| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024472
Identifier: 238024472
GI number: 238024472
Start: 1363586
End: 1364608
Strand: Direct
Name: 238024472
Synonym: bglu_2g10680
Alternate gene names: NA
Gene position: 1363586-1364608 (Clockwise)
Preceding gene: 238024471
Following gene: 238024473
Centisome position: 48.23
GC content: 68.91
Gene sequence:
>1023_bases ATGTCTTCCAGTTTGACACTTGAGCTCGCCGATCGCTTCTGCCGCCTGACGCTTGGCCATGTCACGCGCGAGTACCCTTA CAGCCCGGGCCACGTCTGGTCGGGGCCGGACGACGGCGGTACGCCGCGGCAGCTTCACCCGGTGTTCTTCGGCAGCTTCG ACTGGCACTCGTGCGTGCACGGCTATTGGCTGCTCGCCCGGCTGCTGCGCGAGTTTCCCGGCCTCGATGCCGGGCCGCGG ATTCGCGCGCTGTTCGACGCCTCGCTGACAGCCCCGAAGGTCGCGCAGGAATGCGAGTACTTCGGCGATCCGCTGAGGCA GAACTTCGAAAGGCCTTATGGCTGGGCGTGGCTGCTCAAGCTGGGCGCGGAGCTCGGCGCTCACCGCGACGCCGGCTGGG CGCAGGCGCTGGCGCCGTTGGCGCGGCTGATCCGGGAGCGCTTCGAGGGGTTCCTGGCCAAGGCGACCTATCCGAATCGG GACGGCACGCACCACAACACGGCATTCGCCGTTCGCCTCGCGCTCGATTACGCGGACGCCGTCGGCGATGCCGCGTTCAG GGCACAACTGGCCGCGGCGGCCAAGCGCTGGTATGGCGACGATGCAGACTGTCCGGCCTGGGGGGAGCCGAGCCTCGACG ATTTTCTCTCTGCCTGCCTGATGGAGGCCGAGTGCATGCGGCGCGCCTTGGAGGCCGACGAATTCGCCGCCTGGTTCGCG CGCTTCCTGCCGCGGCTGACCGCGAGTCAGCCGTCGCGCCTGTTCACTCCGGCTCTCGTGAGCGATCACGCCGATGGCCG CATCACCCATCTCAATGGGCTGAACCTGAGCCGGGCCTGGTGCTTTCGCTCGCTCGCGAGCTCGCTGCCGCAGGACGACG CGCGCGCGCGGCTGATGCGCGAGGCGGCGCACCGGCATGGGGTCGCCGCCTTGCCGCATATCGGCGGCAACTACATGGCG GAGCATTGGCTCGCCACCTACGCGGTGCTGATGCTTACCGTCGATGGGGCAGCCGGCGCCTGA
Upstream 100 bases:
>100_bases CACGACTTGCAGCTGGAAGTCGCCCCCGTCAGGGTGGTCGACGAAGTCGCGAAGCGTCTGGAGCAGTACTGCAGATCCGC CTGATCCGATCGGAACTACC
Downstream 100 bases:
>100_bases CGGCAGCATGCGCGCCACCGGCGCGTGCCGGCCGCCGCCTGCCCCGCAGACGGGAACGGCGCAAGGGAATCGGGCAGCTC GCGTGCGCGCCTGCCGAACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MSSSLTLELADRFCRLTLGHVTREYPYSPGHVWSGPDDGGTPRQLHPVFFGSFDWHSCVHGYWLLARLLREFPGLDAGPR IRALFDASLTAPKVAQECEYFGDPLRQNFERPYGWAWLLKLGAELGAHRDAGWAQALAPLARLIRERFEGFLAKATYPNR DGTHHNTAFAVRLALDYADAVGDAAFRAQLAAAAKRWYGDDADCPAWGEPSLDDFLSACLMEAECMRRALEADEFAAWFA RFLPRLTASQPSRLFTPALVSDHADGRITHLNGLNLSRAWCFRSLASSLPQDDARARLMREAAHRHGVAALPHIGGNYMA EHWLATYAVLMLTVDGAAGA
Sequences:
>Translated_340_residues MSSSLTLELADRFCRLTLGHVTREYPYSPGHVWSGPDDGGTPRQLHPVFFGSFDWHSCVHGYWLLARLLREFPGLDAGPR IRALFDASLTAPKVAQECEYFGDPLRQNFERPYGWAWLLKLGAELGAHRDAGWAQALAPLARLIRERFEGFLAKATYPNR DGTHHNTAFAVRLALDYADAVGDAAFRAQLAAAAKRWYGDDADCPAWGEPSLDDFLSACLMEAECMRRALEADEFAAWFA RFLPRLTASQPSRLFTPALVSDHADGRITHLNGLNLSRAWCFRSLASSLPQDDARARLMREAAHRHGVAALPHIGGNYMA EHWLATYAVLMLTVDGAAGA >Mature_339_residues SSSLTLELADRFCRLTLGHVTREYPYSPGHVWSGPDDGGTPRQLHPVFFGSFDWHSCVHGYWLLARLLREFPGLDAGPRI RALFDASLTAPKVAQECEYFGDPLRQNFERPYGWAWLLKLGAELGAHRDAGWAQALAPLARLIRERFEGFLAKATYPNRD GTHHNTAFAVRLALDYADAVGDAAFRAQLAAAAKRWYGDDADCPAWGEPSLDDFLSACLMEAECMRRALEADEFAAWFAR FLPRLTASQPSRLFTPALVSDHADGRITHLNGLNLSRAWCFRSLASSLPQDDARARLMREAAHRHGVAALPHIGGNYMAE HWLATYAVLMLTVDGAAGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37711; Mature: 37580
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSLTLELADRFCRLTLGHVTREYPYSPGHVWSGPDDGGTPRQLHPVFFGSFDWHSCVH CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECHHEECCCCHHHHHH GYWLLARLLREFPGLDAGPRIRALFDASLTAPKVAQECEYFGDPLRQNFERPYGWAWLLK HHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCHHHHHCCCCCHHHHHHH LGAELGAHRDAGWAQALAPLARLIRERFEGFLAKATYPNRDGTHHNTAFAVRLALDYADA HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHEEEHHHHHHHHH VGDAAFRAQLAAAAKRWYGDDADCPAWGEPSLDDFLSACLMEAECMRRALEADEFAAWFA HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RFLPRLTASQPSRLFTPALVSDHADGRITHLNGLNLSRAWCFRSLASSLPQDDARARLMR HHHHHHHCCCCCHHCCHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHH EAAHRHGVAALPHIGGNYMAEHWLATYAVLMLTVDGAAGA HHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHEECCCCCC >Mature Secondary Structure SSSLTLELADRFCRLTLGHVTREYPYSPGHVWSGPDDGGTPRQLHPVFFGSFDWHSCVH CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECHHEECCCCHHHHHH GYWLLARLLREFPGLDAGPRIRALFDASLTAPKVAQECEYFGDPLRQNFERPYGWAWLLK HHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCHHHHHCCCCCHHHHHHH LGAELGAHRDAGWAQALAPLARLIRERFEGFLAKATYPNRDGTHHNTAFAVRLALDYADA HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHEEEHHHHHHHHH VGDAAFRAQLAAAAKRWYGDDADCPAWGEPSLDDFLSACLMEAECMRRALEADEFAAWFA HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RFLPRLTASQPSRLFTPALVSDHADGRITHLNGLNLSRAWCFRSLASSLPQDDARARLMR HHHHHHHCCCCCHHCCHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHH EAAHRHGVAALPHIGGNYMAEHWLATYAVLMLTVDGAAGA HHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA