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The map label for this gene is nahR [H]

Identifier: 238024306

GI number: 238024306

Start: 1082560

End: 1083465

Strand: Direct

Name: nahR [H]

Synonym: bglu_2g08940

Alternate gene names: 238024306

Gene position: 1082560-1083465 (Clockwise)

Preceding gene: 238024305

Following gene: 238024310

Centisome position: 38.29

GC content: 67.99

Gene sequence:

>906_bases
ATGAATCTACGCAGCGTTGATCTGAACCTGCTGGTGGTGCTCGATGCGCTGCTGAGCGAAAAGCACGTGACGCGGGCGGC
CACCAAGATCGGGCTGAGCCAGTCGGCGATGAGCAGTGCGCTCGGGCGCCTGCGAACGCTGCTGCAGGACGATCTGCTGA
TCCGCAACGCCTCGGGCATGGAGCCGACGCCGCGCGCGCTGGAGCTGGAGGAGCCGCTGCGGCAACTGCTGCGCCAGGCC
GAGCGGCTGATCAAATCGAGCAGTTCGTTCGATCCCGCCACGAGCGCCCAGCATTACCGGCTTCGCATGTCGGACGTGCT
CGAGCATCTGCTGATGCCGGCCCTGCTCGAACAGCTCGGGCAGCTGGCGCCGCGGGTGACGATCGACGTGGTGCACCTGC
CGCCGCGCCAGACCGTGGCGGCGCTCGACGTGGACGATATCGATCTTGCGGTGAGCATGGGCCTGGAGCATACGGGCGCG
GTGCGCGCGACGCCGCTGTTCGAGGATCGCATGGTGTGCGTGCTGGCGCGCGAGCACCGGCACGCCGGGGACGAAATGAC
GATGGAGCTGTTTCTCGCGCTGCCGCATCTCAAGGTGTCGATCAGCGCAACCGACGGCCGCTACGTGGACGCCGCGCTGG
CGCGGATGCAGCGGGTCAGGAGCGTGGCGCTGAACGTGCCGCACTGGCTCGTGGTTCCGCACTTGTTGCGCCACTCCTCG
ATGATCGCGGTGATGTCCGAGCGGCTGGCGCGGCGCTTCGCGCAGGACGGTCTCGTGATCAAGGCGCTGCCGTTCGAATC
GACGCGGTTTCATTGGTCGATGTACTGGCACCGGCGCCACGACAGCGTGCCCGCGCAGGCGTGGATGCGCGAGCGGATTC
GCACGGCGGCCGGCGGCCTGACCTAG

Upstream 100 bases:

>100_bases
TCCTCCGCCGCCGGCTTCGATCCGGTGCGCGGCCCGTCGTGTCGCGCCATGCCGGCGCGTGTCCCGAGCCTCGTCTCAAC
CCACCAGAGCGCCAGTCCCT

Downstream 100 bases:

>100_bases
CGCCCGCGCGCGCCCGCCGCCCGTGCCGTGCGGCGCGGGGGCGAGGGCAAGCGCGGCTGCGGCCCTACTCGTCGATCACG
GCCGGGCCGGAGACGACGCT

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MNLRSVDLNLLVVLDALLSEKHVTRAATKIGLSQSAMSSALGRLRTLLQDDLLIRNASGMEPTPRALELEEPLRQLLRQA
ERLIKSSSSFDPATSAQHYRLRMSDVLEHLLMPALLEQLGQLAPRVTIDVVHLPPRQTVAALDVDDIDLAVSMGLEHTGA
VRATPLFEDRMVCVLAREHRHAGDEMTMELFLALPHLKVSISATDGRYVDAALARMQRVRSVALNVPHWLVVPHLLRHSS
MIAVMSERLARRFAQDGLVIKALPFESTRFHWSMYWHRRHDSVPAQAWMRERIRTAAGGLT

Sequences:

>Translated_301_residues
MNLRSVDLNLLVVLDALLSEKHVTRAATKIGLSQSAMSSALGRLRTLLQDDLLIRNASGMEPTPRALELEEPLRQLLRQA
ERLIKSSSSFDPATSAQHYRLRMSDVLEHLLMPALLEQLGQLAPRVTIDVVHLPPRQTVAALDVDDIDLAVSMGLEHTGA
VRATPLFEDRMVCVLAREHRHAGDEMTMELFLALPHLKVSISATDGRYVDAALARMQRVRSVALNVPHWLVVPHLLRHSS
MIAVMSERLARRFAQDGLVIKALPFESTRFHWSMYWHRRHDSVPAQAWMRERIRTAAGGLT
>Mature_301_residues
MNLRSVDLNLLVVLDALLSEKHVTRAATKIGLSQSAMSSALGRLRTLLQDDLLIRNASGMEPTPRALELEEPLRQLLRQA
ERLIKSSSSFDPATSAQHYRLRMSDVLEHLLMPALLEQLGQLAPRVTIDVVHLPPRQTVAALDVDDIDLAVSMGLEHTGA
VRATPLFEDRMVCVLAREHRHAGDEMTMELFLALPHLKVSISATDGRYVDAALARMQRVRSVALNVPHWLVVPHLLRHSS
MIAVMSERLARRFAQDGLVIKALPFESTRFHWSMYWHRRHDSVPAQAWMRERIRTAAGGLT

Specific function: Regulates the expression of the naphthalene (nahA-F) and salicylate (nahG-M) metabolism genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081684, Length=292, Percent_Identity=26.7123287671233, Blast_Score=113, Evalue=2e-26,
Organism=Escherichia coli, GI1790147, Length=309, Percent_Identity=22.9773462783171, Blast_Score=87, Evalue=2e-18,

Paralogues:

None

Copy number: 825 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33834; Mature: 33834

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLRSVDLNLLVVLDALLSEKHVTRAATKIGLSQSAMSSALGRLRTLLQDDLLIRNASGM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEECCCCC
EPTPRALELEEPLRQLLRQAERLIKSSSSFDPATSAQHYRLRMSDVLEHLLMPALLEQLG
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QLAPRVTIDVVHLPPRQTVAALDVDDIDLAVSMGLEHTGAVRATPLFEDRMVCVLAREHR
HHCCCEEEEEEECCCCCCEEECCCCCHHHHHHCCCCCCCCEEECCCHHCHHHHEEEHHHH
HAGDEMTMELFLALPHLKVSISATDGRYVDAALARMQRVRSVALNVPHWLVVPHLLRHSS
CCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
MIAVMSERLARRFAQDGLVIKALPFESTRFHWSMYWHRRHDSVPAQAWMRERIRTAAGGL
HHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCC
T
C
>Mature Secondary Structure
MNLRSVDLNLLVVLDALLSEKHVTRAATKIGLSQSAMSSALGRLRTLLQDDLLIRNASGM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEECCCCC
EPTPRALELEEPLRQLLRQAERLIKSSSSFDPATSAQHYRLRMSDVLEHLLMPALLEQLG
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QLAPRVTIDVVHLPPRQTVAALDVDDIDLAVSMGLEHTGAVRATPLFEDRMVCVLAREHR
HHCCCEEEEEEECCCCCCEEECCCCCHHHHHHCCCCCCCCEEECCCHHCHHHHEEEHHHH
HAGDEMTMELFLALPHLKVSISATDGRYVDAALARMQRVRSVALNVPHWLVVPHLLRHSS
CCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
MIAVMSERLARRFAQDGLVIKALPFESTRFHWSMYWHRRHDSVPAQAWMRERIRTAAGGL
HHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCC
T
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2703465; 2848005 [H]