Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is 238024520

Identifier: 238024520

GI number: 238024520

Start: 1437584

End: 1438882

Strand: Reverse

Name: 238024520

Synonym: bglu_2g11260

Alternate gene names: NA

Gene position: 1438882-1437584 (Counterclockwise)

Preceding gene: 238024521

Following gene: 238024519

Centisome position: 50.89

GC content: 73.36

Gene sequence:

>1299_bases
ATGGAAATGTCTCGCCCGAGGCCGGGCGCCGTCGCCGTCGTGCTCTGGGCGGTGCTGTATCTGGTGAGCGGTCAGCTGTC
GCGTCAACTGAACGGGCCGGTCGGTCTGCCCGGCTATATCTGGCTGCCGGCCGGCGTCACGGTGGGCGCCTTCATGCTGC
GCCCGCCCGGTGAATGGCCGGTGCTGGCCGCCGCGTTTCTGGTCGCCCAGCTCGCGCTGGCCGCGGTCGAGCACGGCAGC
TACCCCGACACGCTGGTCTACGCGCTGATCGCGATCGGCTCGGCCGCGCTCGCGGTCTGGCTGGTGCGGCGCGTGCGGCT
CTCGCTGGAGGGCCTGTATTTCCTGCGCTCGATGATCTCGGCCGCGCTGCTCACCAGCCTGTTCGGCGCGCTGGCGAGCG
GGGCCTGGCGCGCGTTCATGCAGGGCTCGGCGTTGCCCGACGTCGCGTTCGTCTGGGCGGCCTCGGACTTCGTCGGCATC
CTGCTGGTCGCGCCCGTGCTGGCGTCGTGGTCACGCTTTCGCGCGCACCGCTCGGGTGACCACGAGCGCTTCGACATCGG
GCTCGGCATCGTATCGTTCGCGCTGCTGGCGGCCAGCGCCTGGGCGATCTTCGACAGCGCCGGCGCCGGCACGCCCGCCG
GCGCGATCGGCTTCGCCGCAACCTACATTCCGCTGTTCCTGACGGTGGCGGTGACGGTGCTGCTGGGCGGCCGAGCCGGC
TCGCTGTCGGTGCTGGTGCTCGCCGTGATCGTGATCCTGCAGACCGCGGACGGGGACGGGCCGTTCTCGCTGCTGGAAAC
CTCGCGCGGGCGCTCGCTGCTGGAGGCGCAGCTCTATCTGGCGGTGGCCTCGCTGCTGGTGCTGACGGTCAGCACGCTGA
AAACCGGCAACGAACGCGCCAGCGCGCGCGCCGACACGCTCGCCAGCAACATCGCGCTGGCGCTCGCGAGCGCGGACCAG
GTGGCCTACGTGCTCGATCCGGCCACCGATACGCTCGAATGGAGCGGCGACCTGCAGCGCGCGTTCGGGCCGGGCGCCGA
GGCCGCGCAACTCGCCAGCGTGGCGCGCGTGCTCGAACGGCTGGCGCCGCCCGATCGCGACACGCTGCGCCGCCACTGGC
GCGCCGGCGCGGCCGGCCAGCCGGGCGAGCCGGTGAGCTTCGGCATCGTGCAGCCGGACGGCGCGATCCTGCGCGTGACC
GACCGCGGCGCGCCGCTCAGCTACGCGAACCTGGACGTGACGGTGGTGGCGGGCGTCTGGCAGATCGCGCGCGGGCCGGC
CGGCGCGGCCGGCGCCTGA

Upstream 100 bases:

>100_bases
AAATTCGCGAAACATGCCGCCCGTGGCTGATAAATTGCGCTCCTGGCCCCGGAAACGCGCGAGAATTCGCCTCTCGTGTC
TAGCAGGTGCGGAGGAATCC

Downstream 100 bases:

>100_bases
GCGGACGGTCCGCATCATGTCCGGTCGCACCGGCGTCCTGCTGATCCACGGGCTGGGCGGCACCGAGTACGATCTCGGCT
CGCTGCACAAGGCAATCCGT

Product: putative PAS/PAC sensor protein

Products: NA

Alternate protein names: Integral Membrane Sensor Protein; PAS Fold Family Protein; PAS/PAC Sensor Protein

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MEMSRPRPGAVAVVLWAVLYLVSGQLSRQLNGPVGLPGYIWLPAGVTVGAFMLRPPGEWPVLAAAFLVAQLALAAVEHGS
YPDTLVYALIAIGSAALAVWLVRRVRLSLEGLYFLRSMISAALLTSLFGALASGAWRAFMQGSALPDVAFVWAASDFVGI
LLVAPVLASWSRFRAHRSGDHERFDIGLGIVSFALLAASAWAIFDSAGAGTPAGAIGFAATYIPLFLTVAVTVLLGGRAG
SLSVLVLAVIVILQTADGDGPFSLLETSRGRSLLEAQLYLAVASLLVLTVSTLKTGNERASARADTLASNIALALASADQ
VAYVLDPATDTLEWSGDLQRAFGPGAEAAQLASVARVLERLAPPDRDTLRRHWRAGAAGQPGEPVSFGIVQPDGAILRVT
DRGAPLSYANLDVTVVAGVWQIARGPAGAAGA

Sequences:

>Translated_432_residues
MEMSRPRPGAVAVVLWAVLYLVSGQLSRQLNGPVGLPGYIWLPAGVTVGAFMLRPPGEWPVLAAAFLVAQLALAAVEHGS
YPDTLVYALIAIGSAALAVWLVRRVRLSLEGLYFLRSMISAALLTSLFGALASGAWRAFMQGSALPDVAFVWAASDFVGI
LLVAPVLASWSRFRAHRSGDHERFDIGLGIVSFALLAASAWAIFDSAGAGTPAGAIGFAATYIPLFLTVAVTVLLGGRAG
SLSVLVLAVIVILQTADGDGPFSLLETSRGRSLLEAQLYLAVASLLVLTVSTLKTGNERASARADTLASNIALALASADQ
VAYVLDPATDTLEWSGDLQRAFGPGAEAAQLASVARVLERLAPPDRDTLRRHWRAGAAGQPGEPVSFGIVQPDGAILRVT
DRGAPLSYANLDVTVVAGVWQIARGPAGAAGA
>Mature_432_residues
MEMSRPRPGAVAVVLWAVLYLVSGQLSRQLNGPVGLPGYIWLPAGVTVGAFMLRPPGEWPVLAAAFLVAQLALAAVEHGS
YPDTLVYALIAIGSAALAVWLVRRVRLSLEGLYFLRSMISAALLTSLFGALASGAWRAFMQGSALPDVAFVWAASDFVGI
LLVAPVLASWSRFRAHRSGDHERFDIGLGIVSFALLAASAWAIFDSAGAGTPAGAIGFAATYIPLFLTVAVTVLLGGRAG
SLSVLVLAVIVILQTADGDGPFSLLETSRGRSLLEAQLYLAVASLLVLTVSTLKTGNERASARADTLASNIALALASADQ
VAYVLDPATDTLEWSGDLQRAFGPGAEAAQLASVARVLERLAPPDRDTLRRHWRAGAAGQPGEPVSFGIVQPDGAILRVT
DRGAPLSYANLDVTVVAGVWQIARGPAGAAGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44910; Mature: 44910

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: PS00123 ALKALINE_PHOSPHATASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEMSRPRPGAVAVVLWAVLYLVSGQLSRQLNGPVGLPGYIWLPAGVTVGAFMLRPPGEWP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHEEECCCCCCH
VLAAAFLVAQLALAAVEHGSYPDTLVYALIAIGSAALAVWLVRRVRLSLEGLYFLRSMIS
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AALLTSLFGALASGAWRAFMQGSALPDVAFVWAASDFVGILLVAPVLASWSRFRAHRSGD
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
HERFDIGLGIVSFALLAASAWAIFDSAGAGTPAGAIGFAATYIPLFLTVAVTVLLGGRAG
CCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
SLSVLVLAVIVILQTADGDGPFSLLETSRGRSLLEAQLYLAVASLLVLTVSTLKTGNERA
HHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
SARADTLASNIALALASADQVAYVLDPATDTLEWSGDLQRAFGPGAEAAQLASVARVLER
HHHHHHHHHHHHHHEECCCCEEEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHH
LAPPDRDTLRRHWRAGAAGQPGEPVSFGIVQPDGAILRVTDRGAPLSYANLDVTVVAGVW
HCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCEECCCCEEEHHHHH
QIARGPAGAAGA
HHHCCCCCCCCC
>Mature Secondary Structure
MEMSRPRPGAVAVVLWAVLYLVSGQLSRQLNGPVGLPGYIWLPAGVTVGAFMLRPPGEWP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHEEECCCCCCH
VLAAAFLVAQLALAAVEHGSYPDTLVYALIAIGSAALAVWLVRRVRLSLEGLYFLRSMIS
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AALLTSLFGALASGAWRAFMQGSALPDVAFVWAASDFVGILLVAPVLASWSRFRAHRSGD
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
HERFDIGLGIVSFALLAASAWAIFDSAGAGTPAGAIGFAATYIPLFLTVAVTVLLGGRAG
CCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
SLSVLVLAVIVILQTADGDGPFSLLETSRGRSLLEAQLYLAVASLLVLTVSTLKTGNERA
HHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
SARADTLASNIALALASADQVAYVLDPATDTLEWSGDLQRAFGPGAEAAQLASVARVLER
HHHHHHHHHHHHHHEECCCCEEEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHH
LAPPDRDTLRRHWRAGAAGQPGEPVSFGIVQPDGAILRVTDRGAPLSYANLDVTVVAGVW
HCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCEECCCCEEEHHHHH
QIARGPAGAAGA
HHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA