| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
Click here to switch to the map view.
The map label for this gene is tauD [H]
Identifier: 238024535
GI number: 238024535
Start: 1453258
End: 1454175
Strand: Reverse
Name: tauD [H]
Synonym: bglu_2g11410
Alternate gene names: 238024535
Gene position: 1454175-1453258 (Counterclockwise)
Preceding gene: 238024536
Following gene: 238024534
Centisome position: 51.43
GC content: 69.93
Gene sequence:
>918_bases GTGAGCGTGTCGGCCCTGCTAGCCTGTTCTCCTTGCGTGCCGCCCGCGGCCGCCCAGCCGCCCGAGCGCGGGTTCGACAT CGTGCCGTTCGACGGCCCGCTCGGCGCCGAAGTGGTCGGGCTCGATCTCTCGCAGCCGCTCGGCGAGGCGGCGTTCGCGC GCATCCATCGCGCCCATCTCGATCACCACTTGCTGGTGTTTCGCGAGCAGCGCATCACGCCCGAGCAGCAGGTGGCCTTC AGCCGCCGCTTCGGCCCGCTGCAGACCCACGTGCTGCACCAGTTCGCGCTGCCCGGGCATCCCGAGGTGCTGATCGTGTC GAACATCGTCGAGAACGGCAAGCCGATCGGCCTCGGCGACGCGGGCCACTTCTGGCATTCGGACCTGTCCTACAAGGAGA AGCCGAGCCTCGGCTCGCTGCTGCACGCGCAGGAACTGCCCACCGAGGGCGGCGACACGCTGTTCGCCAACATGCACCTG GCCTGGGAGACGCTGCCCGAGGCGCTCAAGCAAGCCGTGCGCGGGCGCCGCGCCGAGCACACCTATCTGGCGCGCTATGC CGAGCTGCAGGCACGCAGCCCGTGGCGGCCGAACCTGAGTGCGGAGCAGCTCGCGCAGGTGAAGGCGGTGCAGCAGCCGA TCGTGCGCACCCATCCGGAAACGGGCCGCCGCGCCCTGTTCGTCAGCGAGCATTTCACGACGCGCATCGTCGGCCTGCCC GAGGACGAGAGCCGCGCGCTGCTCGACGAGCTGTTCGCGCACAGCGTGCGCGACGAGTTCGTCTATCGCCACCGGTGGCG CGAGCACGACCTGGTGTTCTGGGACAACCGCTCGCTGATGCATCTGGCGGCCGGCACGCCCGACCATCTGCGCCGCAAGC TGTATCGCACCACGATCGAGGGCGACGTGCCCGTCTGA
Upstream 100 bases:
>100_bases GCGTTATGACCACGGCTGATATCCGTATCGCTTTTGCTTCGTTGTCATGCGCCGGGCGCGGCCGTAAATTGGCGTTTTCG TTTCGCCGGAATCGTAGAAC
Downstream 100 bases:
>100_bases GGCGGCCGCCGGCGGCGCCGCTCGCCGCCGGCGGTTCGCGCTCGGCAGCCGGCGCGCCGCTGCCGCACGCGCGGCTGCCG CCGTTGCCGTCCCGCCGTTT
Product: Taurine dioxygenase
Products: NA
Alternate protein names: 2-aminoethanesulfonate dioxygenase; Sulfate starvation-induced protein 3; SSI3 [H]
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MSVSALLACSPCVPPAAAQPPERGFDIVPFDGPLGAEVVGLDLSQPLGEAAFARIHRAHLDHHLLVFREQRITPEQQVAF SRRFGPLQTHVLHQFALPGHPEVLIVSNIVENGKPIGLGDAGHFWHSDLSYKEKPSLGSLLHAQELPTEGGDTLFANMHL AWETLPEALKQAVRGRRAEHTYLARYAELQARSPWRPNLSAEQLAQVKAVQQPIVRTHPETGRRALFVSEHFTTRIVGLP EDESRALLDELFAHSVRDEFVYRHRWREHDLVFWDNRSLMHLAAGTPDHLRRKLYRTTIEGDVPV
Sequences:
>Translated_305_residues MSVSALLACSPCVPPAAAQPPERGFDIVPFDGPLGAEVVGLDLSQPLGEAAFARIHRAHLDHHLLVFREQRITPEQQVAF SRRFGPLQTHVLHQFALPGHPEVLIVSNIVENGKPIGLGDAGHFWHSDLSYKEKPSLGSLLHAQELPTEGGDTLFANMHL AWETLPEALKQAVRGRRAEHTYLARYAELQARSPWRPNLSAEQLAQVKAVQQPIVRTHPETGRRALFVSEHFTTRIVGLP EDESRALLDELFAHSVRDEFVYRHRWREHDLVFWDNRSLMHLAAGTPDHLRRKLYRTTIEGDVPV >Mature_304_residues SVSALLACSPCVPPAAAQPPERGFDIVPFDGPLGAEVVGLDLSQPLGEAAFARIHRAHLDHHLLVFREQRITPEQQVAFS RRFGPLQTHVLHQFALPGHPEVLIVSNIVENGKPIGLGDAGHFWHSDLSYKEKPSLGSLLHAQELPTEGGDTLFANMHLA WETLPEALKQAVRGRRAEHTYLARYAELQARSPWRPNLSAEQLAQVKAVQQPIVRTHPETGRRALFVSEHFTTRIVGLPE DESRALLDELFAHSVRDEFVYRHRWREHDLVFWDNRSLMHLAAGTPDHLRRKLYRTTIEGDVPV
Specific function: Catalyzes the conversion of taurine and alpha ketoglutarate to sulfite, aminoacetaldehyde and succinate. Required for the utilization of taurine (2-aminoethanesulfonic acid) as an alternative sulfur source. Pentane-sulfonic acid, 3- (N-morpholino)propanes
COG id: COG2175
COG function: function code Q; Probable taurine catabolism dioxygenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tfdA dioxygenase family [H]
Homologues:
Organism=Escherichia coli, GI1786565, Length=286, Percent_Identity=38.4615384615385, Blast_Score=189, Evalue=3e-49, Organism=Saccharomyces cerevisiae, GI6322971, Length=285, Percent_Identity=28.0701754385965, Blast_Score=87, Evalue=4e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003819 [H]
Pfam domain/function: PF02668 TauD [H]
EC number: =1.14.11.17 [H]
Molecular weight: Translated: 34350; Mature: 34219
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVSALLACSPCVPPAAAQPPERGFDIVPFDGPLGAEVVGLDLSQPLGEAAFARIHRAHL CCCCCEEEECCCCCCCCCCCCCCCCEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHHHC DHHLLVFREQRITPEQQVAFSRRFGPLQTHVLHQFALPGHPEVLIVSNIVENGKPIGLGD CCCEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEHHHHCCCCCCCCC AGHFWHSDLSYKEKPSLGSLLHAQELPTEGGDTLFANMHLAWETLPEALKQAVRGRRAEH CCCHHCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCHH TYLARYAELQARSPWRPNLSAEQLAQVKAVQQPIVRTHPETGRRALFVSEHFTTRIVGLP HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEECCC EDESRALLDELFAHSVRDEFVYRHRWREHDLVFWDNRSLMHLAAGTPDHLRRKLYRTTIE CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEECCCHHHHHHHHHHHHCC GDVPV CCCCC >Mature Secondary Structure SVSALLACSPCVPPAAAQPPERGFDIVPFDGPLGAEVVGLDLSQPLGEAAFARIHRAHL CCCCEEEECCCCCCCCCCCCCCCCEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHHHC DHHLLVFREQRITPEQQVAFSRRFGPLQTHVLHQFALPGHPEVLIVSNIVENGKPIGLGD CCCEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEHHHHCCCCCCCCC AGHFWHSDLSYKEKPSLGSLLHAQELPTEGGDTLFANMHLAWETLPEALKQAVRGRRAEH CCCHHCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCHH TYLARYAELQARSPWRPNLSAEQLAQVKAVQQPIVRTHPETGRRALFVSEHFTTRIVGLP HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEECCC EDESRALLDELFAHSVRDEFVYRHRWREHDLVFWDNRSLMHLAAGTPDHLRRKLYRTTIE CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEECCCHHHHHHHHHHHHCC GDVPV CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8808933; 9278503; 2656410; 8774726; 7984428; 9287300; 11955067 [H]