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The map label for this gene is fadR [H]

Identifier: 238024525

GI number: 238024525

Start: 1445346

End: 1446074

Strand: Direct

Name: fadR [H]

Synonym: bglu_2g11310

Alternate gene names: 238024525

Gene position: 1445346-1446074 (Clockwise)

Preceding gene: 238024515

Following gene: 238024529

Centisome position: 51.12

GC content: 72.7

Gene sequence:

>729_bases
ATGACGAGCAGCCCCGTCAAGTCCGAGCGCGCCGACGGCAGCCGCGCGCCCGCCGGACGCAAGTCGCAGCAGCGCGTGCA
GGAGATCCTGCGCGCCGGGCGCGAGGTGTTCGCGGAGAAAGGCTACGAGCACGCCACCGCAGCCGAGATCGCGCAGCGCG
TGGGGGTGTCCGAGGCCACCGTGTTCAGCTACTTTCGCGGCAAGCGCGAGCTGTGCGCGCGCGTGATCGCGGACTGGTAC
GACGAGAACATCGCGACCTTCGAGGCAGGCTTGCCGGCGCTCGCCCCGGTGCGGGAGCAGTTCGCCTTCATCGTGCGCAC
CCATTTGCGGCTGATGCTGGTAAACGGCACCGGGCTGTGCGCGCTGGTGCTGTCGGAGGGGCGCGCCAGGCAGGAGATGC
TCGGCGACGAGCTGAGCGCGCTGCAGCGGCGCTATACCGCGCCGCTGATGAAGGTGCTCGCGCGCGGGCAGGCTCAGGGG
CAGGTGCGGGCCGACCATGACCCCCTGAGCCTGCTGCGCTCGCTGGTGTTCGGGCCGATCGAGCACGTGCTGTGGGACGC
GATCCTGGGCCGGCGCGAGCTCGATGCGGAGCGCACGGCCGAGCAGCTGATCGGCGTGCTGTGGGCGGCGTTGCAGCCGC
CGGCGCCGGACGTGGCGGCGCTGGCTCAGTTCGAGCGCGACGTCAGGGAAGCGCTGGGGCGGGTGGCCGGCGCGGCCGGG
GCGCGCTGA

Upstream 100 bases:

>100_bases
GCCCAATCATGCGTCAATTGTTTTTTTTGAGTGACACTCAAAATATTGGCCGGACTCGGCTATCATCGGCCCCATCGATC
GAGCGGAACGGAAATCCATC

Downstream 100 bases:

>100_bases
ACGGCGCTGCCCGCCGGGCGCGGGCCACGCTCACAGGTCGCCGCGCACCTCGCCGGTGCCGAGCGCGCTGCGCTGCCGGT
TGACCTCGGCCCAGAGCGCC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MTSSPVKSERADGSRAPAGRKSQQRVQEILRAGREVFAEKGYEHATAAEIAQRVGVSEATVFSYFRGKRELCARVIADWY
DENIATFEAGLPALAPVREQFAFIVRTHLRLMLVNGTGLCALVLSEGRARQEMLGDELSALQRRYTAPLMKVLARGQAQG
QVRADHDPLSLLRSLVFGPIEHVLWDAILGRRELDAERTAEQLIGVLWAALQPPAPDVAALAQFERDVREALGRVAGAAG
AR

Sequences:

>Translated_242_residues
MTSSPVKSERADGSRAPAGRKSQQRVQEILRAGREVFAEKGYEHATAAEIAQRVGVSEATVFSYFRGKRELCARVIADWY
DENIATFEAGLPALAPVREQFAFIVRTHLRLMLVNGTGLCALVLSEGRARQEMLGDELSALQRRYTAPLMKVLARGQAQG
QVRADHDPLSLLRSLVFGPIEHVLWDAILGRRELDAERTAEQLIGVLWAALQPPAPDVAALAQFERDVREALGRVAGAAG
AR
>Mature_241_residues
TSSPVKSERADGSRAPAGRKSQQRVQEILRAGREVFAEKGYEHATAAEIAQRVGVSEATVFSYFRGKRELCARVIADWYD
ENIATFEAGLPALAPVREQFAFIVRTHLRLMLVNGTGLCALVLSEGRARQEMLGDELSALQRRYTAPLMKVLARGQAQGQ
VRADHDPLSLLRSLVFGPIEHVLWDAILGRRELDAERTAEQLIGVLWAALQPPAPDVAALAQFERDVREALGRVAGAAGA
R

Specific function: Transcriptional regulator in fatty acid degradation. Represses transcription of genes required for fatty acid transport and beta-oxidation, including acdA, fadA, fadB, fadE, fadF, fadG, fadH, fadM, fadN, lcfA and lcfB. Binding of FadR to DNA is specifical

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647
- InterPro:   IPR013570 [H]

Pfam domain/function: PF08359 TetR_C_4; PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 26539; Mature: 26407

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSSPVKSERADGSRAPAGRKSQQRVQEILRAGREVFAEKGYEHATAAEIAQRVGVSEAT
CCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHH
VFSYFRGKRELCARVIADWYDENIATFEAGLPALAPVREQFAFIVRTHLRLMLVNGTGLC
HHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEECCCCHH
ALVLSEGRARQEMLGDELSALQRRYTAPLMKVLARGQAQGQVRADHDPLSLLRSLVFGPI
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH
EHVLWDAILGRRELDAERTAEQLIGVLWAALQPPAPDVAALAQFERDVREALGRVAGAAG
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
AR
CC
>Mature Secondary Structure 
TSSPVKSERADGSRAPAGRKSQQRVQEILRAGREVFAEKGYEHATAAEIAQRVGVSEAT
CCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHH
VFSYFRGKRELCARVIADWYDENIATFEAGLPALAPVREQFAFIVRTHLRLMLVNGTGLC
HHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEECCCCHH
ALVLSEGRARQEMLGDELSALQRRYTAPLMKVLARGQAQGQVRADHDPLSLLRSLVFGPI
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH
EHVLWDAILGRRELDAERTAEQLIGVLWAALQPPAPDVAALAQFERDVREALGRVAGAAG
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
AR
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]