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The map label for this gene is shp [H]

Identifier: 238024477

GI number: 238024477

Start: 1370865

End: 1371296

Strand: Reverse

Name: shp [H]

Synonym: bglu_2g10730

Alternate gene names: 238024477

Gene position: 1371296-1370865 (Counterclockwise)

Preceding gene: 238024478

Following gene: 238024476

Centisome position: 48.5

GC content: 67.13

Gene sequence:

>432_bases
GTGGAAGGATTCGCGCTGCTCGGGGCCGGGCGCCGCGGCGCACTGGGTTCGCTCTACCTCTGCGGCTTGGTCGCCGCCGC
CGGTGTCTCAGCCGCTTACGGAGCATCTCCCGCGCAAATCCTGAACGGCTACGCCGCCCAGTCGGGGAGCGAGCCCATTG
CGTCGCGAGGCCAACAGTTCTTCACCGCCCGGCATGGCCGTGAATGGGCTTGTGCGACTTGCCATGGCGCGATGCCGACC
GGCAAGGGACAACACGCAGCCACCGGCAAAACGATTGCGCCGCTTGCGCCGGCGTTCAATCCGGAGCGCTTCACGGACGC
GGCAAAGACGGAAAAGTGGTTCCGCCGCAATTGCGGGGATGTGGTCGGGCGCGAGTGCACGGCGTCGGAGAAGGCCGACA
TCCTGAGCTGGCTGATGACGCTCAGGCCATAG

Upstream 100 bases:

>100_bases
CGATTGCGGCCCGCCAAGCAGCAGCGCCGCCGCCGGGAATGGACTTGCTACCGGCGTCGAGAAGCCGCTCAGGCAGCCGC
CTGAACATGAAACACATCTG

Downstream 100 bases:

>100_bases
CGGCGCCTGCGCGATCCACATCGACGACTTCGCTGGTGACAGCACCATGAGAATCCGACTCGCCACGGTGATTACCGCAT
CCACGACACTGGCCGCGGCC

Product: cytochrome c553

Products: NA

Alternate protein names: Oxygen-binding heme protein; Sphaeroides heme protein [H]

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MEGFALLGAGRRGALGSLYLCGLVAAAGVSAAYGASPAQILNGYAAQSGSEPIASRGQQFFTARHGREWACATCHGAMPT
GKGQHAATGKTIAPLAPAFNPERFTDAAKTEKWFRRNCGDVVGRECTASEKADILSWLMTLRP

Sequences:

>Translated_143_residues
MEGFALLGAGRRGALGSLYLCGLVAAAGVSAAYGASPAQILNGYAAQSGSEPIASRGQQFFTARHGREWACATCHGAMPT
GKGQHAATGKTIAPLAPAFNPERFTDAAKTEKWFRRNCGDVVGRECTASEKADILSWLMTLRP
>Mature_143_residues
MEGFALLGAGRRGALGSLYLCGLVAAAGVSAAYGASPAQILNGYAAQSGSEPIASRGQQFFTARHGREWACATCHGAMPT
GKGQHAATGKTIAPLAPAFNPERFTDAAKTEKWFRRNCGDVVGRECTASEKADILSWLMTLRP

Specific function: High-spin cytochrome. Transiently bind oxygen during autoxidation, which occurs with a half-life of 3 min with a 4-fold excess of O(2). Also binds carbon monoxide, azide and cyanide [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR015170 [H]

Pfam domain/function: PF09086 DUF1924 [H]

EC number: NA

Molecular weight: Translated: 14960; Mature: 14960

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGFALLGAGRRGALGSLYLCGLVAAAGVSAAYGASPAQILNGYAAQSGSEPIASRGQQF
CCCCEEECCCCCCCHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHH
FTARHGREWACATCHGAMPTGKGQHAATGKTIAPLAPAFNPERFTDAAKTEKWFRRNCGD
HHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
VVGRECTASEKADILSWLMTLRP
HHCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEGFALLGAGRRGALGSLYLCGLVAAAGVSAAYGASPAQILNGYAAQSGSEPIASRGQQF
CCCCEEECCCCCCCHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHH
FTARHGREWACATCHGAMPTGKGQHAATGKTIAPLAPAFNPERFTDAAKTEKWFRRNCGD
HHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
VVGRECTASEKADILSWLMTLRP
HHCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9558336; 10821858 [H]