| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024510
Identifier: 238024510
GI number: 238024510
Start: 1423466
End: 1424815
Strand: Reverse
Name: 238024510
Synonym: bglu_2g11130
Alternate gene names: NA
Gene position: 1424815-1423466 (Counterclockwise)
Preceding gene: 238024516
Following gene: 238024502
Centisome position: 50.39
GC content: 66.89
Gene sequence:
>1350_bases ATGGCCGTGGCCGCCGCCTGCCTGATCGCCGTCGCCCCGGTGCGGGCGCAAAGCTCGCGCACCAGCTGGGTGGTGAGCCA GATCTACGACTACAACCATCCGTTCGCGGCCACCGACAGCACCGATCTGGCGACCAAGATGTCGGCCATGGCGGCCGATT CGTTCGCGTTTTTCCGCGGCACCGCGCATCTGTTCTATCAGGACATGCGCACGCTGCCGGCCTCGAACTACACCACCTCG CAGACCGGCCACACCTGGATCGGCGGCGACGCTCACCTCGGCAACTTCGGCGCCTGGCAAGACAGCAGCGGCAACACGGT GTTCGGCGTCGACGACTTCGACGAGGGCTACCTCGGCCAGTACGTCTGGGATCTGCGGCGCCTGGCGACCAGCATGGTGC TGGCCGGCCGCGCCAACGGCATCGCCGACAGCGACATCGCCGCCGCCATCAAGACCATGGTCGGCGCCTATGTCGGTGAG ATGGGGGACTTCAAGGGCAGCAGCGGCGAACTGAGCTTCCAGCTCAAGAGCGGCAATACCTCGGGCGTGGTGCAGTCGAC GATCGGCGACGCCAAGGGCGACAGCCGCTCGAGCCTGCTTGCCAAGTACACGCAGGTGAGCGGCGGCGCGCGCAGCTTCC GGACCATCGCCGGTAGCCTGGTGCCGGTGGACGGCACGACCTACGCCAATCTCTCGGCGGCGATGAGCAGCTACCTCAGC AGCATCGGCTCGTCGAAGCAGTATCCGGCCAGCTACTACAAGGTGAAGGACATCCGCCAGAAGCTCGGCTCGGGCGTGGG CAGCCTCGGCAGGCTGCGCTACTACCTGCTGATCGAGGGGCCGTCCTCGTCCAGCTCCGACGACGTGATCCTCGAGGCGA AGCAGGAGACGGCGAGCGCGGTGGCCGTGGCCAGCGGCAACGGGCAGGCGCTCGTCTCCGCCGACGCCGGCAACGATGCC GCGCGCGCGGCGCTGACCAACAAGGCGCAGACGCTGAACGCCGACGTGCTGGCGGGCTATGCCACGGTCAACGGCGTGAA TTACTACCTCCACGAGAAGTCCCCGTACCAGGAGGACTTCGACTACACGAAGCTGACCAGCGCGGGCAAGCTCAACACGG CGGCCGCCTATCTCGGGCAGGCGCTGGCCTCGGCGCACGCGATCTCCGATCAGGACTACGACAGCGCGATCGTGAGCTAC AGCATCGACAAGCAGGTGAGCGAGGCCGTCACGAGCACGAGCGGGTTGCAGACCGAGATCTCGAACTTCGCGTTCCGCTA TGCGGCGCAGGTGAACCTGGACTGGCAATCGTTCGTCGGCGCCTATCGGGCCGGCACGCCGCTGTATTGA
Upstream 100 bases:
>100_bases TTGTCATCCGGCACTGCTTGAATGAGCGCGCATCGACGAGGAGCGACCGAGGTCGCTCCTTTTTTCTTCATTCCGAGGAA CGCCCATGAAAACACCCTGG
Downstream 100 bases:
>100_bases AGCCGCGCTTGAAGCGGCAGCGGCGGGCTCGGGCGACTTGCACGCGGGGGGCGGCGCGGGCCGCTATCGCGCCATCGTCA CGATGGGGTCGGCACCGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 449; Mature: 448
Protein sequence:
>449_residues MAVAAACLIAVAPVRAQSSRTSWVVSQIYDYNHPFAATDSTDLATKMSAMAADSFAFFRGTAHLFYQDMRTLPASNYTTS QTGHTWIGGDAHLGNFGAWQDSSGNTVFGVDDFDEGYLGQYVWDLRRLATSMVLAGRANGIADSDIAAAIKTMVGAYVGE MGDFKGSSGELSFQLKSGNTSGVVQSTIGDAKGDSRSSLLAKYTQVSGGARSFRTIAGSLVPVDGTTYANLSAAMSSYLS SIGSSKQYPASYYKVKDIRQKLGSGVGSLGRLRYYLLIEGPSSSSSDDVILEAKQETASAVAVASGNGQALVSADAGNDA ARAALTNKAQTLNADVLAGYATVNGVNYYLHEKSPYQEDFDYTKLTSAGKLNTAAAYLGQALASAHAISDQDYDSAIVSY SIDKQVSEAVTSTSGLQTEISNFAFRYAAQVNLDWQSFVGAYRAGTPLY
Sequences:
>Translated_449_residues MAVAAACLIAVAPVRAQSSRTSWVVSQIYDYNHPFAATDSTDLATKMSAMAADSFAFFRGTAHLFYQDMRTLPASNYTTS QTGHTWIGGDAHLGNFGAWQDSSGNTVFGVDDFDEGYLGQYVWDLRRLATSMVLAGRANGIADSDIAAAIKTMVGAYVGE MGDFKGSSGELSFQLKSGNTSGVVQSTIGDAKGDSRSSLLAKYTQVSGGARSFRTIAGSLVPVDGTTYANLSAAMSSYLS SIGSSKQYPASYYKVKDIRQKLGSGVGSLGRLRYYLLIEGPSSSSSDDVILEAKQETASAVAVASGNGQALVSADAGNDA ARAALTNKAQTLNADVLAGYATVNGVNYYLHEKSPYQEDFDYTKLTSAGKLNTAAAYLGQALASAHAISDQDYDSAIVSY SIDKQVSEAVTSTSGLQTEISNFAFRYAAQVNLDWQSFVGAYRAGTPLY >Mature_448_residues AVAAACLIAVAPVRAQSSRTSWVVSQIYDYNHPFAATDSTDLATKMSAMAADSFAFFRGTAHLFYQDMRTLPASNYTTSQ TGHTWIGGDAHLGNFGAWQDSSGNTVFGVDDFDEGYLGQYVWDLRRLATSMVLAGRANGIADSDIAAAIKTMVGAYVGEM GDFKGSSGELSFQLKSGNTSGVVQSTIGDAKGDSRSSLLAKYTQVSGGARSFRTIAGSLVPVDGTTYANLSAAMSSYLSS IGSSKQYPASYYKVKDIRQKLGSGVGSLGRLRYYLLIEGPSSSSSDDVILEAKQETASAVAVASGNGQALVSADAGNDAA RAALTNKAQTLNADVLAGYATVNGVNYYLHEKSPYQEDFDYTKLTSAGKLNTAAAYLGQALASAHAISDQDYDSAIVSYS IDKQVSEAVTSTSGLQTEISNFAFRYAAQVNLDWQSFVGAYRAGTPLY
Specific function: Unknown
COG id: COG4320
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47376; Mature: 47244
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVAAACLIAVAPVRAQSSRTSWVVSQIYDYNHPFAATDSTDLATKMSAMAADSFAFFRG CHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH TAHLFYQDMRTLPASNYTTSQTGHTWIGGDAHLGNFGAWQDSSGNTVFGVDDFDEGYLGQ HHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHH YVWDLRRLATSMVLAGRANGIADSDIAAAIKTMVGAYVGEMGDFKGSSGELSFQLKSGNT HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCC SGVVQSTIGDAKGDSRSSLLAKYTQVSGGARSFRTIAGSLVPVDGTTYANLSAAMSSYLS CCEEHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCEEECCCCCHHHHHHHHHHHHH SIGSSKQYPASYYKVKDIRQKLGSGVGSLGRLRYYLLIEGPSSSSSDDVILEAKQETASA HHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCEEEEECCCCCCE VAVASGNGQALVSADAGNDAARAALTNKAQTLNADVLAGYATVNGVNYYLHEKSPYQEDF EEEECCCCCEEEEECCCCHHHHHHHHCCHHHCCHHHEEEEEEECCEEEEEECCCCCCCCC DYTKLTSAGKLNTAAAYLGQALASAHAISDQDYDSAIVSYSIDKQVSEAVTSTSGLQTEI CHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHCCCCHHHH SNFAFRYAAQVNLDWQSFVGAYRAGTPLY HHHHEEEEEEECCCHHHHHHHHCCCCCCC >Mature Secondary Structure AVAAACLIAVAPVRAQSSRTSWVVSQIYDYNHPFAATDSTDLATKMSAMAADSFAFFRG HHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH TAHLFYQDMRTLPASNYTTSQTGHTWIGGDAHLGNFGAWQDSSGNTVFGVDDFDEGYLGQ HHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHH YVWDLRRLATSMVLAGRANGIADSDIAAAIKTMVGAYVGEMGDFKGSSGELSFQLKSGNT HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCC SGVVQSTIGDAKGDSRSSLLAKYTQVSGGARSFRTIAGSLVPVDGTTYANLSAAMSSYLS CCEEHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCEEECCCCCHHHHHHHHHHHHH SIGSSKQYPASYYKVKDIRQKLGSGVGSLGRLRYYLLIEGPSSSSSDDVILEAKQETASA HHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCEEEEECCCCCCE VAVASGNGQALVSADAGNDAARAALTNKAQTLNADVLAGYATVNGVNYYLHEKSPYQEDF EEEECCCCCEEEEECCCCHHHHHHHHCCHHHCCHHHEEEEEEECCEEEEEECCCCCCCCC DYTKLTSAGKLNTAAAYLGQALASAHAISDQDYDSAIVSYSIDKQVSEAVTSTSGLQTEI CHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHCCCCHHHH SNFAFRYAAQVNLDWQSFVGAYRAGTPLY HHHHEEEEEEECCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA