| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
Click here to switch to the map view.
The map label for this gene is gsiC [H]
Identifier: 238024441
GI number: 238024441
Start: 1324789
End: 1325742
Strand: Direct
Name: gsiC [H]
Synonym: bglu_2g10370
Alternate gene names: 238024441
Gene position: 1324789-1325742 (Clockwise)
Preceding gene: 238024440
Following gene: 238024442
Centisome position: 46.86
GC content: 68.55
Gene sequence:
>954_bases ATGAACCGGACCCTCATCGGCCTGATCGGCCGGCGCATCGCGGTGACCGCGCTGACCCTGCTGATCGTCTCCGTGATCAT CTTCACGATCACCAACCTGCTGCCGGGTGATGCCGCGCAGGCCGCGCTCGGCCAGTCGGCCACGCCGGAGACGGTCGCCG CGCTGCGCCTGCAGTTCGGCCTCGACCTGCCGGCGCACGTGCGTTACCTGCACTGGCTCGCGGGGCTGCTGCACGGCGAT TTCGGCCGTTCGCTGTCGGGCGACCTGCCGGTGTCGGAGATGATCGGCGGGCGGCTCTCGAAGTCGCTCACGCTCGCGGC GATCACCACCGCCGTGTCGGTGCCGGCCGCGCTGCTGCTCGGCATCGCCGCCGCGGTCAAGCGCGAGTCGCTGGTCGATC GCGTGATCAGCCTGGGCACGCTGTCGCTCGTCGCCACGCCGGAGTTCCTGATCGCGACGATCGCCGTGCTGCTGCTGGCG GTCAAGCTGCACTGGCTGTCCGCGCTGTCGTACAGCGGCCCGATCGACGGCCTGCACGACTTCCTGCGTGCCTATGCGAT GCCGGTCATGACGCTGTGCGCGGTGGTGATCGCGCAGATGGCGCGCATGACGCGGGCCGCGGTGATCGAGCAGTTGAGCG CGTCCTACGTCGAGATGGCCGTGCTCAAGGGAGCGAGCCCCAGCCGCGTGGTGCTGCGCCATGCGCTGCCGAACGCGATC GGGCCGATCGCCAACGCGATCGCGTTGAGCCTGTCGTACCTGCTCGGCGGCGTGGTCGTCGTGGAGACGATCTTCAACTA TCCGGGCCTCGCGAGCCTGATGGTCGATGCCGTCGGCAATCGCGACTTTCCGCTGATCCAGGCCTGCACGCTGATCTTCT GCGTGGCCTACCTGATGCTCGTGCTGTTCGCCGATCTCTGCTCGATCGTGTCGAACCCGCGACTGCGCACCTGA
Upstream 100 bases:
>100_bases GGCCCGATGATGGGCAGCATGTTCGCCGAATACGTCTGGTGGAATGCCTGAGGCCGTCGCCCGCCGCCGCCACGCTCGAC CTTCTCGGGAGTCTTGCTTC
Downstream 100 bases:
>100_bases GTGCTTCGTTTTTCCTCCGAGACGCCTCCTATGCAACCGTTCGAACCCACTCGACGCGACAAGGCGCTGCCGCCTTCCGG CGACCGGCGCCCGCCGTGGC
Product: Binding-protein-dependent transport systems inner membrane component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MNRTLIGLIGRRIAVTALTLLIVSVIIFTITNLLPGDAAQAALGQSATPETVAALRLQFGLDLPAHVRYLHWLAGLLHGD FGRSLSGDLPVSEMIGGRLSKSLTLAAITTAVSVPAALLLGIAAAVKRESLVDRVISLGTLSLVATPEFLIATIAVLLLA VKLHWLSALSYSGPIDGLHDFLRAYAMPVMTLCAVVIAQMARMTRAAVIEQLSASYVEMAVLKGASPSRVVLRHALPNAI GPIANAIALSLSYLLGGVVVVETIFNYPGLASLMVDAVGNRDFPLIQACTLIFCVAYLMLVLFADLCSIVSNPRLRT
Sequences:
>Translated_317_residues MNRTLIGLIGRRIAVTALTLLIVSVIIFTITNLLPGDAAQAALGQSATPETVAALRLQFGLDLPAHVRYLHWLAGLLHGD FGRSLSGDLPVSEMIGGRLSKSLTLAAITTAVSVPAALLLGIAAAVKRESLVDRVISLGTLSLVATPEFLIATIAVLLLA VKLHWLSALSYSGPIDGLHDFLRAYAMPVMTLCAVVIAQMARMTRAAVIEQLSASYVEMAVLKGASPSRVVLRHALPNAI GPIANAIALSLSYLLGGVVVVETIFNYPGLASLMVDAVGNRDFPLIQACTLIFCVAYLMLVLFADLCSIVSNPRLRT >Mature_317_residues MNRTLIGLIGRRIAVTALTLLIVSVIIFTITNLLPGDAAQAALGQSATPETVAALRLQFGLDLPAHVRYLHWLAGLLHGD FGRSLSGDLPVSEMIGGRLSKSLTLAAITTAVSVPAALLLGIAAAVKRESLVDRVISLGTLSLVATPEFLIATIAVLLLA VKLHWLSALSYSGPIDGLHDFLRAYAMPVMTLCAVVIAQMARMTRAAVIEQLSASYVEMAVLKGASPSRVVLRHALPNAI GPIANAIALSLSYLLGGVVVVETIFNYPGLASLMVDAVGNRDFPLIQACTLIFCVAYLMLVLFADLCSIVSNPRLRT
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787053, Length=298, Percent_Identity=35.9060402684564, Blast_Score=192, Evalue=2e-50, Organism=Escherichia coli, GI1789965, Length=336, Percent_Identity=31.25, Blast_Score=163, Evalue=1e-41, Organism=Escherichia coli, GI1789888, Length=309, Percent_Identity=32.6860841423948, Blast_Score=152, Evalue=3e-38, Organism=Escherichia coli, GI1787497, Length=313, Percent_Identity=28.1150159744409, Blast_Score=134, Evalue=1e-32, Organism=Escherichia coli, GI1787761, Length=314, Percent_Identity=29.6178343949045, Blast_Score=125, Evalue=5e-30, Organism=Escherichia coli, GI1787550, Length=271, Percent_Identity=23.2472324723247, Blast_Score=95, Evalue=7e-21, Organism=Escherichia coli, GI1788504, Length=282, Percent_Identity=27.3049645390071, Blast_Score=95, Evalue=7e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 33471; Mature: 33471
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRTLIGLIGRRIAVTALTLLIVSVIIFTITNLLPGDAAQAALGQSATPETVAALRLQFG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHC LDLPAHVRYLHWLAGLLHGDFGRSLSGDLPVSEMIGGRLSKSLTLAAITTAVSVPAALLL CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIAAAVKRESLVDRVISLGTLSLVATPEFLIATIAVLLLAVKLHWLSALSYSGPIDGLHD HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH FLRAYAMPVMTLCAVVIAQMARMTRAAVIEQLSASYVEMAVLKGASPSRVVLRHALPNAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHH GPIANAIALSLSYLLGGVVVVETIFNYPGLASLMVDAVGNRDFPLIQACTLIFCVAYLML HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH VLFADLCSIVSNPRLRT HHHHHHHHHHCCCCCCC >Mature Secondary Structure MNRTLIGLIGRRIAVTALTLLIVSVIIFTITNLLPGDAAQAALGQSATPETVAALRLQFG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHC LDLPAHVRYLHWLAGLLHGDFGRSLSGDLPVSEMIGGRLSKSLTLAAITTAVSVPAALLL CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIAAAVKRESLVDRVISLGTLSLVATPEFLIATIAVLLLAVKLHWLSALSYSGPIDGLHD HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH FLRAYAMPVMTLCAVVIAQMARMTRAAVIEQLSASYVEMAVLKGASPSRVVLRHALPNAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHH GPIANAIALSLSYLLGGVVVVETIFNYPGLASLMVDAVGNRDFPLIQACTLIFCVAYLML HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH VLFADLCSIVSNPRLRT HHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA