| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is est [H]
Identifier: 238024519
GI number: 238024519
Start: 1436716
End: 1437567
Strand: Reverse
Name: est [H]
Synonym: bglu_2g11250
Alternate gene names: 238024519
Gene position: 1437567-1436716 (Counterclockwise)
Preceding gene: 238024520
Following gene: 238024518
Centisome position: 50.85
GC content: 71.83
Gene sequence:
>852_bases ATGTCCGGTCGCACCGGCGTCCTGCTGATCCACGGGCTGGGCGGCACCGAGTACGATCTCGGCTCGCTGCACAAGGCAAT CCGTCGGGCCGGCGGCGACGCGCACATCATCACGCTGCCGGGCCACGGCACGCGGCCCGAGGATCTGGTCGGGGTCCGTG CCGAGGCCTGGCTCGACGCCGTCACCGCGCAGTATCGCGTGCTCGAGGCCGAGTACGACACGCTGCACGTGGCGGGCATG TGCATGGGCGCGCTGGTCGCGCTGCTGCTGTGCCACCGCGTGCGTCACGCGAAGGGGCGCCTCGCGCTGCTGGCCGCGCC GGTCTACATCGACGGCTGGTCCACGCCCTGGTATCGCACGCTGCGCCACCTGCTGTATCGCGTGCCGGGCCTGACCGAGC GCATGCGCGTGGAGGAGGGCGAGCCGTTCGGCATCAAGAACCCGGTGATCCGCGCGCTCGTGAAGAAGAAGTTCGCACGC CAGGACCGCTTCCATTACCCGTGGGTGCCGCTCGCGACGATCCGCCAGGTCGACCGGATGCGCGCCTGGGTGCGCGCGGC GGCGCCCGACACGCCGTGCCCCACGCTGATCCTGCACGCGCGCGAGGACGAACTGACGAGCCTGCGCTCGGCGCGCTTCC TGGAGGCGGCGATGCCCGATGCGCGCTGCATCGTGCTCGAGAACAGCTATCACATGATTTGCGCCGATAACGACCGCGAC GCCGTCGCGCGGCATGTGCTCGCGTTCTTCGGCTTCGATCCGGCCCACGCGCAGAGCCCGGCGATGGCGCGCCGGCTGGC GCGCGGGGGCGGCTCGGACGAGGCGGCGCATGCGCTGGGCGACGCGCCATGA
Upstream 100 bases:
>100_bases CTCAGCTACGCGAACCTGGACGTGACGGTGGTGGCGGGCGTCTGGCAGATCGCGCGCGGGCCGGCCGGCGCGGCCGGCGC CTGAGCGGACGGTCCGCATC
Downstream 100 bases:
>100_bases GCGCGGGCGCCGCCACGCACCGCTTGCGCCGCTTGCGCCGCGACGGCGCCAGGCAGGCGATGCGCACTCCGCCCGCGCCA GCCGTGCTCGGCGTTGTCCG
Product: Esterase/lipase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 283; Mature: 282
Protein sequence:
>283_residues MSGRTGVLLIHGLGGTEYDLGSLHKAIRRAGGDAHIITLPGHGTRPEDLVGVRAEAWLDAVTAQYRVLEAEYDTLHVAGM CMGALVALLLCHRVRHAKGRLALLAAPVYIDGWSTPWYRTLRHLLYRVPGLTERMRVEEGEPFGIKNPVIRALVKKKFAR QDRFHYPWVPLATIRQVDRMRAWVRAAAPDTPCPTLILHAREDELTSLRSARFLEAAMPDARCIVLENSYHMICADNDRD AVARHVLAFFGFDPAHAQSPAMARRLARGGGSDEAAHALGDAP
Sequences:
>Translated_283_residues MSGRTGVLLIHGLGGTEYDLGSLHKAIRRAGGDAHIITLPGHGTRPEDLVGVRAEAWLDAVTAQYRVLEAEYDTLHVAGM CMGALVALLLCHRVRHAKGRLALLAAPVYIDGWSTPWYRTLRHLLYRVPGLTERMRVEEGEPFGIKNPVIRALVKKKFAR QDRFHYPWVPLATIRQVDRMRAWVRAAAPDTPCPTLILHAREDELTSLRSARFLEAAMPDARCIVLENSYHMICADNDRD AVARHVLAFFGFDPAHAQSPAMARRLARGGGSDEAAHALGDAP >Mature_282_residues SGRTGVLLIHGLGGTEYDLGSLHKAIRRAGGDAHIITLPGHGTRPEDLVGVRAEAWLDAVTAQYRVLEAEYDTLHVAGMC MGALVALLLCHRVRHAKGRLALLAAPVYIDGWSTPWYRTLRHLLYRVPGLTERMRVEEGEPFGIKNPVIRALVKKKFARQ DRFHYPWVPLATIRQVDRMRAWVRAAAPDTPCPTLILHAREDELTSLRSARFLEAAMPDARCIVLENSYHMICADNDRDA VARHVLAFFGFDPAHAQSPAMARRLARGGGSDEAAHALGDAP
Specific function: Involved in the detoxification of xenobiotics. Shows maximal activity with C6 substrates, with gradually decreasing activity from C8 to C12 substrates. No activity for higher chain length substrates acids rather than long-chain ones [H]
COG id: COG1647
COG function: function code R; Esterase/lipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lipase/esterase LIP3/BchO family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012354 - InterPro: IPR001375 [H]
Pfam domain/function: PF00326 Peptidase_S9 [H]
EC number: =3.1.1.1 [H]
Molecular weight: Translated: 31314; Mature: 31182
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGRTGVLLIHGLGGTEYDLGSLHKAIRRAGGDAHIITLPGHGTRPEDLVGVRAEAWLDA CCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHCCHHHHHHHH VTAQYRVLEAEYDTLHVAGMCMGALVALLLCHRVRHAKGRLALLAAPVYIDGWSTPWYRT HHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECEEEECCCCHHHHH LRHLLYRVPGLTERMRVEEGEPFGIKNPVIRALVKKKFARQDRFHYPWVPLATIRQVDRM HHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH RAWVRAAAPDTPCPTLILHAREDELTSLRSARFLEAAMPDARCIVLENSYHMICADNDRD HHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEECCCHH AVARHVLAFFGFDPAHAQSPAMARRLARGGGSDEAAHALGDAP HHHHHHHHHHCCCHHHCCCHHHHHHHHHCCCCCHHHHHCCCCC >Mature Secondary Structure SGRTGVLLIHGLGGTEYDLGSLHKAIRRAGGDAHIITLPGHGTRPEDLVGVRAEAWLDA CCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHCCHHHHHHHH VTAQYRVLEAEYDTLHVAGMCMGALVALLLCHRVRHAKGRLALLAAPVYIDGWSTPWYRT HHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECEEEECCCCHHHHH LRHLLYRVPGLTERMRVEEGEPFGIKNPVIRALVKKKFARQDRFHYPWVPLATIRQVDRM HHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH RAWVRAAAPDTPCPTLILHAREDELTSLRSARFLEAAMPDARCIVLENSYHMICADNDRD HHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEECCCHH AVARHVLAFFGFDPAHAQSPAMARRLARGGGSDEAAHALGDAP HHHHHHHHHHCCCHHHCCCHHHHHHHHHCCCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1369099 [H]