Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is yqcI [H]

Identifier: 238024389

GI number: 238024389

Start: 1221275

End: 1222333

Strand: Direct

Name: yqcI [H]

Synonym: bglu_2g09820

Alternate gene names: 238024389

Gene position: 1221275-1222333 (Clockwise)

Preceding gene: 238024388

Following gene: 238024390

Centisome position: 43.2

GC content: 69.88

Gene sequence:

>1059_bases
ATGCGATCAACCGAGGACAAGGTCAACGTGATGCCGCAATCCGACATGGCGACACCCGGCGGCGAAGGCTTCGATCCGGG
CGACTGGAAGAGCCGCATCATCGCCGGACGCGCGCTCGGCGCCGCCGCCAACCCGCCGGCCTGGCTCGACGCGTCGTACC
AGACGCTGCGCAAGCAGGTGATGCATCCCGACTATCCGTGCTTCTTCGGCACCATGGCCGAGAAGCGCGGCGAGATGTTC
TACGCCTACGTGAACGGCAAGGACATCTCGCAGCTGCCCGCCACCATGCAGACCTTCGCGGAACTGGCGCTGCGGCCCGA
GTACCGCAAGAACAACATCGCGGTGTTCTTCGAGCCGGACCCGGAGCCGCTCTCGCACGAGGCCTATCAGCAGCACTTCT
GGCAGATCCTGCAATACCTGCACGACGTCGATCCCGATCCGCAGGCCGACGCGCAGCCCGATCCGTCCGACGGCGACTGG
GAGTTCTCGTTCGCGGGCGTGGAGACCTTCGTGGTCTGCGCCTGCCCGTCGTTCCGCGCGCGCCACAGCCGCAACCTCGG
GCCGGGCATGGTGCTGCTGTTCCAGCCGCGCAGCGTGTTCGTCGACACCATCACCAACAAGGTGATCGGCCGCGAGGCGC
GCAACCAGGTGCGCAAGCGCCTGGAAACCTGGGACGAGGTGGCGGCCCACCCGGACCTGGGCTTCTACGGCGATCCGGGC
AACCTCGAATGGAAGCAGTATTTCCTCGACGACGCGAACCAGCCGGCCGACGACCGCTGCCCGTTCCTCAAGCGCCAGAG
GCAGAACGTGGAGGCGGCCCGCGCCGCGTTCGGCCAGGCCGGCGCCGCGGAGGTGGTGATCGCCGCCGACTTCGCGCCCC
CGCACCCGGGCGTGGTGCGGGCACGGCCCGCCGCGGCCGACCAGGCCGGCGCGCGGCACTGGCAGCAGCACCGCATCGTG
GCGCAGCAGGACCCATACGGCGCGGCGCCGGCCTGGCGCGGCCAGGACCATCGCCACGGACCGCAGGCGCGCGAGCGCCA
CGAGTTCGGCGAGGAATGA

Upstream 100 bases:

>100_bases
GCCTGAGCCGCCTCCGGCAAGCATCCGCTTTGAATGGTGGGCCGTGCATTCCGCGCGGCCCGGCACGCTCGCCCGCGCAG
GCGACGAACGAGGATATGAA

Downstream 100 bases:

>100_bases
CGAGGGCCGGGCGCGCGTCGGGCCCGGATCGCCGCGCCTGACGCGGCGCGGTAAAGAAGCAGGGCGAGAGGCAGGACGAG
GGACGAAATGGCAGACAACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MRSTEDKVNVMPQSDMATPGGEGFDPGDWKSRIIAGRALGAAANPPAWLDASYQTLRKQVMHPDYPCFFGTMAEKRGEMF
YAYVNGKDISQLPATMQTFAELALRPEYRKNNIAVFFEPDPEPLSHEAYQQHFWQILQYLHDVDPDPQADAQPDPSDGDW
EFSFAGVETFVVCACPSFRARHSRNLGPGMVLLFQPRSVFVDTITNKVIGREARNQVRKRLETWDEVAAHPDLGFYGDPG
NLEWKQYFLDDANQPADDRCPFLKRQRQNVEAARAAFGQAGAAEVVIAADFAPPHPGVVRARPAAADQAGARHWQQHRIV
AQQDPYGAAPAWRGQDHRHGPQARERHEFGEE

Sequences:

>Translated_352_residues
MRSTEDKVNVMPQSDMATPGGEGFDPGDWKSRIIAGRALGAAANPPAWLDASYQTLRKQVMHPDYPCFFGTMAEKRGEMF
YAYVNGKDISQLPATMQTFAELALRPEYRKNNIAVFFEPDPEPLSHEAYQQHFWQILQYLHDVDPDPQADAQPDPSDGDW
EFSFAGVETFVVCACPSFRARHSRNLGPGMVLLFQPRSVFVDTITNKVIGREARNQVRKRLETWDEVAAHPDLGFYGDPG
NLEWKQYFLDDANQPADDRCPFLKRQRQNVEAARAAFGQAGAAEVVIAADFAPPHPGVVRARPAAADQAGARHWQQHRIV
AQQDPYGAAPAWRGQDHRHGPQARERHEFGEE
>Mature_352_residues
MRSTEDKVNVMPQSDMATPGGEGFDPGDWKSRIIAGRALGAAANPPAWLDASYQTLRKQVMHPDYPCFFGTMAEKRGEMF
YAYVNGKDISQLPATMQTFAELALRPEYRKNNIAVFFEPDPEPLSHEAYQQHFWQILQYLHDVDPDPQADAQPDPSDGDW
EFSFAGVETFVVCACPSFRARHSRNLGPGMVLLFQPRSVFVDTITNKVIGREARNQVRKRLETWDEVAAHPDLGFYGDPG
NLEWKQYFLDDANQPADDRCPFLKRQRQNVEAARAAFGQAGAAEVVIAADFAPPHPGVVRARPAAADQAGARHWQQHRIV
AQQDPYGAAPAWRGQDHRHGPQARERHEFGEE

Specific function: Unknown

COG id: COG3403

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014988 [H]

Pfam domain/function: PF08892 YqcI_YcgG [H]

EC number: NA

Molecular weight: Translated: 39569; Mature: 39569

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSTEDKVNVMPQSDMATPGGEGFDPGDWKSRIIAGRALGAAANPPAWLDASYQTLRKQV
CCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHH
MHPDYPCFFGTMAEKRGEMFYAYVNGKDISQLPATMQTFAELALRPEYRKNNIAVFFEPD
CCCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCC
PEPLSHEAYQQHFWQILQYLHDVDPDPQADAQPDPSDGDWEFSFAGVETFVVCACPSFRA
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCHHH
RHSRNLGPGMVLLFQPRSVFVDTITNKVIGREARNQVRKRLETWDEVAAHPDLGFYGDPG
HHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
NLEWKQYFLDDANQPADDRCPFLKRQRQNVEAARAAFGQAGAAEVVIAADFAPPHPGVVR
CCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEE
ARPAAADQAGARHWQQHRIVAQQDPYGAAPAWRGQDHRHGPQARERHEFGEE
CCCCCHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC
>Mature Secondary Structure
MRSTEDKVNVMPQSDMATPGGEGFDPGDWKSRIIAGRALGAAANPPAWLDASYQTLRKQV
CCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHH
MHPDYPCFFGTMAEKRGEMFYAYVNGKDISQLPATMQTFAELALRPEYRKNNIAVFFEPD
CCCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCC
PEPLSHEAYQQHFWQILQYLHDVDPDPQADAQPDPSDGDWEFSFAGVETFVVCACPSFRA
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCHHH
RHSRNLGPGMVLLFQPRSVFVDTITNKVIGREARNQVRKRLETWDEVAAHPDLGFYGDPG
HHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
NLEWKQYFLDDANQPADDRCPFLKRQRQNVEAARAAFGQAGAAEVVIAADFAPPHPGVVR
CCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEE
ARPAAADQAGARHWQQHRIVAQQDPYGAAPAWRGQDHRHGPQARERHEFGEE
CCCCCHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895 [H]