| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024310
Identifier: 238024310
GI number: 238024310
Start: 1088761
End: 1089915
Strand: Direct
Name: 238024310
Synonym: bglu_2g08980
Alternate gene names: NA
Gene position: 1088761-1089915 (Clockwise)
Preceding gene: 238024306
Following gene: 238024313
Centisome position: 38.51
GC content: 67.88
Gene sequence:
>1155_bases ATGCATGACATTGCTCGCGCCGCGGTGGTCCTGGGTGCGGGGCTTGGCATCGGAATGGCCGCGCTGCCGGCCGCCCATGC CGCACCGACGGCCGGTGCGCTGGTCGACCAGGCGCAGCTGCAGGCCGAAGCCGCGGCGCAGGCCGACTGGCGCGAGAACG TTCGGCAGTTCGCGCCGCAGGCGGAGGGCTGCTATCACGCCAGCTATCCGAACCTGAAATGGAACAAGGTGGCGTGCGGC CCGGTATCGGGCTATCGATCCGCCCGCCCCAATCTCGCCCGGCTGAACGCCACGCGGGCGTTTCGCGCCGCCTCGCAGCA GGTGGTCGGCAACGGCACCGATTACTCGATCCAGGCGCCGGCCGGCGCGCTGATCAGCGCTGCGGTGGGGAGCTTCCCGT CGGTCAGCGGCGTGCGCTCGGAGAAGGGGGTCAACGCGCCGTTCGGCTCCGGCCAGAGCAACGGCATCACGGGCGCGAAT CAATACACGCTGCAGCTGAACACCAACCTGTTCCAGGGCTCGGCGGCGTGCAACGGCTATTCGGGATGCTTCGCCTGGCA GCAGTACATCCTGGTGTCGGACGACGTGAATTCGTCCGGCACGGCGCTGACCGGCACCTCCGACGTGTTCATCCAGACCT GGCTCATCAATTACGGCCAGGACGTGGACGGCGGCAACACCAACATCTGCCCCAGCGGCTATACGGACGCCGGCCAGGAC CAGGACGGCGACGACTGCTACCGCAACAGCCCGTCGGTGGTGGTCGCCAAGCAGCTGCCGATTACCGCGCTGGCGAGCCT GAAGCTGTCGGGCAGCGCCACCACGAACGGCACCGACACGGCCACCGTCACCTATGGCACGCAGGCCTACAGTTCGTCGG TGAAGGACAACGTGTCGGATATCGCGAACGGCTGGACCCAGGCGGAATTCAATGTCGTGGGCAACGCCGGCGGCTCGCGC GCGGACTTCAACTCAGGGTCCTCGCTGACCGTCAAGGTCGCGGTGAACGACGGCTCGACGGCCGCGCCGAGTTGCGTCGG GCCGAGCAGCGGCGGCACCACCGGCGAGACCAACAATCTCACGCTCGGCAAATGCACGGCATCCGCCGGCTCGGGCTCGA CCTCGCCGTCGATCCAGTTCACCGAATCGAACTGA
Upstream 100 bases:
>100_bases GTCGTTCGGAACGTCCAGGCTTTCGAATCCCCGAACGCCGGACACCAAACAGCATTGCTTCCATTGGAGAAAACAGATGC GATCGAGGACCTTGCTTGAC
Downstream 100 bases:
>100_bases CGCGATGATCGCGCTTCGCGCCTGAGGCCTGCCTGAAGCCACGCCGAGGCGGCCGCGCCGCCTCGGCGCAGCGGCACGCG CGCCGCTCCGGGCTTCAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MHDIARAAVVLGAGLGIGMAALPAAHAAPTAGALVDQAQLQAEAAAQADWRENVRQFAPQAEGCYHASYPNLKWNKVACG PVSGYRSARPNLARLNATRAFRAASQQVVGNGTDYSIQAPAGALISAAVGSFPSVSGVRSEKGVNAPFGSGQSNGITGAN QYTLQLNTNLFQGSAACNGYSGCFAWQQYILVSDDVNSSGTALTGTSDVFIQTWLINYGQDVDGGNTNICPSGYTDAGQD QDGDDCYRNSPSVVVAKQLPITALASLKLSGSATTNGTDTATVTYGTQAYSSSVKDNVSDIANGWTQAEFNVVGNAGGSR ADFNSGSSLTVKVAVNDGSTAAPSCVGPSSGGTTGETNNLTLGKCTASAGSGSTSPSIQFTESN
Sequences:
>Translated_384_residues MHDIARAAVVLGAGLGIGMAALPAAHAAPTAGALVDQAQLQAEAAAQADWRENVRQFAPQAEGCYHASYPNLKWNKVACG PVSGYRSARPNLARLNATRAFRAASQQVVGNGTDYSIQAPAGALISAAVGSFPSVSGVRSEKGVNAPFGSGQSNGITGAN QYTLQLNTNLFQGSAACNGYSGCFAWQQYILVSDDVNSSGTALTGTSDVFIQTWLINYGQDVDGGNTNICPSGYTDAGQD QDGDDCYRNSPSVVVAKQLPITALASLKLSGSATTNGTDTATVTYGTQAYSSSVKDNVSDIANGWTQAEFNVVGNAGGSR ADFNSGSSLTVKVAVNDGSTAAPSCVGPSSGGTTGETNNLTLGKCTASAGSGSTSPSIQFTESN >Mature_384_residues MHDIARAAVVLGAGLGIGMAALPAAHAAPTAGALVDQAQLQAEAAAQADWRENVRQFAPQAEGCYHASYPNLKWNKVACG PVSGYRSARPNLARLNATRAFRAASQQVVGNGTDYSIQAPAGALISAAVGSFPSVSGVRSEKGVNAPFGSGQSNGITGAN QYTLQLNTNLFQGSAACNGYSGCFAWQQYILVSDDVNSSGTALTGTSDVFIQTWLINYGQDVDGGNTNICPSGYTDAGQD QDGDDCYRNSPSVVVAKQLPITALASLKLSGSATTNGTDTATVTYGTQAYSSSVKDNVSDIANGWTQAEFNVVGNAGGSR ADFNSGSSLTVKVAVNDGSTAAPSCVGPSSGGTTGETNNLTLGKCTASAGSGSTSPSIQFTESN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38987; Mature: 38987
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHDIARAAVVLGAGLGIGMAALPAAHAAPTAGALVDQAQLQAEAAAQADWRENVRQFAPQ CCHHHHHHHHHHCCCCCCHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC AEGCYHASYPNLKWNKVACGPVSGYRSARPNLARLNATRAFRAASQQVVGNGTDYSIQAP CCCCEECCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECC AGALISAAVGSFPSVSGVRSEKGVNAPFGSGQSNGITGANQYTLQLNTNLFQGSAACNGY CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEECCCCCCCC SGCFAWQQYILVSDDVNSSGTALTGTSDVFIQTWLINYGQDVDGGNTNICPSGYTDAGQD CHHEEEEEEEEEECCCCCCCCEEECCCHHEEEEEEHHCCCCCCCCCCCCCCCCCCCCCCC QDGDDCYRNSPSVVVAKQLPITALASLKLSGSATTNGTDTATVTYGTQAYSSSVKDNVSD CCCCHHHCCCCCEEEEECCCEEEEEEEEECCCCCCCCCCEEEEEECCHHHHHHHHHHHHH IANGWTQAEFNVVGNAGGSRADFNSGSSLTVKVAVNDGSTAAPSCVGPSSGGTTGETNNL HHCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCE TLGKCTASAGSGSTSPSIQFTESN EEEEEECCCCCCCCCCCEEEECCC >Mature Secondary Structure MHDIARAAVVLGAGLGIGMAALPAAHAAPTAGALVDQAQLQAEAAAQADWRENVRQFAPQ CCHHHHHHHHHHCCCCCCHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC AEGCYHASYPNLKWNKVACGPVSGYRSARPNLARLNATRAFRAASQQVVGNGTDYSIQAP CCCCEECCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECC AGALISAAVGSFPSVSGVRSEKGVNAPFGSGQSNGITGANQYTLQLNTNLFQGSAACNGY CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEECCCCCCCC SGCFAWQQYILVSDDVNSSGTALTGTSDVFIQTWLINYGQDVDGGNTNICPSGYTDAGQD CHHEEEEEEEEEECCCCCCCCEEECCCHHEEEEEEHHCCCCCCCCCCCCCCCCCCCCCCC QDGDDCYRNSPSVVVAKQLPITALASLKLSGSATTNGTDTATVTYGTQAYSSSVKDNVSD CCCCHHHCCCCCEEEEECCCEEEEEEEEECCCCCCCCCCEEEEEECCHHHHHHHHHHHHH IANGWTQAEFNVVGNAGGSRADFNSGSSLTVKVAVNDGSTAAPSCVGPSSGGTTGETNNL HHCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCE TLGKCTASAGSGSTSPSIQFTESN EEEEEECCCCCCCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA