| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is pnuC [H]
Identifier: 238024517
GI number: 238024517
Start: 1433595
End: 1434206
Strand: Reverse
Name: pnuC [H]
Synonym: bglu_2g11230
Alternate gene names: 238024517
Gene position: 1434206-1433595 (Counterclockwise)
Preceding gene: 238024518
Following gene: 238024516
Centisome position: 50.73
GC content: 72.88
Gene sequence:
>612_bases ATGTCCCCCCTCGAAATCACCGGCGTGATCGTGAGCGCGCTGGCGATCTGGCTGGCCGCGCGGCGCAGCATGCTGTGCTG GCCGGTCGGGCTCGCCTCGGTCGCGCTCTACGCGTGGATCTTCTTCGATGCGCGGCTCTACTCGGACATGCTGCTGCAGG GCGCGTTCGCGCTGCTGCAGCTGTACGGCTGGTACGGCTGGCTGATGCAGCGGCGCGAGCGCGCCGGCGAGCCGGTGGCG CCGCAGCGCGGGGTGGGGCTGCGCCGGCTCGCGCCGGGGCTGGCCGCGGCCGTGGTGCTGAGCGCGCTGCTGGGCGGCGC GATGGCGCGCTGGACCGACGCCTCGCTGCCCTACGTCGACGCCACGCTGACCGCGTTCAGCCTGGTCGCGCAGTACTGGA CCGCGCGGCGCTATATTGCGTCATGGCAGCTCTGGTGCGTGGTCGATACGGTCTATGTCGGCATGTTCGTGTTCAAGGCG CTCTACCTGACGGCCGGGCTCTACGCGCTGTTCGTGGTGCTCGCCGGGATCGGCTGGCGCGACTGGGCGCGCGCGCTGGC CCGCGCCGATGCCGCGGGCGCAGCCGCGCTGCGGCCCGACGGCAGGCCATGA
Upstream 100 bases:
>100_bases GGCGACGCCTACCTGTTCCTCGGCGCGCCGCGCACGGCCCGGCTCTCGGTCACCTGCGACTTCTGATCCGGCCCGCCACG TTCTCCGGAGACGTCAACCC
Downstream 100 bases:
>100_bases GCGCCCCGTTTTCCGGAGACCCGCTGGTGACGTCCGATTCCCGCTCCGATGCCGATTGCGCGGCCGATCGCCGTGGCTCG CCCGCGCCGCGCGCCGCGCG
Product: Nicotinamide mononucleotide transporter PnuC
Products: nicotinamide nucleotide [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 202
Protein sequence:
>203_residues MSPLEITGVIVSALAIWLAARRSMLCWPVGLASVALYAWIFFDARLYSDMLLQGAFALLQLYGWYGWLMQRRERAGEPVA PQRGVGLRRLAPGLAAAVVLSALLGGAMARWTDASLPYVDATLTAFSLVAQYWTARRYIASWQLWCVVDTVYVGMFVFKA LYLTAGLYALFVVLAGIGWRDWARALARADAAGAAALRPDGRP
Sequences:
>Translated_203_residues MSPLEITGVIVSALAIWLAARRSMLCWPVGLASVALYAWIFFDARLYSDMLLQGAFALLQLYGWYGWLMQRRERAGEPVA PQRGVGLRRLAPGLAAAVVLSALLGGAMARWTDASLPYVDATLTAFSLVAQYWTARRYIASWQLWCVVDTVYVGMFVFKA LYLTAGLYALFVVLAGIGWRDWARALARADAAGAAALRPDGRP >Mature_202_residues SPLEITGVIVSALAIWLAARRSMLCWPVGLASVALYAWIFFDARLYSDMLLQGAFALLQLYGWYGWLMQRRERAGEPVAP QRGVGLRRLAPGLAAAVVLSALLGGAMARWTDASLPYVDATLTAFSLVAQYWTARRYIASWQLWCVVDTVYVGMFVFKAL YLTAGLYALFVVLAGIGWRDWARALARADAAGAAALRPDGRP
Specific function: Required for nicotinamide riboside transport across the inner membrane [H]
COG id: COG3201
COG function: function code H; Nicotinamide mononucleotide transporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nicotinamide ribonucleoside (NR) uptake permease (TC 4.B.1) family [H]
Homologues:
Organism=Escherichia coli, GI1786965, Length=207, Percent_Identity=27.536231884058, Blast_Score=66, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006419 [H]
Pfam domain/function: PF04973 NMN_transporter [H]
EC number: NA
Molecular weight: Translated: 22280; Mature: 22149
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPLEITGVIVSALAIWLAARRSMLCWPVGLASVALYAWIFFDARLYSDMLLQGAFALLQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYGWYGWLMQRRERAGEPVAPQRGVGLRRLAPGLAAAVVLSALLGGAMARWTDASLPYVD HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH ATLTAFSLVAQYWTARRYIASWQLWCVVDTVYVGMFVFKALYLTAGLYALFVVLAGIGWR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH DWARALARADAAGAAALRPDGRP HHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure SPLEITGVIVSALAIWLAARRSMLCWPVGLASVALYAWIFFDARLYSDMLLQGAFALLQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYGWYGWLMQRRERAGEPVAPQRGVGLRRLAPGLAAAVVLSALLGGAMARWTDASLPYVD HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH ATLTAFSLVAQYWTARRYIASWQLWCVVDTVYVGMFVFKALYLTAGLYALFVVLAGIGWR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH DWARALARADAAGAAALRPDGRP HHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: nicotinamide nucleotide [Periplasm] [C]
Specific reaction: nicotinamide nucleotide [Periplasm] = nicotinamide nucleotide [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2198247; 11677609 [H]