| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024516
Identifier: 238024516
GI number: 238024516
Start: 1432342
End: 1433568
Strand: Reverse
Name: 238024516
Synonym: bglu_2g11220
Alternate gene names: NA
Gene position: 1433568-1432342 (Counterclockwise)
Preceding gene: 238024517
Following gene: 238024510
Centisome position: 50.7
GC content: 74.16
Gene sequence:
>1227_bases GTGACGTCCGATTCCCGCTCCGATGCCGATTGCGCGGCCGATCGCCGTGGCTCGCCCGCGCCGCGCGCCGCGCGCCGCGA CGACGCGGCGCTCGTGCCGCCGCAGTTCACCGTGGACGGCGAGACGAACGAACGCGACTGGCCGCTGATCACGCGCGCCG AGCTGGACCGTGTGCTGGCCGCCTATCCGCGGGTGGGCGCGCTGGCCTCGCTGTCGTGGCACAGCCCGCGGCCGTTCTCG GCGGCCGTGCTGGCCACCACCGAGTCCGGCGCGGGCGTGTTCGTGAAGCGCCACCACCGCAGCCTGCGCGACGTGGCCGG GCTCGAGGAGGAGCACCGCTTCATGGCCCACCTGCGCGACCACGGCGTGCCGGTGGCCGAGGTGCTGGCCGACCGGCACG GCCGCACCGCCAGCACGCATGGCGACTGGACCTACGAGGTGCATGCCGCTTCGCCCGGGGTGGACGCCTATCGCGGCGTG ATGTCCTGGAAGCCGTTCTTCCATGCCTCGCACGCGGCCGCGGCCGGGCGCATGCTCGCCACGCTGCATCGCGCGGCGGC CGGCTTCGACGCGCCGGCGCGCGCGCTGCGGCCGCTCCTGACCAGCTTCCGGGTGCTGTCCTCGCCCGATCTGGGCGGCG CGCTCGAGGCCTGGGTGGCCGCCCAGCCGCGCCTGGCGCGCGCGCTCGAGGCACGCGCCTGGCGCGACGACGTGGAGCGC GTGATCGGGCCGTTCCACCGCGCGCTGGTGCCGTGGCTCGACACGCTGGCGCCGCTGTGGACGCATGGCGACTGGCATGC CTCGAACCTCTTGTGGACGAGCGGCGAGGCGGGCGCGCAGGTGGCGACCGTGCTCGACTTCGGGCTGGCCGACCGCAGCT GCGCGGTGCTCGACATTGCCACCGCCATCGAGCGCAACATGGTGGACTGGCTCGCGCCGGCCGGCGCGCGGCGCATCGAA TTCGAGCACCTGAGCGCGCTGCTGGACGGCTATGAATCGATCCTGCCGCTGTCCGGCGACGCGTATCGGGCACTCGCGGC GCTGCTGCCGATCGCGCATACCGAATTCGCGCTGTCCGAAGTCGAGTATTTCAACGGCATCCTGTCGTCGCCGGCCGGCA CCGAGGCCGCCTACGACACCTATCTGGTCGGCCACGCGCAGTGGTTCGCCGGCGCGGACGGGCAGCGGCTGCTCGACGCG ATCCGGGCGCGTCGGCCGGGGCGGTGA
Upstream 100 bases:
>100_bases GCGACTGGGCGCGCGCGCTGGCCCGCGCCGATGCCGCGGGCGCAGCCGCGCTGCGGCCCGACGGCAGGCCATGAGCGCCC CGTTTTCCGGAGACCCGCTG
Downstream 100 bases:
>100_bases GCGCGCGGCCTGCCGGCGAGCGAGGCCGCTTTTTGAGCGGGCCGTGCCGTGCGGCACGGGCCCGCCCGACACGCGCAGAG GCGAACGGCGAGGCGAACGG
Product: aminoglycoside phosphotransferase
Products: NA
Alternate protein names: Aminoglycoside Phospho Transferase; Secreted Protein
Number of amino acids: Translated: 408; Mature: 407
Protein sequence:
>408_residues MTSDSRSDADCAADRRGSPAPRAARRDDAALVPPQFTVDGETNERDWPLITRAELDRVLAAYPRVGALASLSWHSPRPFS AAVLATTESGAGVFVKRHHRSLRDVAGLEEEHRFMAHLRDHGVPVAEVLADRHGRTASTHGDWTYEVHAASPGVDAYRGV MSWKPFFHASHAAAAGRMLATLHRAAAGFDAPARALRPLLTSFRVLSSPDLGGALEAWVAAQPRLARALEARAWRDDVER VIGPFHRALVPWLDTLAPLWTHGDWHASNLLWTSGEAGAQVATVLDFGLADRSCAVLDIATAIERNMVDWLAPAGARRIE FEHLSALLDGYESILPLSGDAYRALAALLPIAHTEFALSEVEYFNGILSSPAGTEAAYDTYLVGHAQWFAGADGQRLLDA IRARRPGR
Sequences:
>Translated_408_residues MTSDSRSDADCAADRRGSPAPRAARRDDAALVPPQFTVDGETNERDWPLITRAELDRVLAAYPRVGALASLSWHSPRPFS AAVLATTESGAGVFVKRHHRSLRDVAGLEEEHRFMAHLRDHGVPVAEVLADRHGRTASTHGDWTYEVHAASPGVDAYRGV MSWKPFFHASHAAAAGRMLATLHRAAAGFDAPARALRPLLTSFRVLSSPDLGGALEAWVAAQPRLARALEARAWRDDVER VIGPFHRALVPWLDTLAPLWTHGDWHASNLLWTSGEAGAQVATVLDFGLADRSCAVLDIATAIERNMVDWLAPAGARRIE FEHLSALLDGYESILPLSGDAYRALAALLPIAHTEFALSEVEYFNGILSSPAGTEAAYDTYLVGHAQWFAGADGQRLLDA IRARRPGR >Mature_407_residues TSDSRSDADCAADRRGSPAPRAARRDDAALVPPQFTVDGETNERDWPLITRAELDRVLAAYPRVGALASLSWHSPRPFSA AVLATTESGAGVFVKRHHRSLRDVAGLEEEHRFMAHLRDHGVPVAEVLADRHGRTASTHGDWTYEVHAASPGVDAYRGVM SWKPFFHASHAAAAGRMLATLHRAAAGFDAPARALRPLLTSFRVLSSPDLGGALEAWVAAQPRLARALEARAWRDDVERV IGPFHRALVPWLDTLAPLWTHGDWHASNLLWTSGEAGAQVATVLDFGLADRSCAVLDIATAIERNMVDWLAPAGARRIEF EHLSALLDGYESILPLSGDAYRALAALLPIAHTEFALSEVEYFNGILSSPAGTEAAYDTYLVGHAQWFAGADGQRLLDAI RARRPGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44337; Mature: 44206
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: PS00024 HEMOPEXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSDSRSDADCAADRRGSPAPRAARRDDAALVPPQFTVDGETNERDWPLITRAELDRVLA CCCCCCCCCHHHHCCCCCCCCCCCCCCCCEECCCCEEECCCCCCCCCCEEEHHHHHHHHH AYPRVGALASLSWHSPRPFSAAVLATTESGAGVFVKRHHRSLRDVAGLEEEHRFMAHLRD HCCCCCCEEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH HGVPVAEVLADRHGRTASTHGDWTYEVHAASPGVDAYRGVMSWKPFFHASHAAAAGRMLA CCCCHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH TLHRAAAGFDAPARALRPLLTSFRVLSSPDLGGALEAWVAAQPRLARALEARAWRDDVER HHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHH VIGPFHRALVPWLDTLAPLWTHGDWHASNLLWTSGEAGAQVATVLDFGLADRSCAVLDIA HHHHHHHHHHHHHHHHHHHHCCCCEECCCEEEECCCCCCHHHHHHHHCCCCCCHHHHHHH TAIERNMVDWLAPAGARRIEFEHLSALLDGYESILPLSGDAYRALAALLPIAHTEFALSE HHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH VEYFNGILSSPAGTEAAYDTYLVGHAQWFAGADGQRLLDAIRARRPGR HHHHHHHHCCCCCCCHHHHHEEEECHHHHCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure TSDSRSDADCAADRRGSPAPRAARRDDAALVPPQFTVDGETNERDWPLITRAELDRVLA CCCCCCCCHHHHCCCCCCCCCCCCCCCCEECCCCEEECCCCCCCCCCEEEHHHHHHHHH AYPRVGALASLSWHSPRPFSAAVLATTESGAGVFVKRHHRSLRDVAGLEEEHRFMAHLRD HCCCCCCEEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH HGVPVAEVLADRHGRTASTHGDWTYEVHAASPGVDAYRGVMSWKPFFHASHAAAAGRMLA CCCCHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH TLHRAAAGFDAPARALRPLLTSFRVLSSPDLGGALEAWVAAQPRLARALEARAWRDDVER HHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHH VIGPFHRALVPWLDTLAPLWTHGDWHASNLLWTSGEAGAQVATVLDFGLADRSCAVLDIA HHHHHHHHHHHHHHHHHHHHCCCCEECCCEEEECCCCCCHHHHHHHHCCCCCCHHHHHHH TAIERNMVDWLAPAGARRIEFEHLSALLDGYESILPLSGDAYRALAALLPIAHTEFALSE HHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH VEYFNGILSSPAGTEAAYDTYLVGHAQWFAGADGQRLLDAIRARRPGR HHHHHHHHCCCCCCCHHHHHEEEECHHHHCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA