| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is cysQ [H]
Identifier: 238024359
GI number: 238024359
Start: 1171997
End: 1172803
Strand: Direct
Name: cysQ [H]
Synonym: bglu_2g09520
Alternate gene names: 238024359
Gene position: 1171997-1172803 (Clockwise)
Preceding gene: 238024357
Following gene: 238024361
Centisome position: 41.45
GC content: 71.87
Gene sequence:
>807_bases ATGACTGCCCTTCGCGATTCGCTGGAACGCATTGCCATCGACGCCGGCGCGGCGATCCTCGAGGTGTACCGCGCCGGCCC CGACGTGGCTTACAAGAACGATCATTCGCCCGTGACCGACGCCGACCAGCGTGCCGAGGCGATCATCCTGTCCGGGCTGG CCGCCGCGTTTCCCGGCGTCCCGGTGGTGGCCGAGGAAGCGGTCGCCGCCGGGCGCGTGTCCGAGATCGGCGGCGGCCGG TTCTTCCTCGTCGATCCGCTGGACGGAACCCGGGAGTTCATCGCCCGGCGCGACGATTTCACCGTCAATATCGCGCTGAT CGAGCAGGGCGTGCCGGTGGCCGGCATCGTGCTCGCGCCGGCGCTGCGCTGCGCCTACGTGGCGGTCGAGGGCCGCGCCG AGAAGCTCGTGCTCGGCGCGGATCTGAGGGTCGAGGCGCGCCGGCCGATCCGCACGCGCCCGCGCGGGGCGAGCCTGACG GCCGTGGTCAGCCGCTCCCACCACAGCCGCGAAACCGAAGCGTTTCTCGCCGATCATGGCGTGACCGACCAGGCGAGCGC CGGCTCGTCGCTGAAGTTCTGCCTGCTTGCGGAAGGCCGCGCGGATGTCTACCCGCGCTTCGGCCGCACCATGGAGTGGG ACACGGCGGCCGGCCACGCGGTGCTGAGCGCGGCCGGCGGAACGGTGGTGCGCGCGGACGGCGCCCGGCTCGACTACGGC AAGACCCGCCAGCAGGGCGACAGCGATTTCGCCAATCCGCACTTCATCGCCTGGGCGGATGGCGCGTCGGTGACGCCGCG CCGATAA
Upstream 100 bases:
>100_bases CGCGCGAAGCGCCGCGGCGGCGACCGGACACGCCCGGCCACGACGTGCCGGCCCGTCCGCCTGCATCGCGGTGCGCCTCG CCTGGAAGCTTGAATCGACC
Downstream 100 bases:
>100_bases GCCGCTCGACGCCAATCCAGGCCGATGACGCCGGCTGCCATCACGCCAGCGCCGTCCTTTCGTCAACGACACCGTCAACG AAACGGGCGCATCGACGCCG
Product: inositol monophosphatase
Products: NA
Alternate protein names: 3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase; 3'-phosphoadenosine 5'-phosphate phosphatase; PAP phosphatase; DPNPase [H]
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MTALRDSLERIAIDAGAAILEVYRAGPDVAYKNDHSPVTDADQRAEAIILSGLAAAFPGVPVVAEEAVAAGRVSEIGGGR FFLVDPLDGTREFIARRDDFTVNIALIEQGVPVAGIVLAPALRCAYVAVEGRAEKLVLGADLRVEARRPIRTRPRGASLT AVVSRSHHSRETEAFLADHGVTDQASAGSSLKFCLLAEGRADVYPRFGRTMEWDTAAGHAVLSAAGGTVVRADGARLDYG KTRQQGDSDFANPHFIAWADGASVTPRR
Sequences:
>Translated_268_residues MTALRDSLERIAIDAGAAILEVYRAGPDVAYKNDHSPVTDADQRAEAIILSGLAAAFPGVPVVAEEAVAAGRVSEIGGGR FFLVDPLDGTREFIARRDDFTVNIALIEQGVPVAGIVLAPALRCAYVAVEGRAEKLVLGADLRVEARRPIRTRPRGASLT AVVSRSHHSRETEAFLADHGVTDQASAGSSLKFCLLAEGRADVYPRFGRTMEWDTAAGHAVLSAAGGTVVRADGARLDYG KTRQQGDSDFANPHFIAWADGASVTPRR >Mature_267_residues TALRDSLERIAIDAGAAILEVYRAGPDVAYKNDHSPVTDADQRAEAIILSGLAAAFPGVPVVAEEAVAAGRVSEIGGGRF FLVDPLDGTREFIARRDDFTVNIALIEQGVPVAGIVLAPALRCAYVAVEGRAEKLVLGADLRVEARRPIRTRPRGASLTA VVSRSHHSRETEAFLADHGVTDQASAGSSLKFCLLAEGRADVYPRFGRTMEWDTAAGHAVLSAAGGTVVRADGARLDYGK TRQQGDSDFANPHFIAWADGASVTPRR
Specific function: Converts 3'(2')-phosphoadenosine 5'-phosphate (PAP) to AMP. May also convert adenosine 3'-phosphate 5'-phosphosulfate (PAPS) to adenosine 5'-phosphosulfate (APS) [H]
COG id: COG1218
COG function: function code P; 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase
Gene ontology:
Cell location: Cytoplasm. Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI5031789, Length=241, Percent_Identity=26.9709543568465, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI221625487, Length=236, Percent_Identity=27.1186440677966, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI7657236, Length=242, Percent_Identity=28.5123966942149, Blast_Score=69, Evalue=3e-12, Organism=Escherichia coli, GI1790659, Length=254, Percent_Identity=44.8818897637795, Blast_Score=171, Evalue=5e-44, Organism=Escherichia coli, GI1788882, Length=234, Percent_Identity=26.0683760683761, Blast_Score=61, Evalue=9e-11, Organism=Caenorhabditis elegans, GI193202572, Length=236, Percent_Identity=25.4237288135593, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI193202570, Length=247, Percent_Identity=24.6963562753036, Blast_Score=67, Evalue=9e-12, Organism=Saccharomyces cerevisiae, GI6320493, Length=216, Percent_Identity=29.1666666666667, Blast_Score=85, Evalue=1e-17, Organism=Drosophila melanogaster, GI24664926, Length=207, Percent_Identity=27.0531400966184, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24664922, Length=246, Percent_Identity=27.6422764227642, Blast_Score=77, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006240 - InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.7 [H]
Molecular weight: Translated: 28415; Mature: 28284
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: PS00630 IMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALRDSLERIAIDAGAAILEVYRAGPDVAYKNDHSPVTDADQRAEAIILSGLAAAFPGV CCHHHHHHHHHHHHCCHHHHHHHHCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHCCCC PVVAEEAVAAGRVSEIGGGRFFLVDPLDGTREFIARRDDFTVNIALIEQGVPVAGIVLAP CHHHHHHHHHCCHHHCCCCEEEEECCCCCHHHHHHCCCCCEEEEEEEECCCCCHHHHHHH ALRCAYVAVEGRAEKLVLGADLRVEARRPIRTRPRGASLTAVVSRSHHSRETEAFLADHG HHHEEEEEECCCCEEEEEECCEEEECCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCC VTDQASAGSSLKFCLLAEGRADVYPRFGRTMEWDTAAGHAVLSAAGGTVVRADGARLDYG CCCCCCCCCCEEEEEEECCCCCCCCCCCCEEECCCCCCCEEEEECCCEEEEECCCCCCCC KTRQQGDSDFANPHFIAWADGASVTPRR CCCCCCCCCCCCCCEEEEECCCCCCCCC >Mature Secondary Structure TALRDSLERIAIDAGAAILEVYRAGPDVAYKNDHSPVTDADQRAEAIILSGLAAAFPGV CHHHHHHHHHHHHCCHHHHHHHHCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHCCCC PVVAEEAVAAGRVSEIGGGRFFLVDPLDGTREFIARRDDFTVNIALIEQGVPVAGIVLAP CHHHHHHHHHCCHHHCCCCEEEEECCCCCHHHHHHCCCCCEEEEEEEECCCCCHHHHHHH ALRCAYVAVEGRAEKLVLGADLRVEARRPIRTRPRGASLTAVVSRSHHSRETEAFLADHG HHHEEEEEECCCCEEEEEECCEEEECCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCC VTDQASAGSSLKFCLLAEGRADVYPRFGRTMEWDTAAGHAVLSAAGGTVVRADGARLDYG CCCCCCCCCCEEEEEEECCCCCCCCCCCCEEECCCCCCCEEEEECCCEEEEECCCCCCCC KTRQQGDSDFANPHFIAWADGASVTPRR CCCCCCCCCCCCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10993077 [H]