| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is yqcI [H]
Identifier: 238024389
GI number: 238024389
Start: 1221275
End: 1222333
Strand: Direct
Name: yqcI [H]
Synonym: bglu_2g09820
Alternate gene names: 238024389
Gene position: 1221275-1222333 (Clockwise)
Preceding gene: 238024388
Following gene: 238024390
Centisome position: 43.2
GC content: 69.88
Gene sequence:
>1059_bases ATGCGATCAACCGAGGACAAGGTCAACGTGATGCCGCAATCCGACATGGCGACACCCGGCGGCGAAGGCTTCGATCCGGG CGACTGGAAGAGCCGCATCATCGCCGGACGCGCGCTCGGCGCCGCCGCCAACCCGCCGGCCTGGCTCGACGCGTCGTACC AGACGCTGCGCAAGCAGGTGATGCATCCCGACTATCCGTGCTTCTTCGGCACCATGGCCGAGAAGCGCGGCGAGATGTTC TACGCCTACGTGAACGGCAAGGACATCTCGCAGCTGCCCGCCACCATGCAGACCTTCGCGGAACTGGCGCTGCGGCCCGA GTACCGCAAGAACAACATCGCGGTGTTCTTCGAGCCGGACCCGGAGCCGCTCTCGCACGAGGCCTATCAGCAGCACTTCT GGCAGATCCTGCAATACCTGCACGACGTCGATCCCGATCCGCAGGCCGACGCGCAGCCCGATCCGTCCGACGGCGACTGG GAGTTCTCGTTCGCGGGCGTGGAGACCTTCGTGGTCTGCGCCTGCCCGTCGTTCCGCGCGCGCCACAGCCGCAACCTCGG GCCGGGCATGGTGCTGCTGTTCCAGCCGCGCAGCGTGTTCGTCGACACCATCACCAACAAGGTGATCGGCCGCGAGGCGC GCAACCAGGTGCGCAAGCGCCTGGAAACCTGGGACGAGGTGGCGGCCCACCCGGACCTGGGCTTCTACGGCGATCCGGGC AACCTCGAATGGAAGCAGTATTTCCTCGACGACGCGAACCAGCCGGCCGACGACCGCTGCCCGTTCCTCAAGCGCCAGAG GCAGAACGTGGAGGCGGCCCGCGCCGCGTTCGGCCAGGCCGGCGCCGCGGAGGTGGTGATCGCCGCCGACTTCGCGCCCC CGCACCCGGGCGTGGTGCGGGCACGGCCCGCCGCGGCCGACCAGGCCGGCGCGCGGCACTGGCAGCAGCACCGCATCGTG GCGCAGCAGGACCCATACGGCGCGGCGCCGGCCTGGCGCGGCCAGGACCATCGCCACGGACCGCAGGCGCGCGAGCGCCA CGAGTTCGGCGAGGAATGA
Upstream 100 bases:
>100_bases GCCTGAGCCGCCTCCGGCAAGCATCCGCTTTGAATGGTGGGCCGTGCATTCCGCGCGGCCCGGCACGCTCGCCCGCGCAG GCGACGAACGAGGATATGAA
Downstream 100 bases:
>100_bases CGAGGGCCGGGCGCGCGTCGGGCCCGGATCGCCGCGCCTGACGCGGCGCGGTAAAGAAGCAGGGCGAGAGGCAGGACGAG GGACGAAATGGCAGACAACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues MRSTEDKVNVMPQSDMATPGGEGFDPGDWKSRIIAGRALGAAANPPAWLDASYQTLRKQVMHPDYPCFFGTMAEKRGEMF YAYVNGKDISQLPATMQTFAELALRPEYRKNNIAVFFEPDPEPLSHEAYQQHFWQILQYLHDVDPDPQADAQPDPSDGDW EFSFAGVETFVVCACPSFRARHSRNLGPGMVLLFQPRSVFVDTITNKVIGREARNQVRKRLETWDEVAAHPDLGFYGDPG NLEWKQYFLDDANQPADDRCPFLKRQRQNVEAARAAFGQAGAAEVVIAADFAPPHPGVVRARPAAADQAGARHWQQHRIV AQQDPYGAAPAWRGQDHRHGPQARERHEFGEE
Sequences:
>Translated_352_residues MRSTEDKVNVMPQSDMATPGGEGFDPGDWKSRIIAGRALGAAANPPAWLDASYQTLRKQVMHPDYPCFFGTMAEKRGEMF YAYVNGKDISQLPATMQTFAELALRPEYRKNNIAVFFEPDPEPLSHEAYQQHFWQILQYLHDVDPDPQADAQPDPSDGDW EFSFAGVETFVVCACPSFRARHSRNLGPGMVLLFQPRSVFVDTITNKVIGREARNQVRKRLETWDEVAAHPDLGFYGDPG NLEWKQYFLDDANQPADDRCPFLKRQRQNVEAARAAFGQAGAAEVVIAADFAPPHPGVVRARPAAADQAGARHWQQHRIV AQQDPYGAAPAWRGQDHRHGPQARERHEFGEE >Mature_352_residues MRSTEDKVNVMPQSDMATPGGEGFDPGDWKSRIIAGRALGAAANPPAWLDASYQTLRKQVMHPDYPCFFGTMAEKRGEMF YAYVNGKDISQLPATMQTFAELALRPEYRKNNIAVFFEPDPEPLSHEAYQQHFWQILQYLHDVDPDPQADAQPDPSDGDW EFSFAGVETFVVCACPSFRARHSRNLGPGMVLLFQPRSVFVDTITNKVIGREARNQVRKRLETWDEVAAHPDLGFYGDPG NLEWKQYFLDDANQPADDRCPFLKRQRQNVEAARAAFGQAGAAEVVIAADFAPPHPGVVRARPAAADQAGARHWQQHRIV AQQDPYGAAPAWRGQDHRHGPQARERHEFGEE
Specific function: Unknown
COG id: COG3403
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014988 [H]
Pfam domain/function: PF08892 YqcI_YcgG [H]
EC number: NA
Molecular weight: Translated: 39569; Mature: 39569
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSTEDKVNVMPQSDMATPGGEGFDPGDWKSRIIAGRALGAAANPPAWLDASYQTLRKQV CCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHH MHPDYPCFFGTMAEKRGEMFYAYVNGKDISQLPATMQTFAELALRPEYRKNNIAVFFEPD CCCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCC PEPLSHEAYQQHFWQILQYLHDVDPDPQADAQPDPSDGDWEFSFAGVETFVVCACPSFRA CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCHHH RHSRNLGPGMVLLFQPRSVFVDTITNKVIGREARNQVRKRLETWDEVAAHPDLGFYGDPG HHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC NLEWKQYFLDDANQPADDRCPFLKRQRQNVEAARAAFGQAGAAEVVIAADFAPPHPGVVR CCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEE ARPAAADQAGARHWQQHRIVAQQDPYGAAPAWRGQDHRHGPQARERHEFGEE CCCCCHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC >Mature Secondary Structure MRSTEDKVNVMPQSDMATPGGEGFDPGDWKSRIIAGRALGAAANPPAWLDASYQTLRKQV CCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHH MHPDYPCFFGTMAEKRGEMFYAYVNGKDISQLPATMQTFAELALRPEYRKNNIAVFFEPD CCCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCC PEPLSHEAYQQHFWQILQYLHDVDPDPQADAQPDPSDGDWEFSFAGVETFVVCACPSFRA CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCHHH RHSRNLGPGMVLLFQPRSVFVDTITNKVIGREARNQVRKRLETWDEVAAHPDLGFYGDPG HHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC NLEWKQYFLDDANQPADDRCPFLKRQRQNVEAARAAFGQAGAAEVVIAADFAPPHPGVVR CCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEE ARPAAADQAGARHWQQHRIVAQQDPYGAAPAWRGQDHRHGPQARERHEFGEE CCCCCHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7704261; 8969508; 9384377; 7489895 [H]