Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is yebQ [H]

Identifier: 238024309

GI number: 238024309

Start: 1086407

End: 1087798

Strand: Reverse

Name: yebQ [H]

Synonym: bglu_2g08970

Alternate gene names: 238024309

Gene position: 1087798-1086407 (Counterclockwise)

Preceding gene: 238024311

Following gene: 238024308

Centisome position: 38.47

GC content: 71.05

Gene sequence:

>1392_bases
ATGTCCGCCAACCACCTGCAGTCGCTGCGCGTCCCGCATCAGGACGGCCTGCCGACGAACCAACGGATCGCGGCGCTGAT
CGCCATTTCACTGGCCGTCGCAATGGCCACCCTCGACACCGCGATTACCAACACCGCCCTGCCCACCATCGCGGCCAGTA
TCGGTGCCGACCACGCCTCCGTGATCTGGGTGGTCAACGCCTATCAGCTGGCGATGGTCGCGACGCTGCTGCCGTTCGCG
TCGCTGGGCGAGATCGCGGGACACCGGCGCGTCTACATCGCGGGGCTGGCGCTCTTCAGCGCCAGTTCGCTGGCCTGCGG
CCTCGCGTGGTCGCTGCCCACGCTCGCCACGGCGCGCGCGCTGCAAGGCGTGGGAGCGGCCGCCATCATGAGCGTCAATA
CCGCGCTGGTCCGCTTCTCCTATCCGGCACGGCTGCTCGGGCGCGGCGTGGGACTGAACGCGCTGGTGGTGGCCGTGTCG
TTCACGGTGGGCCCGACCGTGGCGTCGGCGATCCTGTCCGTGACGACCTGGCACTGGCTGTTCCTCGTCAACGTGCCGGT
GGGCCTGGCCGCCATCGCGATGGCGGCCGGCACACTGCCGGTCACGCAACGCGCCCGGCACGGCTTCGACATGGCCGCCG
CGCTGCTTTGCGCGATTTTCTTTGCATTCCTGATCCTTGGCCTGGGCACCATCGCGCACGATGGCATGACGCACACCGTC
ATCGCCGAATGGGTCATCGCAGCGCTGGGCGGCTACGCGCTGCTGCGGCGCCAGGCCAGCCATCCGGCGCCGATGCTGGC
CGTGGACCTGTTCCGGCGCCCGGTGTTCTCGCTGTCCGCGCTCACCTCGGTCTGCTCGTTCGCCACGCAGGGCTGCGCGT
TCGTCTCGCTGCCGTTCTTCCTGCAGATCGGGCTCGGCAACAGCCAGGTCGCCACGGGTTTCCTGATGACGCCCTGGCCC
GCCGTGGTGGCGGTCATGGCGCCCATCGCCGGGCGCCTTTCGGATCGCTACCCGGCCGGCGTGCTCGGCAGCGTCGGGCT
CCTGGCGCTGGCGATCGGCATGGCCTCGCTGGCCACGCTGCCGCCCGCGCCCTCGTCGTTCGCGCTCGTCTGGCGCATGG
CGCTGTGCGGTGCCGGTTTCGGCTTCTTCCAGGCGCCGAACCTGAAGGCGCTGATGGGCAGCGCGCCGCCTCGGCGCAGC
GGGGCGGCCAGCGGCATCGTCGCCACGGCACGCCTGCTCGGGCAGACGCTCGGCGCCGCGCTGGTGGCGCTGTGCTTTCA
CGCGGCGGGCACGCACGGCCCGATCGTCGCGCTCTGGACCGGCAGCGGGTTCGCGCTGATGGGCACCGTGGTCAGTTGCT
TCCGCTTGCTGCCGTACCGGCGGCAAGCCTGA

Upstream 100 bases:

>100_bases
GCTTCACCATTCATTCAGCGGATATCTCCATTTCAAACATCCATTGGATTCATTCGCGAGGCGATGCGAGAGTATCCGCT
CTCCCATTTCTCTCCTCGCC

Downstream 100 bases:

>100_bases
GCGCGCAACGTCCGGCCCGGCTCGCGGTGCGCATCACGCTCCGCGTCACGGCCGGCGATCGAATCATCCAGTGCCGGCAG
CGATATTTTCGATTGCCATT

Product: major facilitator superfamily transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 463; Mature: 462

Protein sequence:

>463_residues
MSANHLQSLRVPHQDGLPTNQRIAALIAISLAVAMATLDTAITNTALPTIAASIGADHASVIWVVNAYQLAMVATLLPFA
SLGEIAGHRRVYIAGLALFSASSLACGLAWSLPTLATARALQGVGAAAIMSVNTALVRFSYPARLLGRGVGLNALVVAVS
FTVGPTVASAILSVTTWHWLFLVNVPVGLAAIAMAAGTLPVTQRARHGFDMAAALLCAIFFAFLILGLGTIAHDGMTHTV
IAEWVIAALGGYALLRRQASHPAPMLAVDLFRRPVFSLSALTSVCSFATQGCAFVSLPFFLQIGLGNSQVATGFLMTPWP
AVVAVMAPIAGRLSDRYPAGVLGSVGLLALAIGMASLATLPPAPSSFALVWRMALCGAGFGFFQAPNLKALMGSAPPRRS
GAASGIVATARLLGQTLGAALVALCFHAAGTHGPIVALWTGSGFALMGTVVSCFRLLPYRRQA

Sequences:

>Translated_463_residues
MSANHLQSLRVPHQDGLPTNQRIAALIAISLAVAMATLDTAITNTALPTIAASIGADHASVIWVVNAYQLAMVATLLPFA
SLGEIAGHRRVYIAGLALFSASSLACGLAWSLPTLATARALQGVGAAAIMSVNTALVRFSYPARLLGRGVGLNALVVAVS
FTVGPTVASAILSVTTWHWLFLVNVPVGLAAIAMAAGTLPVTQRARHGFDMAAALLCAIFFAFLILGLGTIAHDGMTHTV
IAEWVIAALGGYALLRRQASHPAPMLAVDLFRRPVFSLSALTSVCSFATQGCAFVSLPFFLQIGLGNSQVATGFLMTPWP
AVVAVMAPIAGRLSDRYPAGVLGSVGLLALAIGMASLATLPPAPSSFALVWRMALCGAGFGFFQAPNLKALMGSAPPRRS
GAASGIVATARLLGQTLGAALVALCFHAAGTHGPIVALWTGSGFALMGTVVSCFRLLPYRRQA
>Mature_462_residues
SANHLQSLRVPHQDGLPTNQRIAALIAISLAVAMATLDTAITNTALPTIAASIGADHASVIWVVNAYQLAMVATLLPFAS
LGEIAGHRRVYIAGLALFSASSLACGLAWSLPTLATARALQGVGAAAIMSVNTALVRFSYPARLLGRGVGLNALVVAVSF
TVGPTVASAILSVTTWHWLFLVNVPVGLAAIAMAAGTLPVTQRARHGFDMAAALLCAIFFAFLILGLGTIAHDGMTHTVI
AEWVIAALGGYALLRRQASHPAPMLAVDLFRRPVFSLSALTSVCSFATQGCAFVSLPFFLQIGLGNSQVATGFLMTPWPA
VVAVMAPIAGRLSDRYPAGVLGSVGLLALAIGMASLATLPPAPSSFALVWRMALCGAGFGFFQAPNLKALMGSAPPRRSG
AASGIVATARLLGQTLGAALVALCFHAAGTHGPIVALWTGSGFALMGTVVSCFRLLPYRRQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]

Homologues:

Organism=Escherichia coli, GI87081983, Length=453, Percent_Identity=49.6688741721854, Blast_Score=410, Evalue=1e-115,
Organism=Escherichia coli, GI1790195, Length=299, Percent_Identity=31.438127090301, Blast_Score=130, Evalue=2e-31,
Organism=Escherichia coli, GI1789042, Length=419, Percent_Identity=24.582338902148, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI1788392, Length=304, Percent_Identity=30.5921052631579, Blast_Score=104, Evalue=1e-23,
Organism=Escherichia coli, GI1788710, Length=335, Percent_Identity=25.0746268656716, Blast_Score=98, Evalue=1e-21,
Organism=Saccharomyces cerevisiae, GI6325455, Length=156, Percent_Identity=28.8461538461538, Blast_Score=64, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR001411 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 47670; Mature: 47539

Theoretical pI: Translated: 11.11; Mature: 11.11

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSANHLQSLRVPHQDGLPTNQRIAALIAISLAVAMATLDTAITNTALPTIAASIGADHAS
CCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
VIWVVNAYQLAMVATLLPFASLGEIAGHRRVYIAGLALFSASSLACGLAWSLPTLATARA
EEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHCHHHHHHHHH
LQGVGAAAIMSVNTALVRFSYPARLLGRGVGLNALVVAVSFTVGPTVASAILSVTTWHWL
HHCCCHHHHHHHHHHHEEECCCHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
FLVNVPVGLAAIAMAAGTLPVTQRARHGFDMAAALLCAIFFAFLILGLGTIAHDGMTHTV
HEECCCHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
IAEWVIAALGGYALLRRQASHPAPMLAVDLFRRPVFSLSALTSVCSFATQGCAFVSLPFF
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECHH
LQIGLGNSQVATGFLMTPWPAVVAVMAPIAGRLSDRYPAGVLGSVGLLALAIGMASLATL
EEECCCCCHHHCCEEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCC
PPAPSSFALVWRMALCGAGFGFFQAPNLKALMGSAPPRRSGAASGIVATARLLGQTLGAA
CCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
LVALCFHAAGTHGPIVALWTGSGFALMGTVVSCFRLLPYRRQA
HHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SANHLQSLRVPHQDGLPTNQRIAALIAISLAVAMATLDTAITNTALPTIAASIGADHAS
CCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
VIWVVNAYQLAMVATLLPFASLGEIAGHRRVYIAGLALFSASSLACGLAWSLPTLATARA
EEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHCHHHHHHHHH
LQGVGAAAIMSVNTALVRFSYPARLLGRGVGLNALVVAVSFTVGPTVASAILSVTTWHWL
HHCCCHHHHHHHHHHHEEECCCHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
FLVNVPVGLAAIAMAAGTLPVTQRARHGFDMAAALLCAIFFAFLILGLGTIAHDGMTHTV
HEECCCHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
IAEWVIAALGGYALLRRQASHPAPMLAVDLFRRPVFSLSALTSVCSFATQGCAFVSLPFF
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECHH
LQIGLGNSQVATGFLMTPWPAVVAVMAPIAGRLSDRYPAGVLGSVGLLALAIGMASLATL
EEECCCCCHHHCCEEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCC
PPAPSSFALVWRMALCGAGFGFFQAPNLKALMGSAPPRRSGAASGIVATARLLGQTLGAA
CCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
LVALCFHAAGTHGPIVALWTGSGFALMGTVVSCFRLLPYRRQA
HHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]