| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024388
Identifier: 238024388
GI number: 238024388
Start: 1219744
End: 1221180
Strand: Direct
Name: 238024388
Synonym: bglu_2g09810
Alternate gene names: NA
Gene position: 1219744-1221180 (Clockwise)
Preceding gene: 238024387
Following gene: 238024389
Centisome position: 43.14
GC content: 70.01
Gene sequence:
>1437_bases ATGACGCAAGCCATGCCTTTGCTATTTGACTTCTCGCCGTTCGTCGGACAAAGCGAACGCCATGTCGAGCTGATCAAGCA GTTTTCCGCCGCGCACGCGTTTCGCAGCGCCCAGGTCAGCGAACTGCTGCTCGACGACGATTTCCACCGCCGGCCGCTGC GCCCCGAGGATTTCGAGTTCCTGAAGTTCCGGAAGCCGGTGCGCATGCACAACGTGAGCCGCCTGCCGGCGCTGGCCTCG GGCCGCACGCTGCTGTCGATCTACGAGCTGGCCATCGCGCGCCTGCCGCGCAGCGCGAGCGCCGACGAATGGCAGCACTT CAGCGGCTTCTACGGCGACGACGTGCAGGTGTTGGGCGCGCAGATCGTGCCGTTCCTCGAAGCCTATGCGTTCGAGTACC TGGCGCGCGAGCAGACCCTCGAGGCCGAGCCGCGCGCCGCGGCGGCGCGCCTGAGGCGCATCGTCGACGACGAGACGGCG TTCTGGAGCGAGACCTTCGCGCGCCTGATGCGCAACGACTACCTGCAGGAAGGGCTGCGTTTCATCATGGTGCAGCGCTG GGCGCAGGCACCCTCCAAGCGCCGCGCGCTCGCGCGCGCCACGGCCAGCGGCTTGCTCGACATGCTGCCCGAGGCGCTGC GTCCGGCGCTGCACGGCGACCTGCCCGACGACGCGCTGCTCGAGAAGGTCGCCGCCTCGGTCGGCGTGACGGGCCGGCAG CACGCCTACTGGCAGTTCTATCTGCCCACCAGCACCGCGAAGTGCAACCTGCTCTACGCGCTCGGCCGCCGTCCCGATCG CGCCTTCGCGTTCGCCGGCGCCGCGTTCGCGGCCGAAGCCGAATGGCTCGCGTTCGGCGCCGCGCTCGAGCGTGCCTGCG CCCATCTCGCGCCGGCCGGCCGCCGGCCCGGCGAGGTTGAGCGCCGCGTCGCCGCGCTGGCCGAGCGCTTCGAGCAGGCC CTGCGGACGATCGCCGAGCGCTTCGGCCAGCCCGCCTACGCGCAGGCCGTGCAGGGCGCGGCCGCGCACGAGCGCCTCTG CGAGCGCGGCCGCTGGGATCTGGGCGAGCAGCTGCTGTGGCTGTCGTCGATCCGCCATTACGTGCGCTTCGCGCATCGCA TCAGCGACCGCATCGAGGCCGAGTGTCCCGGCATCGACCGCGAGACCTTCGTCGAGCCCTTCGAGATGTGCTCGACCACC CACGTCCACAACGATCACCGCCTCGTGACGATCGAGCAAGGCCAGATGCTGTTCTGGGGCAACGTCGGCATGCAGCTGAA GATGGACGTCGGCGACAAGGTGCTGATCCCCGACGGCCGCCTGCACGGCTCCACGGTGCTCTCCGGCGAATGCACCTACC ACCAGCCGATCATCCCGGACGACTGGGTCAAGGCGCTCGTCGCCGAACTCGAGGCCGGCTCGAACGCGCCCGCCTGA
Upstream 100 bases:
>100_bases GCGTCCGGCCGCCGGGGCCGCTGCGGCCGCCTTTTCCCGCGCTCGCCGGCTCCGCGGCCGCTGCGCGCGCTCTCCTGATT TCTCCCGAGGAACCTTCGCC
Downstream 100 bases:
>100_bases GCCGCCTCCGGCAAGCATCCGCTTTGAATGGTGGGCCGTGCATTCCGCGCGGCCCGGCACGCTCGCCCGCGCAGGCGACG AACGAGGATATGAAATGCGA
Product: Cupin 2 protein
Products: NA
Alternate protein names: Non-Ribosomal Peptide Synthetase
Number of amino acids: Translated: 478; Mature: 477
Protein sequence:
>478_residues MTQAMPLLFDFSPFVGQSERHVELIKQFSAAHAFRSAQVSELLLDDDFHRRPLRPEDFEFLKFRKPVRMHNVSRLPALAS GRTLLSIYELAIARLPRSASADEWQHFSGFYGDDVQVLGAQIVPFLEAYAFEYLAREQTLEAEPRAAAARLRRIVDDETA FWSETFARLMRNDYLQEGLRFIMVQRWAQAPSKRRALARATASGLLDMLPEALRPALHGDLPDDALLEKVAASVGVTGRQ HAYWQFYLPTSTAKCNLLYALGRRPDRAFAFAGAAFAAEAEWLAFGAALERACAHLAPAGRRPGEVERRVAALAERFEQA LRTIAERFGQPAYAQAVQGAAAHERLCERGRWDLGEQLLWLSSIRHYVRFAHRISDRIEAECPGIDRETFVEPFEMCSTT HVHNDHRLVTIEQGQMLFWGNVGMQLKMDVGDKVLIPDGRLHGSTVLSGECTYHQPIIPDDWVKALVAELEAGSNAPA
Sequences:
>Translated_478_residues MTQAMPLLFDFSPFVGQSERHVELIKQFSAAHAFRSAQVSELLLDDDFHRRPLRPEDFEFLKFRKPVRMHNVSRLPALAS GRTLLSIYELAIARLPRSASADEWQHFSGFYGDDVQVLGAQIVPFLEAYAFEYLAREQTLEAEPRAAAARLRRIVDDETA FWSETFARLMRNDYLQEGLRFIMVQRWAQAPSKRRALARATASGLLDMLPEALRPALHGDLPDDALLEKVAASVGVTGRQ HAYWQFYLPTSTAKCNLLYALGRRPDRAFAFAGAAFAAEAEWLAFGAALERACAHLAPAGRRPGEVERRVAALAERFEQA LRTIAERFGQPAYAQAVQGAAAHERLCERGRWDLGEQLLWLSSIRHYVRFAHRISDRIEAECPGIDRETFVEPFEMCSTT HVHNDHRLVTIEQGQMLFWGNVGMQLKMDVGDKVLIPDGRLHGSTVLSGECTYHQPIIPDDWVKALVAELEAGSNAPA >Mature_477_residues TQAMPLLFDFSPFVGQSERHVELIKQFSAAHAFRSAQVSELLLDDDFHRRPLRPEDFEFLKFRKPVRMHNVSRLPALASG RTLLSIYELAIARLPRSASADEWQHFSGFYGDDVQVLGAQIVPFLEAYAFEYLAREQTLEAEPRAAAARLRRIVDDETAF WSETFARLMRNDYLQEGLRFIMVQRWAQAPSKRRALARATASGLLDMLPEALRPALHGDLPDDALLEKVAASVGVTGRQH AYWQFYLPTSTAKCNLLYALGRRPDRAFAFAGAAFAAEAEWLAFGAALERACAHLAPAGRRPGEVERRVAALAERFEQAL RTIAERFGQPAYAQAVQGAAAHERLCERGRWDLGEQLLWLSSIRHYVRFAHRISDRIEAECPGIDRETFVEPFEMCSTTH VHNDHRLVTIEQGQMLFWGNVGMQLKMDVGDKVLIPDGRLHGSTVLSGECTYHQPIIPDDWVKALVAELEAGSNAPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53810; Mature: 53679
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQAMPLLFDFSPFVGQSERHVELIKQFSAAHAFRSAQVSELLLDDDFHRRPLRPEDFEF CCCCCCHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH LKFRKPVRMHNVSRLPALASGRTLLSIYELAIARLPRSASADEWQHFSGFYGDDVQVLGA HHHCCCHHHHCHHHCCHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCHHHHHH QIVPFLEAYAFEYLAREQTLEAEPRAAAARLRRIVDDETAFWSETFARLMRNDYLQEGLR HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FIMVQRWAQAPSKRRALARATASGLLDMLPEALRPALHGDLPDDALLEKVAASVGVTGRQ HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCC HAYWQFYLPTSTAKCNLLYALGRRPDRAFAFAGAAFAAEAEWLAFGAALERACAHLAPAG CEEEEEEECCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RRPGEVERRVAALAERFEQALRTIAERFGQPAYAQAVQGAAAHERLCERGRWDLGEQLLW CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHH LSSIRHYVRFAHRISDRIEAECPGIDRETFVEPFEMCSTTHVHNDHRLVTIEQGQMLFWG HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCEEECCCEEEEEECCCEEEEE NVGMQLKMDVGDKVLIPDGRLHGSTVLSGECTYHQPIIPDDWVKALVAELEAGSNAPA CCCEEEEECCCCEEECCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TQAMPLLFDFSPFVGQSERHVELIKQFSAAHAFRSAQVSELLLDDDFHRRPLRPEDFEF CCCCCHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH LKFRKPVRMHNVSRLPALASGRTLLSIYELAIARLPRSASADEWQHFSGFYGDDVQVLGA HHHCCCHHHHCHHHCCHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCHHHHHH QIVPFLEAYAFEYLAREQTLEAEPRAAAARLRRIVDDETAFWSETFARLMRNDYLQEGLR HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FIMVQRWAQAPSKRRALARATASGLLDMLPEALRPALHGDLPDDALLEKVAASVGVTGRQ HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCC HAYWQFYLPTSTAKCNLLYALGRRPDRAFAFAGAAFAAEAEWLAFGAALERACAHLAPAG CEEEEEEECCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RRPGEVERRVAALAERFEQALRTIAERFGQPAYAQAVQGAAAHERLCERGRWDLGEQLLW CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHH LSSIRHYVRFAHRISDRIEAECPGIDRETFVEPFEMCSTTHVHNDHRLVTIEQGQMLFWG HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCEEECCCEEEEEECCCEEEEE NVGMQLKMDVGDKVLIPDGRLHGSTVLSGECTYHQPIIPDDWVKALVAELEAGSNAPA CCCEEEEECCCCEEECCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA