTTCAACGAGGAGACCGGCCACTACGAGACCGGGCCGATCGA CTGGGACGAGTTCGAGCGCGTGATCAACGGCGGCGGGCTTTGCAACCGTGCCCGCATCGAGGCGCGCAACAAGGCCTGGG ACGACGGCGCCTGGGTGCGCGAGGCGGCTGCCGCCTATGCCGCCCGTCAGGAAATTGCGGAGGCCGCGCATGGCTGA
Upstream 100 bases:
>100_bases CGTCGAGCTGCGCTGGAACCACCAGGCCGATCTGTCCGCGCTGCCGCGCGAAGCCGAGCGCAGCCTGCTCGAACACGTGT TCGCGGCTTGAGGAGGCGAG
Downstream 100 bases:
>100_bases CTGGAAACTCTGGGAAGTGTTCGCGCGCAGCCAGAACGGCCTGGCGCACCGCCATGTGGGCAGCGTGCAGGCTGCCGACG CGCAGATGGCGCTGCAACAC
Product: phenylacetate-CoA oxygenase subunit PaaA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MDILDTEQVDEAAFQQRIDDGRKIEPQDPMPAAYRRTLMRQMAQHAHSEYVGMLPEGGWIARAPTLHRKCILLAKVQDEA GHAQYLYSAMETLGISRAQAYQQLLEGRAKYLNIFNYPALSWADVGMIGWLTDGAAIVNQVPLSRCSYGPYARAMVRICQ EESFHHRQGFDLVMKLAQGTPAQRQMAQDALNRWWWPTLMVFGPPDADSPHSARSMKWGIKLYSNDALRQKFIDQTVPQV HYLGLEVPDDQLRFNEETGHYETGPIDWDEFERVINGGGLCNRARIEARNKAWDDGAWVREAAAAYAARQEIAEAAHG
Sequences:
>Translated_318_residues MDILDTEQVDEAAFQQRIDDGRKIEPQDPMPAAYRRTLMRQMAQHAHSEYVGMLPEGGWIARAPTLHRKCILLAKVQDEA GHAQYLYSAMETLGISRAQAYQQLLEGRAKYLNIFNYPALSWADVGMIGWLTDGAAIVNQVPLSRCSYGPYARAMVRICQ EESFHHRQGFDLVMKLAQGTPAQRQMAQDALNRWWWPTLMVFGPPDADSPHSARSMKWGIKLYSNDALRQKFIDQTVPQV HYLGLEVPDDQLRFNEETGHYETGPIDWDEFERVINGGGLCNRARIEARNKAWDDGAWVREAAAAYAARQEIAEAAHG >Mature_318_residues MDILDTEQVDEAAFQQRIDDGRKIEPQDPMPAAYRRTLMRQMAQHAHSEYVGMLPEGGWIARAPTLHRKCILLAKVQDEA GHAQYLYSAMETLGISRAQAYQQLLEGRAKYLNIFNYPALSWADVGMIGWLTDGAAIVNQVPLSRCSYGPYARAMVRICQ EESFHHRQGFDLVMKLAQGTPAQRQMAQDALNRWWWPTLMVFGPPDADSPHSARSMKWGIKLYSNDALRQKFIDQTVPQV HYLGLEVPDDQLRFNEETGHYETGPIDWDEFERVINGGGLCNRARIEARNKAWDDGAWVREAAAAYAARQEIAEAAHG
Specific function: May be part of a multicomponent oxygenase involved in phenylacetyl-CoA hydroxylation [H]
COG id: COG3396
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787654, Length=306, Percent_Identity=65.6862745098039, Blast_Score=432, Evalue=1e-122,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR011881 - InterPro: IPR007814 [H]
Pfam domain/function: PF05138 PaaA_PaaC [H]
EC number: NA
Molecular weight: Translated: 36076; Mature: 36076
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDILDTEQVDEAAFQQRIDDGRKIEPQDPMPAAYRRTLMRQMAQHAHSEYVGMLPEGGWI CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEE ARAPTLHRKCILLAKVQDEAGHAQYLYSAMETLGISRAQAYQQLLEGRAKYLNIFNYPAL ECCCHHHHHEEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC SWADVGMIGWLTDGAAIVNQVPLSRCSYGPYARAMVRICQEESFHHRQGFDLVMKLAQGT CHHHCCHHHHHCCCHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCC PAQRQMAQDALNRWWWPTLMVFGPPDADSPHSARSMKWGIKLYSNDALRQKFIDQTVPQV CHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHCEEEECCHHHHHHHHHHHCCCE HYLGLEVPDDQLRFNEETGHYETGPIDWDEFERVINGGGLCNRARIEARNKAWDDGAWVR EEECCCCCCHHHEECCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHCCCCCCCHHHHH EAAAAYAARQEIAEAAHG HHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDILDTEQVDEAAFQQRIDDGRKIEPQDPMPAAYRRTLMRQMAQHAHSEYVGMLPEGGWI CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEE ARAPTLHRKCILLAKVQDEAGHAQYLYSAMETLGISRAQAYQQLLEGRAKYLNIFNYPAL ECCCHHHHHEEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC SWADVGMIGWLTDGAAIVNQVPLSRCSYGPYARAMVRICQEESFHHRQGFDLVMKLAQGT CHHHCCHHHHHCCCHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCC PAQRQMAQDALNRWWWPTLMVFGPPDADSPHSARSMKWGIKLYSNDALRQKFIDQTVPQV CHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHCEEEECCHHHHHHHHHHHCCCE HYLGLEVPDDQLRFNEETGHYETGPIDWDEFERVINGGGLCNRARIEARNKAWDDGAWVR EEECCCCCCHHHEECCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHCCCCCCCHHHHH EAAAAYAARQEIAEAAHG HHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9748275; 9278503; 10766858 [H]