| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is gsiB [H]
Identifier: 238024440
GI number: 238024440
Start: 1323153
End: 1324739
Strand: Direct
Name: gsiB [H]
Synonym: bglu_2g10360
Alternate gene names: 238024440
Gene position: 1323153-1324739 (Clockwise)
Preceding gene: 238024439
Following gene: 238024441
Centisome position: 46.8
GC content: 66.04
Gene sequence:
>1587_bases ATGAGCGACGATATCGACAATGGCGGCGGCAAGGCCGGCTTCACGCGCCGCGACATGATGCGGATCATGGCGGCGGGCTG CGTGATGTCCGCCGGCGCCGGCGGACTGCTGGTGGCGCCCCGGGCGGCCCACGCCGCGAGCGCGCCGAAGCGCGGCGGGA AGATACGGGTTGCCAACGAATCCAGTTCGACGGCCGATACGCTGGACCCGGCCAAGGGGTCGAACAGCGCGGACTACATC CGCTTCTTCATGTTCTACAGCGGCCTCACGCAGCTCGATCAGAGCCTGACGCCGCAGATGAATCTCGCCGAGTCGCTGCA CACGACCGACGCGAAGACCTGGGTCATCAAGCTGCGCAAGGGCGTCACGTTCCACGACGGCAAGCCGGTCGGGCCGGCCG ACGTGCTGTATTCCCTGATGCGCCACAAGAACGCGGCCACCGCCTCGAAGGTCAAGACGCTCGCCGACCAGTTCGCCGAG GCGAAGGCGAGTGGCCCCGGCGAGGTCACGCTGACGCTCGCGAGCGCCAACGCCGACCTGCCGGTGATCCTCGCCACGCC GCAGCTGGTGATCGTCAAGGACGGCACGACGGATTTCAGCGCCGGCATCGGCTGCGGCCCGTACAAGCTGAAGTCGTTCC AGCCCGGCGTGTCGACCGTCGGGGTGCGCAACGACAGCTATTTCAAGGCGGGGATGCCCTACCTCGACGAGATCGAGCTG ATCGGCATCAGCGACAGCGCGGCGCGCCTGAACGCGCTGCTGTCGGGCGACGTGCATCTGATCAACGCGGTCGATCCGCG CTCGACCCAGCGGGTGGATGCCACGCCCGGCTATGCGCTGAAGGAAACCAAGTCGGGCCTCTACACCGACCTGATCATGC GCAGCGAAAACCCGATCACCGCGAAGCCCGAGTTCGTCGAAGGGATGAAGTACCTGTTCGATCGCAATCAGATCCGCTCG GCGGTGTTCCGCGGCTACGCGGTGGTCGGCAACGACCAGCCGATTCCGCCGGAGCACCGCTATTTCAACGCGTCGCTGCC GCAGCGCCCATACGACCCGGACAAGGCGAAGTTCCTGTTCCAGAAGGCCGGCGCGCTCGGCACCACGCTGCCGCCGATCT ATGCGACCTCGGATGCGAACGGGTCGATCGAGATGGCGGTGCTGCTGCAGCAGGCCGGGCAGAAGATCGGGCTGAACCTG CAGGTCAATCGCGTCTCGTCGGACGGCTACTGGTCGAACCACTGGATGAAGCATCCGCTCGGCTTCGGCAACGTCAACCC GCGCTCGAGCGCCGACGTGCTGTTTACGCAGTTCTTCAAGTCGGACGCGCCGTGGAACGAGTCGGGCTGGAAGAACGCGC GCTTCGACCAGTTGCTGCTGGCCGCCCGCTCCGAAACCGACGACGCCAAACGCAAGCAGATGTACGGCGAGATGCAGGTG ATCGTGTCGCAGCAGGGCCGGGTCGGGATTCCCGCCTTCATCAGCTTCCTCGACGGGTACGACAAGCGCATCGGCGGCCT GGGCTCGATCCCCACCGGCCCGATGATGGGCAGCATGTTCGCCGAATACGTCTGGTGGAATGCCTGA
Upstream 100 bases:
>100_bases TCGGCATGACGTTGCGCCCGCCACCAGCAGCCGGGCGCGCCGGCAGCGAAGCGCCACGCTGGACCCCAGGACCCACTTAC CACAGTCAGGAGCAGTACGG
Downstream 100 bases:
>100_bases GGCCGTCGCCCGCCGCCGCCACGCTCGACCTTCTCGGGAGTCTTGCTTCATGAACCGGACCCTCATCGGCCTGATCGGCC GGCGCATCGCGGTGACCGCG
Product: family 5 extracellular solute-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 528; Mature: 527
Protein sequence:
>528_residues MSDDIDNGGGKAGFTRRDMMRIMAAGCVMSAGAGGLLVAPRAAHAASAPKRGGKIRVANESSSTADTLDPAKGSNSADYI RFFMFYSGLTQLDQSLTPQMNLAESLHTTDAKTWVIKLRKGVTFHDGKPVGPADVLYSLMRHKNAATASKVKTLADQFAE AKASGPGEVTLTLASANADLPVILATPQLVIVKDGTTDFSAGIGCGPYKLKSFQPGVSTVGVRNDSYFKAGMPYLDEIEL IGISDSAARLNALLSGDVHLINAVDPRSTQRVDATPGYALKETKSGLYTDLIMRSENPITAKPEFVEGMKYLFDRNQIRS AVFRGYAVVGNDQPIPPEHRYFNASLPQRPYDPDKAKFLFQKAGALGTTLPPIYATSDANGSIEMAVLLQQAGQKIGLNL QVNRVSSDGYWSNHWMKHPLGFGNVNPRSSADVLFTQFFKSDAPWNESGWKNARFDQLLLAARSETDDAKRKQMYGEMQV IVSQQGRVGIPAFISFLDGYDKRIGGLGSIPTGPMMGSMFAEYVWWNA
Sequences:
>Translated_528_residues MSDDIDNGGGKAGFTRRDMMRIMAAGCVMSAGAGGLLVAPRAAHAASAPKRGGKIRVANESSSTADTLDPAKGSNSADYI RFFMFYSGLTQLDQSLTPQMNLAESLHTTDAKTWVIKLRKGVTFHDGKPVGPADVLYSLMRHKNAATASKVKTLADQFAE AKASGPGEVTLTLASANADLPVILATPQLVIVKDGTTDFSAGIGCGPYKLKSFQPGVSTVGVRNDSYFKAGMPYLDEIEL IGISDSAARLNALLSGDVHLINAVDPRSTQRVDATPGYALKETKSGLYTDLIMRSENPITAKPEFVEGMKYLFDRNQIRS AVFRGYAVVGNDQPIPPEHRYFNASLPQRPYDPDKAKFLFQKAGALGTTLPPIYATSDANGSIEMAVLLQQAGQKIGLNL QVNRVSSDGYWSNHWMKHPLGFGNVNPRSSADVLFTQFFKSDAPWNESGWKNARFDQLLLAARSETDDAKRKQMYGEMQV IVSQQGRVGIPAFISFLDGYDKRIGGLGSIPTGPMMGSMFAEYVWWNA >Mature_527_residues SDDIDNGGGKAGFTRRDMMRIMAAGCVMSAGAGGLLVAPRAAHAASAPKRGGKIRVANESSSTADTLDPAKGSNSADYIR FFMFYSGLTQLDQSLTPQMNLAESLHTTDAKTWVIKLRKGVTFHDGKPVGPADVLYSLMRHKNAATASKVKTLADQFAEA KASGPGEVTLTLASANADLPVILATPQLVIVKDGTTDFSAGIGCGPYKLKSFQPGVSTVGVRNDSYFKAGMPYLDEIELI GISDSAARLNALLSGDVHLINAVDPRSTQRVDATPGYALKETKSGLYTDLIMRSENPITAKPEFVEGMKYLFDRNQIRSA VFRGYAVVGNDQPIPPEHRYFNASLPQRPYDPDKAKFLFQKAGALGTTLPPIYATSDANGSIEMAVLLQQAGQKIGLNLQ VNRVSSDGYWSNHWMKHPLGFGNVNPRSSADVLFTQFFKSDAPWNESGWKNARFDQLLLAARSETDDAKRKQMYGEMQVI VSQQGRVGIPAFISFLDGYDKRIGGLGSIPTGPMMGSMFAEYVWWNA
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 5 family [H]
Homologues:
Organism=Escherichia coli, GI1787052, Length=464, Percent_Identity=23.2758620689655, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1789966, Length=482, Percent_Identity=22.6141078838174, Blast_Score=86, Evalue=4e-18, Organism=Escherichia coli, GI1787762, Length=449, Percent_Identity=24.7216035634744, Blast_Score=79, Evalue=1e-15, Organism=Escherichia coli, GI1789887, Length=328, Percent_Identity=27.1341463414634, Blast_Score=71, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000914 [H]
Pfam domain/function: PF00496 SBP_bac_5 [H]
EC number: NA
Molecular weight: Translated: 57164; Mature: 57032
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDDIDNGGGKAGFTRRDMMRIMAAGCVMSAGAGGLLVAPRAAHAASAPKRGGKIRVANE CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCHHHHCCCCCCCCEEEEECC SSSTADTLDPAKGSNSADYIRFFMFYSGLTQLDQSLTPQMNLAESLHTTDAKTWVIKLRK CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEEEC GVTFHDGKPVGPADVLYSLMRHKNAATASKVKTLADQFAEAKASGPGEVTLTLASANADL CCEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCC PVILATPQLVIVKDGTTDFSAGIGCGPYKLKSFQPGVSTVGVRNDSYFKAGMPYLDEIEL EEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEE IGISDSAARLNALLSGDVHLINAVDPRSTQRVDATPGYALKETKSGLYTDLIMRSENPIT EECCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHHHCCCCEEEHEEECCCCCC AKPEFVEGMKYLFDRNQIRSAVFRGYAVVGNDQPIPPEHRYFNASLPQRPYDPDKAKFLF CCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCEECCCCCCCCCCCHHHHHHH QKAGALGTTLPPIYATSDANGSIEMAVLLQQAGQKIGLNLQVNRVSSDGYWSNHWMKHPL HHHCCCCCCCCCEEEECCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCC GFGNVNPRSSADVLFTQFFKSDAPWNESGWKNARFDQLLLAARSETDDAKRKQMYGEMQV CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHEE IVSQQGRVGIPAFISFLDGYDKRIGGLGSIPTGPMMGSMFAEYVWWNA EEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure SDDIDNGGGKAGFTRRDMMRIMAAGCVMSAGAGGLLVAPRAAHAASAPKRGGKIRVANE CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCHHHHCCCCCCCCEEEEECC SSSTADTLDPAKGSNSADYIRFFMFYSGLTQLDQSLTPQMNLAESLHTTDAKTWVIKLRK CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEEEC GVTFHDGKPVGPADVLYSLMRHKNAATASKVKTLADQFAEAKASGPGEVTLTLASANADL CCEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCC PVILATPQLVIVKDGTTDFSAGIGCGPYKLKSFQPGVSTVGVRNDSYFKAGMPYLDEIEL EEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEE IGISDSAARLNALLSGDVHLINAVDPRSTQRVDATPGYALKETKSGLYTDLIMRSENPIT EECCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHHHCCCCEEEHEEECCCCCC AKPEFVEGMKYLFDRNQIRSAVFRGYAVVGNDQPIPPEHRYFNASLPQRPYDPDKAKFLF CCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCEECCCCCCCCCCCHHHHHHH QKAGALGTTLPPIYATSDANGSIEMAVLLQQAGQKIGLNLQVNRVSSDGYWSNHWMKHPL HHHCCCCCCCCCEEEECCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCC GFGNVNPRSSADVLFTQFFKSDAPWNESGWKNARFDQLLLAARSETDDAKRKQMYGEMQV CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHEE IVSQQGRVGIPAFISFLDGYDKRIGGLGSIPTGPMMGSMFAEYVWWNA EEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA