| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024402
Identifier: 238024402
GI number: 238024402
Start: 1265765
End: 1267246
Strand: Reverse
Name: 238024402
Synonym: bglu_2g09950
Alternate gene names: NA
Gene position: 1267246-1265765 (Counterclockwise)
Preceding gene: 238024403
Following gene: 238024401
Centisome position: 44.82
GC content: 68.62
Gene sequence:
>1482_bases ATGACAGTCGACGATCGCCTGGGGGTATTCCTCAATACGGGCATTCTGGCTTCGCACGCGCAGGACCTGGGTGCGATGGT CGCCCTGCAGGACGGCATCCTGCAGGATTTCATCGCGGCGGGCTTCGATCCCACCGCCTGCGCCGCGGTATTGCGCCAAG CCATTGCGCGCCATCCATTCATCGCTGAGCTGTTCGATCCCGAATCGGTCGCCGCAGGCGGCTGTATAGCGAGCGACGCA CTGCTCTACCAACTCCATCGCCAGCGCGATCGCTGGCGCTTCGAGATCACGCCGCCGCGTGGCGAACCGATCGTACTGCA AACCAGTGCGGATCGCCTGCCGGCCCTGGGCAACGCGCTGCGCGACGCGCTGCAGCGCCAGCACTGGGAGCCGCTGGCCG CGCTGTTCGACGAACCGCGCCTGCTGGCGTCGCACGCCCCGGCGGCTGCCGCGCCACCGCTCGCGTGGCCGGGATTCCAC GGGCCGGGCATCCAGCGCCTAGAACACGCCTCGCTGCTGATCGCCTCTGAAACGACGCGCCTGCTGACCGACCCGATCAG CCTGGCGGTCGGCGGCAACGTCGGCCTGCCCGACCTGGAGCGGGCGCCGTCGAACCTTGCCGGCTCGATCGACGGCATGC TGGTGACTCACGGCCACCTCGATCACTGGCACCTGCCCACCCTGTTGCGTCATGGCGGCGACGGCTCGGTGCCGGTGATA GTGCCTGATATTCCGGTGCCCTCGCTGCTGTCCCAGGACGACATGCGTCGCTCGCTGCAGGAGCTCGGCCAGAACGCGAT CGCGCCGAAATGGGGCGACACGGTGCAAATCGGCGACATCGAGATCGACATCCTGCCGTTCTACGGCGAACAGCCGACCA TCGGAGCAGCCACGCCGCCCGAGCACGTGCGCAACTGGGGCAACTGCTACAGGGTCACGACGCCGCAATTCTCGGTGATC CTGCTGGTCGACAGCGGCGAGGACGCGATGGGGTCGGTGATGCAAGTGATCGAGAGCTCGGTGGCGCGGCGCGGGCCGCC GGACCTGATCCTGAGCTGTTGCCGCGAGATGCGCAAGGCGCCGTTCTGGCAGGGATTGTTCACGTTCTGGATGGTGCTGC CGATGCACGAGCTCAAGCGCCTGACGCGCGCTGAGCAGGCCGGCGAGGGACCGTCGATCACGCTCGGCCCGGAGCGCCTG GCCGAGGCCTGCGTGCGGGCCGGCGTCGATGCCTTTGCCCCCTATGCGAACGGCTTTGGCGGCATCGGCGAGCCGATCCG CGATATCGGCTGGATCAACGACGAACCCAGCGAGGCCGACATGCTCGAGCGCATCGAGGCGCGTCTCGCCACACTCGACG GCACCACCCGCGTGATCCGCTGGCTGCCCGGCGACGTCTTGCGGCCGGGGCGGTGTGCGGCGCTCGCGATGCCGGCCGAT GCCGGCCATGCCACCCACGCCGTCCCGGAGAACGCATCATGA
Upstream 100 bases:
>100_bases GACGACGCGACTACACGGTAGTCGCGTCGACGGATCGCAGGCGAGGCAGCGATGCCCGGCCTGCGCGCGCCGTTGCGCGA ATTTCATCCGAGGGCAAAAC
Downstream 100 bases:
>100_bases GCGACCGCACCATTGTTCCGATCGCGCGCATCCGCCATGACGGCAAGCGATCGCTGCGTGAAGTGATGAAGGGCCTCGAC CGGCCCGCGGTACTGCAAGG
Product: metallo-beta-lactamase superfamily protein
Products: NA
Alternate protein names: Metallo-Beta-Lactamase Family Protein
Number of amino acids: Translated: 493; Mature: 492
Protein sequence:
>493_residues MTVDDRLGVFLNTGILASHAQDLGAMVALQDGILQDFIAAGFDPTACAAVLRQAIARHPFIAELFDPESVAAGGCIASDA LLYQLHRQRDRWRFEITPPRGEPIVLQTSADRLPALGNALRDALQRQHWEPLAALFDEPRLLASHAPAAAAPPLAWPGFH GPGIQRLEHASLLIASETTRLLTDPISLAVGGNVGLPDLERAPSNLAGSIDGMLVTHGHLDHWHLPTLLRHGGDGSVPVI VPDIPVPSLLSQDDMRRSLQELGQNAIAPKWGDTVQIGDIEIDILPFYGEQPTIGAATPPEHVRNWGNCYRVTTPQFSVI LLVDSGEDAMGSVMQVIESSVARRGPPDLILSCCREMRKAPFWQGLFTFWMVLPMHELKRLTRAEQAGEGPSITLGPERL AEACVRAGVDAFAPYANGFGGIGEPIRDIGWINDEPSEADMLERIEARLATLDGTTRVIRWLPGDVLRPGRCAALAMPAD AGHATHAVPENAS
Sequences:
>Translated_493_residues MTVDDRLGVFLNTGILASHAQDLGAMVALQDGILQDFIAAGFDPTACAAVLRQAIARHPFIAELFDPESVAAGGCIASDA LLYQLHRQRDRWRFEITPPRGEPIVLQTSADRLPALGNALRDALQRQHWEPLAALFDEPRLLASHAPAAAAPPLAWPGFH GPGIQRLEHASLLIASETTRLLTDPISLAVGGNVGLPDLERAPSNLAGSIDGMLVTHGHLDHWHLPTLLRHGGDGSVPVI VPDIPVPSLLSQDDMRRSLQELGQNAIAPKWGDTVQIGDIEIDILPFYGEQPTIGAATPPEHVRNWGNCYRVTTPQFSVI LLVDSGEDAMGSVMQVIESSVARRGPPDLILSCCREMRKAPFWQGLFTFWMVLPMHELKRLTRAEQAGEGPSITLGPERL AEACVRAGVDAFAPYANGFGGIGEPIRDIGWINDEPSEADMLERIEARLATLDGTTRVIRWLPGDVLRPGRCAALAMPAD AGHATHAVPENAS >Mature_492_residues TVDDRLGVFLNTGILASHAQDLGAMVALQDGILQDFIAAGFDPTACAAVLRQAIARHPFIAELFDPESVAAGGCIASDAL LYQLHRQRDRWRFEITPPRGEPIVLQTSADRLPALGNALRDALQRQHWEPLAALFDEPRLLASHAPAAAAPPLAWPGFHG PGIQRLEHASLLIASETTRLLTDPISLAVGGNVGLPDLERAPSNLAGSIDGMLVTHGHLDHWHLPTLLRHGGDGSVPVIV PDIPVPSLLSQDDMRRSLQELGQNAIAPKWGDTVQIGDIEIDILPFYGEQPTIGAATPPEHVRNWGNCYRVTTPQFSVIL LVDSGEDAMGSVMQVIESSVARRGPPDLILSCCREMRKAPFWQGLFTFWMVLPMHELKRLTRAEQAGEGPSITLGPERLA EACVRAGVDAFAPYANGFGGIGEPIRDIGWINDEPSEADMLERIEARLATLDGTTRVIRWLPGDVLRPGRCAALAMPADA GHATHAVPENAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53203; Mature: 53072
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVDDRLGVFLNTGILASHAQDLGAMVALQDGILQDFIAAGFDPTACAAVLRQAIARHPF CCCCCCCCHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC IAELFDPESVAAGGCIASDALLYQLHRQRDRWRFEITPPRGEPIVLQTSADRLPALGNAL HHHHCCCHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCCCCCHHHHHHH RDALQRQHWEPLAALFDEPRLLASHAPAAAAPPLAWPGFHGPGIQRLEHASLLIASETTR HHHHHHHCCCHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHEEEECCHHH LLTDPISLAVGGNVGLPDLERAPSNLAGSIDGMLVTHGHLDHWHLPTLLRHGGDGSVPVI HHHCCHHEEECCCCCCCCHHHCCCHHCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCEE VPDIPVPSLLSQDDMRRSLQELGQNAIAPKWGDTVQIGDIEIDILPFYGEQPTIGAATPP ECCCCCCHHCCHHHHHHHHHHHCCCCCCCCCCCEEEECCEEEEEEECCCCCCCCCCCCCH EHVRNWGNCYRVTTPQFSVILLVDSGEDAMGSVMQVIESSVARRGPPDLILSCCREMRKA HHHHCCCCEEEEECCCEEEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC PFWQGLFTFWMVLPMHELKRLTRAEQAGEGPSITLGPERLAEACVRAGVDAFAPYANGFG CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHCCHHHHCCHHCCCC GIGEPIRDIGWINDEPSEADMLERIEARLATLDGTTRVIRWLPGDVLRPGRCAALAMPAD CCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCEEEECCCC AGHATHAVPENAS CCCCCCCCCCCCC >Mature Secondary Structure TVDDRLGVFLNTGILASHAQDLGAMVALQDGILQDFIAAGFDPTACAAVLRQAIARHPF CCCCCCCHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC IAELFDPESVAAGGCIASDALLYQLHRQRDRWRFEITPPRGEPIVLQTSADRLPALGNAL HHHHCCCHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCCCCCHHHHHHH RDALQRQHWEPLAALFDEPRLLASHAPAAAAPPLAWPGFHGPGIQRLEHASLLIASETTR HHHHHHHCCCHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHEEEECCHHH LLTDPISLAVGGNVGLPDLERAPSNLAGSIDGMLVTHGHLDHWHLPTLLRHGGDGSVPVI HHHCCHHEEECCCCCCCCHHHCCCHHCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCEE VPDIPVPSLLSQDDMRRSLQELGQNAIAPKWGDTVQIGDIEIDILPFYGEQPTIGAATPP ECCCCCCHHCCHHHHHHHHHHHCCCCCCCCCCCEEEECCEEEEEEECCCCCCCCCCCCCH EHVRNWGNCYRVTTPQFSVILLVDSGEDAMGSVMQVIESSVARRGPPDLILSCCREMRKA HHHHCCCCEEEEECCCEEEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC PFWQGLFTFWMVLPMHELKRLTRAEQAGEGPSITLGPERLAEACVRAGVDAFAPYANGFG CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHCCHHHHCCHHCCCC GIGEPIRDIGWINDEPSEADMLERIEARLATLDGTTRVIRWLPGDVLRPGRCAALAMPAD CCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCEEEECCCC AGHATHAVPENAS CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA