| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024534
Identifier: 238024534
GI number: 238024534
Start: 1452056
End: 1453111
Strand: Reverse
Name: 238024534
Synonym: bglu_2g11400
Alternate gene names: NA
Gene position: 1453111-1452056 (Counterclockwise)
Preceding gene: 238024535
Following gene: 238024533
Centisome position: 51.4
GC content: 69.6
Gene sequence:
>1056_bases ATGCCGTTTCCGTTCCGCGCCTTGCTCGCGCGCACCACGCTTCACGCGCGCCGCGCCGGCGCCGCGCTCGTCGCCGCTAC GGCGGCCGCCGGCGGCCTCGGCGCTGCGGCGCCCGCCCATGCCGAGGGCAGGATCCGGATCGCCGAGCAGTTCGGCGTCG TCTACCTGATGCTGAACGTGGCGCGCGACCAGCACCTGATCGAGCAGGAAGGCAAGAAGGCAGGCATCGGCATCCAGGTG GACTGGGTCAAGCTGTCGGGCGGCGCGGCCGTCAACGATGCGCTGCTGTCGGGCGCGATCGACGTCGCCGGTGCCGGCAC CGGCCCGCTGCTGACGGTCTGGGACCGCACGCGCGGACACCAGGACGTGAAGGGCGTGGCCTCGCTCGGCAACCTGCCGT ACCAGCTCGTGAGCAACGATCCGGCCGTGAAGACGATCGCCGATTTCAGCGCGAGGGACCGCATCGCGGTGCCGGCGGTG GGCGTGTCGGTGCAGTCGCGCCTGCTGCAGTACGCCGCCGCGAAGCAGTGGGGCGACAAGTCGTTCGACCGGCTCGACAA GCTCACGCAGGCGATTCCGCACCCCGACGCGGCCGCCGCGATCCTCGCCAACAGCAGCGTGATCACCGCCCACTTCGGCA ATCCGCCGTTCCAGCAGCAGGAGCTGGCCGGCAACCCGAAGGCGCACGTCGTGCTGAATTCCTACGACGTGCTCGGCGGC CCGAGTTCGGCCACGGTGCTGTACGCGACCTCGAAGTTCCGCGACGCGAACCCGAAGACCTATCGCGCCTTCGTGGCGGC GCTGGCCGACGCGGCGAAACTGATCGCGGCCGATCCCGAGCGCGCGGCCGACATCTACCTTCGCGTGAACCAGTCGAAGA TCGATCGCGCGCTGCTGCTGAAGATCCTGCGCGACCCGCAGGTGCAGTTCAAGACGGCGCCGCAGAACACGCTCGGCCTC GCGCAGTTCATGTATCGCGTGGGCGCGATTCGCCACCAGCCGAAATCGGTCCACGACTATTTCTTCGACGATCCGGCCAC GCAGGGCGGCAGCTGA
Upstream 100 bases:
>100_bases AGCCGGCGCGCCGCTGCCGCACGCGCGGCTGCCGCCGTTGCCGTCCCGCCGTTTTCCGCGCGCTCCGTTTGCGCTTCCTT CAGCCGTCGAGAGGTTGCCG
Downstream 100 bases:
>100_bases GCGCCGCGCTTATCGGCGCGCCGCATTTGGATAGCGGCAATGATTGGTTGGGATCGCCCCTGCGCGCCGGTATGTTGATG TTTTGTCCGTCGCATCGTCG
Product: ABC transporter substrate binding protein
Products: NA
Alternate protein names: NMT1/THI5 Like Domain Protein; NLPA Lipoprotein; Transporter Periplasmic Component; Nlpa Lipoprotein; ABC-Type Transporter Periplasmic; Periplasmic Protein
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MPFPFRALLARTTLHARRAGAALVAATAAAGGLGAAAPAHAEGRIRIAEQFGVVYLMLNVARDQHLIEQEGKKAGIGIQV DWVKLSGGAAVNDALLSGAIDVAGAGTGPLLTVWDRTRGHQDVKGVASLGNLPYQLVSNDPAVKTIADFSARDRIAVPAV GVSVQSRLLQYAAAKQWGDKSFDRLDKLTQAIPHPDAAAAILANSSVITAHFGNPPFQQQELAGNPKAHVVLNSYDVLGG PSSATVLYATSKFRDANPKTYRAFVAALADAAKLIAADPERAADIYLRVNQSKIDRALLLKILRDPQVQFKTAPQNTLGL AQFMYRVGAIRHQPKSVHDYFFDDPATQGGS
Sequences:
>Translated_351_residues MPFPFRALLARTTLHARRAGAALVAATAAAGGLGAAAPAHAEGRIRIAEQFGVVYLMLNVARDQHLIEQEGKKAGIGIQV DWVKLSGGAAVNDALLSGAIDVAGAGTGPLLTVWDRTRGHQDVKGVASLGNLPYQLVSNDPAVKTIADFSARDRIAVPAV GVSVQSRLLQYAAAKQWGDKSFDRLDKLTQAIPHPDAAAAILANSSVITAHFGNPPFQQQELAGNPKAHVVLNSYDVLGG PSSATVLYATSKFRDANPKTYRAFVAALADAAKLIAADPERAADIYLRVNQSKIDRALLLKILRDPQVQFKTAPQNTLGL AQFMYRVGAIRHQPKSVHDYFFDDPATQGGS >Mature_350_residues PFPFRALLARTTLHARRAGAALVAATAAAGGLGAAAPAHAEGRIRIAEQFGVVYLMLNVARDQHLIEQEGKKAGIGIQVD WVKLSGGAAVNDALLSGAIDVAGAGTGPLLTVWDRTRGHQDVKGVASLGNLPYQLVSNDPAVKTIADFSARDRIAVPAVG VSVQSRLLQYAAAKQWGDKSFDRLDKLTQAIPHPDAAAAILANSSVITAHFGNPPFQQQELAGNPKAHVVLNSYDVLGGP SSATVLYATSKFRDANPKTYRAFVAALADAAKLIAADPERAADIYLRVNQSKIDRALLLKILRDPQVQFKTAPQNTLGLA QFMYRVGAIRHQPKSVHDYFFDDPATQGGS
Specific function: Unknown
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37267; Mature: 37136
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFPFRALLARTTLHARRAGAALVAATAAAGGLGAAAPAHAEGRIRIAEQFGVVYLMLNV CCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHCEEEEEEHH ARDQHLIEQEGKKAGIGIQVDWVKLSGGAAVNDALLSGAIDVAGAGTGPLLTVWDRTRGH HHHHHHHHHCCCCCCCCEEEEEEEECCCCHHHHHHHHCCCEECCCCCCCEEEEECCCCCC QDVKGVASLGNLPYQLVSNDPAVKTIADFSARDRIAVPAVGVSVQSRLLQYAAAKQWGDK HHHHHHHHHCCCCEEEECCCCCHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHCCCH SFDRLDKLTQAIPHPDAAAAILANSSVITAHFGNPPFQQQELAGNPKAHVVLNSYDVLGG HHHHHHHHHHHCCCCCHHHHEEECCCEEEEECCCCCCCHHHHCCCCCEEEEEECEECCCC PSSATVLYATSKFRDANPKTYRAFVAALADAAKLIAADPERAADIYLRVNQSKIDRALLL CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHH KILRDPQVQFKTAPQNTLGLAQFMYRVGAIRHQPKSVHDYFFDDPATQGGS HHHCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCC >Mature Secondary Structure PFPFRALLARTTLHARRAGAALVAATAAAGGLGAAAPAHAEGRIRIAEQFGVVYLMLNV CCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHCEEEEEEHH ARDQHLIEQEGKKAGIGIQVDWVKLSGGAAVNDALLSGAIDVAGAGTGPLLTVWDRTRGH HHHHHHHHHCCCCCCCCEEEEEEEECCCCHHHHHHHHCCCEECCCCCCCEEEEECCCCCC QDVKGVASLGNLPYQLVSNDPAVKTIADFSARDRIAVPAVGVSVQSRLLQYAAAKQWGDK HHHHHHHHHCCCCEEEECCCCCHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHCCCH SFDRLDKLTQAIPHPDAAAAILANSSVITAHFGNPPFQQQELAGNPKAHVVLNSYDVLGG HHHHHHHHHHHCCCCCHHHHEEECCCEEEEECCCCCCCHHHHCCCCCEEEEEECEECCCC PSSATVLYATSKFRDANPKTYRAFVAALADAAKLIAADPERAADIYLRVNQSKIDRALLL CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHH KILRDPQVQFKTAPQNTLGLAQFMYRVGAIRHQPKSVHDYFFDDPATQGGS HHHCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA