| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is cbbT [H]
Identifier: 238024478
GI number: 238024478
Start: 1371846
End: 1373882
Strand: Reverse
Name: cbbT [H]
Synonym: bglu_2g10740
Alternate gene names: 238024478
Gene position: 1373882-1371846 (Counterclockwise)
Preceding gene: 238024480
Following gene: 238024477
Centisome position: 48.59
GC content: 70.94
Gene sequence:
>2037_bases ATGAGCATGACTTCCCCCCCGAAAAGCGTCCCCGCCCCGCGCGATCCGCAGCTGCGCGAGATGGCGAACTGCATCCGTTT CCTGTCGATGGACGCGGTCCAGCAAGCCAACAGCGGCCATCCCGGCGCGCCGATGGGCATGGCCGACATCGCCACCGTGC TGCTCCGCGACTTCATGCGCTTCGACGCAGCCGATCCGCACTGGCTCGACCGCGACCGCTTCGTGCTGTCGAACGGCCAT GCCTCGATGCTGCTCTACAGCCTGCTCTACCTGACCGGCTATGCCGACATGCCGCTCGAGCAGCTCGAGCGGTTCCGCCA GGTGGGCAGCAGGACGCCGGGCCATCCCGAGTACCGCCACGCGGACGGCATCGAGCTGACCACCGGGCCGCTCGGCCAGG GCATCGCCGAATCGGTCGGCATGGCGCTGGCCGAACGGGTCCTGAACGCGCGCTTCGGCGACGAGCTGGTCGATCACTAC ACCTACGTGTTCCTCGGCGACGGCTGCCTGATGGAAGGCGTCAGCCAGGAGGCAATCTCGCTGGCCGGCCACCTGAAGCT CGACAGGCTGATCGCGTTCTGGGACAACAATTCGATCTCGATCGACGGCCCGACCACGCTGGCCGTCTCCGACAACGAGG TCGAGCGCTTTCGTGCCTCGGGCTGGCGCGTGCTCGAGATCGACGGCCACGACACCGACGCGATCCACGGCGCGATCGCC ACCGCGCGCGAGCCGAGCGGCCAGCCGACGCTGATCGCCTGCCGCACCATCATCGGCTTCGGCTTCCCGACCCGCGCCGG CACTCAGAAGGCGCACAGCGACGCGCCCGGCGCCGAGGAGATCGCCGGCGCGCGCCAGCTGCTGGGCTGGCATTCGCCGC CGTTCGAGATCCCCGCGCCGCTGCTGAAGGCATGGCGCGAGATCGGCGCGAAGGGGCGCGAGGCAAGGCTCGCCTGGGCC GACCGCGTGAAGCAGGCGCCCGATGCACTGCGCGAGGAATTCGAGCGGCGCAACGAAGGCCGGCTGCCGCCCGACTGGAA GGCCGCGATCGCCGCCGCGCGCGACGCCTTCACGGCGAGCGGCGACGAGATGGCCACCCGCAAGGCCAGCGGCACGGTGC TCGACCACCTGTTCGACGCGATTCCCGAACTGCTCGGCGGCTCGGCCGACCTGACGCCGTCGAACAACACCAGGGCGAAG CACCAGACCGAGATCGGCCCGGGCCGCTATGACGGCGCCTACGTCCACTACGGCGTGCGCGAGCACGGTATGGCCGCCGC CATGAACGGCATTGCGCTGCACGGCGGCCTGATCCCGTATGGCGGCACCTTCCTCTGCTTTTCCGACTATTGCCGCCCGG CCATCCGGCTCGCCGCGATGATGCAGGTGCGCACCATCTTCGTCATGACGCACGACTCGATCGGGCTCGGCGAGGACGGC CCGACGCACCAGCCGGTCGAGCATCTGGCCGCGCTGCGCGCGATCCCGCACCTGGGCGTCTATCGCCCCGCCGACCCGGT GGAGACGGCCGAGTGCTGGGAGCTGATCCTCGATCAGCCGCGCCGCGCCGCGCTGATCGCGCTGTCGCGCCAGCCGGTGC CGCTGCTGCGCAAGGAAGGCGGCACGGAGAACCGCTCTGCGCGCGGCGCCTACGTGCTGCACGAGGCCGAGGGCGGCCCG CGCCGGCTCACGCTGCTGGCCACCGGCTCGGAGCTGCAGCTGGCCGTGCAGGCGCGCGAGCGCCTGCAGCGCGAAGGCGT GCCGACCGCCGTGGTGTCGATGCCGTGCCGGCTGCTGTTCGAGGAACAGGACGCGTCCTACCGGCGCGCGGTGCTCGGCG ACACGCCGGCGCGCGTGGCCGTGGAGGCCGCCGTCGAACTGGGCTGGGAACGCTATCTCGGGCCGCAGGGGCGCTTCGTC GGCATGCACGGCTTCGGCGAGTCGGGCAAGATGCAGGACCTGTACGAGAAGTTCGGCATCACCGTGGAGGCGGTCGTGAA GGCCGCGCGCGAGGTGATCCGCGACGTCGAGGGCTGA
Upstream 100 bases:
>100_bases CGACCGGATCGACCGCAAACCGCCACCGCACCGCGCGTGGTAGCGTGCATCGACCTCAGGCCGCCGCGCCCACCGCCACC CATCCCATGAGGGCCATCGC
Downstream 100 bases:
>100_bases GGCGCGGGCGACCGGCGGCGCGAGGCGCCGCCACGCCGGCCACGCGCCACCCACCGCCCTTGCGCGACCTGCGCGAGGAC CCGTTCGAACCATTCGAATC
Product: transketolase
Products: NA
Alternate protein names: TK [H]
Number of amino acids: Translated: 678; Mature: 677
Protein sequence:
>678_residues MSMTSPPKSVPAPRDPQLREMANCIRFLSMDAVQQANSGHPGAPMGMADIATVLLRDFMRFDAADPHWLDRDRFVLSNGH ASMLLYSLLYLTGYADMPLEQLERFRQVGSRTPGHPEYRHADGIELTTGPLGQGIAESVGMALAERVLNARFGDELVDHY TYVFLGDGCLMEGVSQEAISLAGHLKLDRLIAFWDNNSISIDGPTTLAVSDNEVERFRASGWRVLEIDGHDTDAIHGAIA TAREPSGQPTLIACRTIIGFGFPTRAGTQKAHSDAPGAEEIAGARQLLGWHSPPFEIPAPLLKAWREIGAKGREARLAWA DRVKQAPDALREEFERRNEGRLPPDWKAAIAAARDAFTASGDEMATRKASGTVLDHLFDAIPELLGGSADLTPSNNTRAK HQTEIGPGRYDGAYVHYGVREHGMAAAMNGIALHGGLIPYGGTFLCFSDYCRPAIRLAAMMQVRTIFVMTHDSIGLGEDG PTHQPVEHLAALRAIPHLGVYRPADPVETAECWELILDQPRRAALIALSRQPVPLLRKEGGTENRSARGAYVLHEAEGGP RRLTLLATGSELQLAVQARERLQREGVPTAVVSMPCRLLFEEQDASYRRAVLGDTPARVAVEAAVELGWERYLGPQGRFV GMHGFGESGKMQDLYEKFGITVEAVVKAAREVIRDVEG
Sequences:
>Translated_678_residues MSMTSPPKSVPAPRDPQLREMANCIRFLSMDAVQQANSGHPGAPMGMADIATVLLRDFMRFDAADPHWLDRDRFVLSNGH ASMLLYSLLYLTGYADMPLEQLERFRQVGSRTPGHPEYRHADGIELTTGPLGQGIAESVGMALAERVLNARFGDELVDHY TYVFLGDGCLMEGVSQEAISLAGHLKLDRLIAFWDNNSISIDGPTTLAVSDNEVERFRASGWRVLEIDGHDTDAIHGAIA TAREPSGQPTLIACRTIIGFGFPTRAGTQKAHSDAPGAEEIAGARQLLGWHSPPFEIPAPLLKAWREIGAKGREARLAWA DRVKQAPDALREEFERRNEGRLPPDWKAAIAAARDAFTASGDEMATRKASGTVLDHLFDAIPELLGGSADLTPSNNTRAK HQTEIGPGRYDGAYVHYGVREHGMAAAMNGIALHGGLIPYGGTFLCFSDYCRPAIRLAAMMQVRTIFVMTHDSIGLGEDG PTHQPVEHLAALRAIPHLGVYRPADPVETAECWELILDQPRRAALIALSRQPVPLLRKEGGTENRSARGAYVLHEAEGGP RRLTLLATGSELQLAVQARERLQREGVPTAVVSMPCRLLFEEQDASYRRAVLGDTPARVAVEAAVELGWERYLGPQGRFV GMHGFGESGKMQDLYEKFGITVEAVVKAAREVIRDVEG >Mature_677_residues SMTSPPKSVPAPRDPQLREMANCIRFLSMDAVQQANSGHPGAPMGMADIATVLLRDFMRFDAADPHWLDRDRFVLSNGHA SMLLYSLLYLTGYADMPLEQLERFRQVGSRTPGHPEYRHADGIELTTGPLGQGIAESVGMALAERVLNARFGDELVDHYT YVFLGDGCLMEGVSQEAISLAGHLKLDRLIAFWDNNSISIDGPTTLAVSDNEVERFRASGWRVLEIDGHDTDAIHGAIAT AREPSGQPTLIACRTIIGFGFPTRAGTQKAHSDAPGAEEIAGARQLLGWHSPPFEIPAPLLKAWREIGAKGREARLAWAD RVKQAPDALREEFERRNEGRLPPDWKAAIAAARDAFTASGDEMATRKASGTVLDHLFDAIPELLGGSADLTPSNNTRAKH QTEIGPGRYDGAYVHYGVREHGMAAAMNGIALHGGLIPYGGTFLCFSDYCRPAIRLAAMMQVRTIFVMTHDSIGLGEDGP THQPVEHLAALRAIPHLGVYRPADPVETAECWELILDQPRRAALIALSRQPVPLLRKEGGTENRSARGAYVLHEAEGGPR RLTLLATGSELQLAVQARERLQREGVPTAVVSMPCRLLFEEQDASYRRAVLGDTPARVAVEAAVELGWERYLGPQGRFVG MHGFGESGKMQDLYEKFGITVEAVVKAAREVIRDVEG
Specific function: Unknown
COG id: COG0021
COG function: function code G; Transketolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transketolase family [H]
Homologues:
Organism=Homo sapiens, GI205277463, Length=671, Percent_Identity=27.123695976155, Blast_Score=187, Evalue=3e-47, Organism=Homo sapiens, GI4507521, Length=671, Percent_Identity=27.123695976155, Blast_Score=187, Evalue=3e-47, Organism=Homo sapiens, GI133778974, Length=668, Percent_Identity=24.8502994011976, Blast_Score=157, Evalue=4e-38, Organism=Escherichia coli, GI1788808, Length=665, Percent_Identity=51.5789473684211, Blast_Score=652, Evalue=0.0, Organism=Escherichia coli, GI48994911, Length=663, Percent_Identity=50.0754147812971, Blast_Score=634, Evalue=0.0, Organism=Caenorhabditis elegans, GI17539652, Length=579, Percent_Identity=27.6338514680484, Blast_Score=192, Evalue=4e-49, Organism=Saccharomyces cerevisiae, GI6325331, Length=673, Percent_Identity=43.6849925705795, Blast_Score=517, Evalue=1e-147, Organism=Saccharomyces cerevisiae, GI6319593, Length=673, Percent_Identity=41.4561664190193, Blast_Score=496, Evalue=1e-141, Organism=Drosophila melanogaster, GI45551847, Length=674, Percent_Identity=26.5578635014837, Blast_Score=186, Evalue=5e-47, Organism=Drosophila melanogaster, GI45550715, Length=674, Percent_Identity=26.5578635014837, Blast_Score=186, Evalue=5e-47, Organism=Drosophila melanogaster, GI24666278, Length=502, Percent_Identity=28.2868525896414, Blast_Score=173, Evalue=4e-43, Organism=Drosophila melanogaster, GI24645119, Length=640, Percent_Identity=26.09375, Blast_Score=161, Evalue=1e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005475 - InterPro: IPR005478 - InterPro: IPR020826 - InterPro: IPR005476 - InterPro: IPR005474 [H]
Pfam domain/function: PF02779 Transket_pyr; PF02780 Transketolase_C; PF00456 Transketolase_N [H]
EC number: =2.2.1.1 [H]
Molecular weight: Translated: 74015; Mature: 73884
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: PS00801 TRANSKETOLASE_1 ; PS00802 TRANSKETOLASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMTSPPKSVPAPRDPQLREMANCIRFLSMDAVQQANSGHPGAPMGMADIATVLLRDFMR CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH FDAADPHWLDRDRFVLSNGHASMLLYSLLYLTGYADMPLEQLERFRQVGSRTPGHPEYRH HCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCC ADGIELTTGPLGQGIAESVGMALAERVLNARFGDELVDHYTYVFLGDGCLMEGVSQEAIS CCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHCCHHHHHH LAGHLKLDRLIAFWDNNSISIDGPTTLAVSDNEVERFRASGWRVLEIDGHDTDAIHGAIA HHHHHCEEHEEEEECCCEEEECCCEEEEECCCHHHHHHHCCCEEEEECCCCCHHHHHHHH TAREPSGQPTLIACRTIIGFGFPTRAGTQKAHSDAPGAEEIAGARQLLGWHSPPFEIPAP HCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHH LLKAWREIGAKGREARLAWADRVKQAPDALREEFERRNEGRLPPDWKAAIAAARDAFTAS HHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC GDEMATRKASGTVLDHLFDAIPELLGGSADLTPSNNTRAKHQTEIGPGRYDGAYVHYGVR CHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHH EHGMAAAMNGIALHGGLIPYGGTFLCFSDYCRPAIRLAAMMQVRTIFVMTHDSIGLGEDG HCCHHHHHCCEEEECCCCCCCCEEEEHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCC PTHQPVEHLAALRAIPHLGVYRPADPVETAECWELILDQPRRAALIALSRQPVPLLRKEG CCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHCC GTENRSARGAYVLHEAEGGPRRLTLLATGSELQLAVQARERLQREGVPTAVVSMPCRLLF CCCCCCCCCEEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHCHHHEE EEQDASYRRAVLGDTPARVAVEAAVELGWERYLGPQGRFVGMHGFGESGKMQDLYEKFGI ECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHCC TVEAVVKAAREVIRDVEG CHHHHHHHHHHHHHHCCC >Mature Secondary Structure SMTSPPKSVPAPRDPQLREMANCIRFLSMDAVQQANSGHPGAPMGMADIATVLLRDFMR CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH FDAADPHWLDRDRFVLSNGHASMLLYSLLYLTGYADMPLEQLERFRQVGSRTPGHPEYRH HCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCC ADGIELTTGPLGQGIAESVGMALAERVLNARFGDELVDHYTYVFLGDGCLMEGVSQEAIS CCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHCCHHHHHH LAGHLKLDRLIAFWDNNSISIDGPTTLAVSDNEVERFRASGWRVLEIDGHDTDAIHGAIA HHHHHCEEHEEEEECCCEEEECCCEEEEECCCHHHHHHHCCCEEEEECCCCCHHHHHHHH TAREPSGQPTLIACRTIIGFGFPTRAGTQKAHSDAPGAEEIAGARQLLGWHSPPFEIPAP HCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHH LLKAWREIGAKGREARLAWADRVKQAPDALREEFERRNEGRLPPDWKAAIAAARDAFTAS HHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC GDEMATRKASGTVLDHLFDAIPELLGGSADLTPSNNTRAKHQTEIGPGRYDGAYVHYGVR CHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHH EHGMAAAMNGIALHGGLIPYGGTFLCFSDYCRPAIRLAAMMQVRTIFVMTHDSIGLGEDG HCCHHHHHCCEEEECCCCCCCCEEEEHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCC PTHQPVEHLAALRAIPHLGVYRPADPVETAECWELILDQPRRAALIALSRQPVPLLRKEG CCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHCC GTENRSARGAYVLHEAEGGPRRLTLLATGSELQLAVQARERLQREGVPTAVVSMPCRLLF CCCCCCCCCEEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHCHHHEE EEQDASYRRAVLGDTPARVAVEAAVELGWERYLGPQGRFVGMHGFGESGKMQDLYEKFGI ECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHCC TVEAVVKAAREVIRDVEG CHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA