Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is 238024401

Identifier: 238024401

GI number: 238024401

Start: 1264878

End: 1265768

Strand: Reverse

Name: 238024401

Synonym: bglu_2g09940

Alternate gene names: NA

Gene position: 1265768-1264878 (Counterclockwise)

Preceding gene: 238024402

Following gene: 339717970

Centisome position: 44.77

GC content: 67.12

Gene sequence:

>891_bases
ATGAGCGACCGCACCATTGTTCCGATCGCGCGCATCCGCCATGACGGCAAGCGATCGCTGCGTGAAGTGATGAAGGGCCT
CGACCGGCCCGCGGTACTGCAAGGCTTCATCGACGACTGGCCGGCACTGGCGCGCTGGACGCCGGAATTCTTCGTCGCGC
AGCACGGCGGCCACGACATCACGGTCGAGACCTCGAGCCTCTGCCCGACGCCGACCCGTCCTGACCTTTACCTGGCCTCG
CGACGCTACGAGAAAGCGCCGCTAGGCAAGACCATCCGCGAGATGCAGAGCCAGGGGGCAGCACGCACGGCCTACATCAC
CTACGCCGAGATCTACGAGGCGATTCCGTCGCTGCGCGAAGACATCACGTTGCTGCACGAGCGATACGGCTTCCCGCGCT
GGCTGCCGGACGGCCTGCGGCGCAGACTGATACTGCGGCCCGGTTTCTGGCTCGGCCCCGAGGGCATTTCCTCGCCGCTG
CATTTCGACCGTCACGAGAACCTCAACGTGCAGGTATACGGCCGCAAGCGCTGGGTGCTGTTCGGGCCGGGGCAATCGCA
CCAGGTCTATTACCGCCAGCGCCGTGACCTACCGGTGATTTTCAGCCCGGTCGACATGACGCGGCCCGACCTCGACGCCT
TCCCCAGGCTAGGCGACGCGCAGCGTCACGACTTCGTGCTCGAGGCCGGCGAGGTGCTCTACCTGCCGCCCGGCTGGTGG
CACTTCGTGACCTCGCTGAGCGACTCGATCAACGTCAACTACTGGTGGTGGTCGCCGCGCGCCCTGCGAACCTGGGCGCG
CGTCGAACTGGCGAGCCTCGCCCAAGCGCTGGCGCGCCGCTTCGACCGCGGCACCGACGCAACGGGCAAACCCACTTCGA
TGCCGCGCTGA

Upstream 100 bases:

>100_bases
GCTGGCTGCCCGGCGACGTCTTGCGGCCGGGGCGGTGTGCGGCGCTCGCGATGCCGGCCGATGCCGGCCATGCCACCCAC
GCCGTCCCGGAGAACGCATC

Downstream 100 bases:

>100_bases
GGCGCCGCCCCCCCACATTCGAGCCCCCCATGCAAAACGAATTCGATTTCACCGTCATCGATGCGCTCTACGCATCCGGC
TATCACGGGCCGCGCGCGCT

Product: transcription factor jumonji

Products: NA

Alternate protein names: Transcription Factor Jumonji Domain-Containing Protein; JmjC Domain-Containing Protein; Transcription Factor Jumonji JmjC Domain Protein; Pass1-Related Protein; Transcription Factor Jumonji/Aspartyl Beta-Hydroxylase; Transcription Factor Jumonji Jmjc DomaiN-Containing Protein; PASs1-Like Protein; JmjC Domain Protein; Transcription Factor Jumonji JmjC; Acetyltransferase; JmjC-Domain Protein; Transcription Factor Jumonji Jmjc Domain-Containing Protein; Transcription Factor Jumonji JmjC Protein; PASS1 Domain-Containing Protein; Peptide-Aspartate Beta-Dioxygenase; N-Acetyltransferase And Transcription Factor-Like Protein

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MSDRTIVPIARIRHDGKRSLREVMKGLDRPAVLQGFIDDWPALARWTPEFFVAQHGGHDITVETSSLCPTPTRPDLYLAS
RRYEKAPLGKTIREMQSQGAARTAYITYAEIYEAIPSLREDITLLHERYGFPRWLPDGLRRRLILRPGFWLGPEGISSPL
HFDRHENLNVQVYGRKRWVLFGPGQSHQVYYRQRRDLPVIFSPVDMTRPDLDAFPRLGDAQRHDFVLEAGEVLYLPPGWW
HFVTSLSDSINVNYWWWSPRALRTWARVELASLAQALARRFDRGTDATGKPTSMPR

Sequences:

>Translated_296_residues
MSDRTIVPIARIRHDGKRSLREVMKGLDRPAVLQGFIDDWPALARWTPEFFVAQHGGHDITVETSSLCPTPTRPDLYLAS
RRYEKAPLGKTIREMQSQGAARTAYITYAEIYEAIPSLREDITLLHERYGFPRWLPDGLRRRLILRPGFWLGPEGISSPL
HFDRHENLNVQVYGRKRWVLFGPGQSHQVYYRQRRDLPVIFSPVDMTRPDLDAFPRLGDAQRHDFVLEAGEVLYLPPGWW
HFVTSLSDSINVNYWWWSPRALRTWARVELASLAQALARRFDRGTDATGKPTSMPR
>Mature_295_residues
SDRTIVPIARIRHDGKRSLREVMKGLDRPAVLQGFIDDWPALARWTPEFFVAQHGGHDITVETSSLCPTPTRPDLYLASR
RYEKAPLGKTIREMQSQGAARTAYITYAEIYEAIPSLREDITLLHERYGFPRWLPDGLRRRLILRPGFWLGPEGISSPLH
FDRHENLNVQVYGRKRWVLFGPGQSHQVYYRQRRDLPVIFSPVDMTRPDLDAFPRLGDAQRHDFVLEAGEVLYLPPGWWH
FVTSLSDSINVNYWWWSPRALRTWARVELASLAQALARRFDRGTDATGKPTSMPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI223942014, Length=257, Percent_Identity=29.1828793774319, Blast_Score=111, Evalue=7e-25,
Organism=Homo sapiens, GI223942018, Length=250, Percent_Identity=28, Blast_Score=111, Evalue=8e-25,
Organism=Homo sapiens, GI21314714, Length=263, Percent_Identity=29.6577946768061, Blast_Score=95, Evalue=8e-20,
Organism=Homo sapiens, GI89242134, Length=260, Percent_Identity=22.3076923076923, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI167860114, Length=265, Percent_Identity=24.9056603773585, Blast_Score=75, Evalue=9e-14,
Organism=Homo sapiens, GI148596936, Length=151, Percent_Identity=31.1258278145695, Blast_Score=72, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI17557716, Length=250, Percent_Identity=23.2, Blast_Score=88, Evalue=5e-18,
Organism=Drosophila melanogaster, GI281365404, Length=234, Percent_Identity=28.2051282051282, Blast_Score=105, Evalue=4e-23,
Organism=Drosophila melanogaster, GI24650697, Length=114, Percent_Identity=35.9649122807018, Blast_Score=69, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34288; Mature: 34156

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDRTIVPIARIRHDGKRSLREVMKGLDRPAVLQGFIDDWPALARWTPEFFVAQHGGHDI
CCCCEEEHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHCCCHHEEEECCCCEE
TVETSSLCPTPTRPDLYLASRRYEKAPLGKTIREMQSQGAARTAYITYAEIYEAIPSLRE
EEECCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHH
DITLLHERYGFPRWLPDGLRRRLILRPGFWLGPEGISSPLHFDRHENLNVQVYGRKRWVL
HHHHHHHHCCCCCCCCHHHHHEEEECCCCEECCCCCCCCCCCCCCCCCCEEEEECEEEEE
FGPGQSHQVYYRQRRDLPVIFSPVDMTRPDLDAFPRLGDAQRHDFVLEAGEVLYLPPGWW
ECCCCCCHHHHHHCCCCCEEECCCCCCCCCHHHCCCCCCCCCCCEEEECCCEEEECCCHH
HFVTSLSDSINVNYWWWSPRALRTWARVELASLAQALARRFDRGTDATGKPTSMPR
HHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SDRTIVPIARIRHDGKRSLREVMKGLDRPAVLQGFIDDWPALARWTPEFFVAQHGGHDI
CCCEEEHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHCCCHHEEEECCCCEE
TVETSSLCPTPTRPDLYLASRRYEKAPLGKTIREMQSQGAARTAYITYAEIYEAIPSLRE
EEECCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHH
DITLLHERYGFPRWLPDGLRRRLILRPGFWLGPEGISSPLHFDRHENLNVQVYGRKRWVL
HHHHHHHHCCCCCCCCHHHHHEEEECCCCEECCCCCCCCCCCCCCCCCCEEEEECEEEEE
FGPGQSHQVYYRQRRDLPVIFSPVDMTRPDLDAFPRLGDAQRHDFVLEAGEVLYLPPGWW
ECCCCCCHHHHHHCCCCCEEECCCCCCCCCHHHCCCCCCCCCCCEEEECCCEEEECCCHH
HFVTSLSDSINVNYWWWSPRALRTWARVELASLAQALARRFDRGTDATGKPTSMPR
HHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA