| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is prsA [H]
Identifier: 238024473
GI number: 238024473
Start: 1365081
End: 1365917
Strand: Direct
Name: prsA [H]
Synonym: bglu_2g10690
Alternate gene names: 238024473
Gene position: 1365081-1365917 (Clockwise)
Preceding gene: 238024472
Following gene: 238024474
Centisome position: 48.28
GC content: 56.15
Gene sequence:
>837_bases ATGATAATGATTAGATATCCGAAAGCGTCGGCGAATTTCGCGGCGCTCGCAGCGGCGTTGTTCTGCGCCGCCACGGCAAC TGCCGGGCAGCAAAATCCTGGCCAGGGCCCGGCTGCTGCCGCGGCTGCCGCGCCGGCAGTCAGTGTGTCTCACGCAGCCC AGCAGCCGGCAGACGAGAATAACAACTCCGATGAAAGTGTGTCTGCGCAGGACGAAGTCAAGCTGACCGGAAAGTTTGCC GCCCTGGCGCGTGCCAAGGGGCTTGACAAGGACCCGCGAGTCAAGCAGGCGATCGCGATGTTCACGGATAAAATTCTGGC GGACGCCTACAAAGATTATTTCATGCGGCAGATAACGCCGAGCGAGGCCGAAATAAGCGCTTATTACAACAAGCATAAAA GCGACTACAACCTCTATTCACTATCCCACATTCTGGTGAAATTCGAAAAGGATCCGTCGAATTTGCCTGCCGAACAAGCC AAAAAAATCGAGGCCCAAGCCTTCAACAAGGCTCAGGCGATCGAGGCGCGCCTCAAGGCGGGAGCGGATTTCCACGAACT GGCCGCCCAGCTGTCCGACGATGCCAACAGCCGAATCGACGGCGGACGCGTTCCGGAAACGATGGCCAGATTCCTGGCGC CTGCCTTCAAACCCGAAATCCTGGCGGCCAAGCAGGGCGACATCACGCCTCCTCTCAAGAGCTCTTTCGGGTATCACATC ATCATGGTCGAAGGGGTGGTGCCGAGCGATATGGCTCGAAATCGCGCAGATGTCATCAACGACATAAGGGAGGGCAAACT GGCAGAAAAGCAAATTTCATTAACTTCATCAAAATAA
Upstream 100 bases:
>100_bases TTTATTAGAATCAATACGGCAAAAGAGTGCTGACTCAAAGAAATCGATAACTTAAAGATGGCGCTGGCGTGGCGCGAGCG CCAACTTACATTGGGGCGTA
Downstream 100 bases:
>100_bases AAGGATTGCTTTAAAAATTTGAATCAGATGGGTAGTGTTTGGCAAGTCAATCAAATTAATCCAGTACAGGCCGCGACGAC TATGAACATCAGAAAACTTG
Product: PpiC-type peptidyl-prolyl cis-trans isomerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MIMIRYPKASANFAALAAALFCAATATAGQQNPGQGPAAAAAAAPAVSVSHAAQQPADENNNSDESVSAQDEVKLTGKFA ALARAKGLDKDPRVKQAIAMFTDKILADAYKDYFMRQITPSEAEISAYYNKHKSDYNLYSLSHILVKFEKDPSNLPAEQA KKIEAQAFNKAQAIEARLKAGADFHELAAQLSDDANSRIDGGRVPETMARFLAPAFKPEILAAKQGDITPPLKSSFGYHI IMVEGVVPSDMARNRADVINDIREGKLAEKQISLTSSK
Sequences:
>Translated_278_residues MIMIRYPKASANFAALAAALFCAATATAGQQNPGQGPAAAAAAAPAVSVSHAAQQPADENNNSDESVSAQDEVKLTGKFA ALARAKGLDKDPRVKQAIAMFTDKILADAYKDYFMRQITPSEAEISAYYNKHKSDYNLYSLSHILVKFEKDPSNLPAEQA KKIEAQAFNKAQAIEARLKAGADFHELAAQLSDDANSRIDGGRVPETMARFLAPAFKPEILAAKQGDITPPLKSSFGYHI IMVEGVVPSDMARNRADVINDIREGKLAEKQISLTSSK >Mature_278_residues MIMIRYPKASANFAALAAALFCAATATAGQQNPGQGPAAAAAAAPAVSVSHAAQQPADENNNSDESVSAQDEVKLTGKFA ALARAKGLDKDPRVKQAIAMFTDKILADAYKDYFMRQITPSEAEISAYYNKHKSDYNLYSLSHILVKFEKDPSNLPAEQA KKIEAQAFNKAQAIEARLKAGADFHELAAQLSDDANSRIDGGRVPETMARFLAPAFKPEILAAKQGDITPPLKSSFGYHI IMVEGVVPSDMARNRADVINDIREGKLAEKQISLTSSK
Specific function: Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins [H]
COG id: COG0760
COG function: function code O; Parvulin-like peptidyl-prolyl isomerase
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PpiC domain [H]
Homologues:
None
Paralogues:
None
Copy number: 400 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 160 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023059 - InterPro: IPR000297 - InterPro: IPR023058 - InterPro: IPR015391 - InterPro: IPR008880 [H]
Pfam domain/function: PF00639 Rotamase; PF09312 SurA_N [H]
EC number: =5.2.1.8 [H]
Molecular weight: Translated: 29869; Mature: 29869
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: PS50198 PPIC_PPIASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIMIRYPKASANFAALAAALFCAATATAGQQNPGQGPAAAAAAAPAVSVSHAAQQPADEN CEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHHCCCCCCC NNSDESVSAQDEVKLTGKFAALARAKGLDKDPRVKQAIAMFTDKILADAYKDYFMRQITP CCCCCCCCCCHHEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SEAEISAYYNKHKSDYNLYSLSHILVKFEKDPSNLPAEQAKKIEAQAFNKAQAIEARLKA CHHHHHHHHHHCCCCCCHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC GADFHELAAQLSDDANSRIDGGRVPETMARFLAPAFKPEILAAKQGDITPPLKSSFGYHI CCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCHHEECCCCCCCCCHHHCCCEEE IMVEGVVPSDMARNRADVINDIREGKLAEKQISLTSSK EEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC >Mature Secondary Structure MIMIRYPKASANFAALAAALFCAATATAGQQNPGQGPAAAAAAAPAVSVSHAAQQPADEN CEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHHCCCCCCC NNSDESVSAQDEVKLTGKFAALARAKGLDKDPRVKQAIAMFTDKILADAYKDYFMRQITP CCCCCCCCCCHHEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SEAEISAYYNKHKSDYNLYSLSHILVKFEKDPSNLPAEQAKKIEAQAFNKAQAIEARLKA CHHHHHHHHHHCCCCCCHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC GADFHELAAQLSDDANSRIDGGRVPETMARFLAPAFKPEILAAKQGDITPPLKSSFGYHI CCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCHHEECCCCCCCCCHHHCCCEEE IMVEGVVPSDMARNRADVINDIREGKLAEKQISLTSSK EEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11997336 [H]