| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is asd [H]
Identifier: 238024255
GI number: 238024255
Start: 1015339
End: 1016460
Strand: Direct
Name: asd [H]
Synonym: bglu_2g08380
Alternate gene names: 238024255
Gene position: 1015339-1016460 (Clockwise)
Preceding gene: 238024254
Following gene: 238024256
Centisome position: 35.91
GC content: 66.58
Gene sequence:
>1122_bases ATGAAGGTAGGTCTCGTAGGTTGGCGTGGCATGGTCGGCAGCGTGCTGATGCAGCGCATGCAGGAAGAGGGCGATTTCGA TCTGATCGAGCCGGTGTTTTTCAGCACCAGCAATGCTGGCGGCAAGGCGCCGGCCTATGCGAAAAACGAGACCACGCTGA AGGACGCGGCGAGCATCGACGAGTTGAAGGGCTGCGACGCGATCATCACCTGCCAGGGCGGCGATTACACCAACGAGGTG TTCCCGAAGCTGCGCGAAGCCGGCTGGAAGGGCTACTGGATCGACGCGGCCTCGTCGCTGCGGATGAAGGACGACGCCGT CATCGTTCTCGACCCGGTCAACCTCGACGTGATCAAGGACGCGCTCGTGAAGGGCGCCCGCAACTTCATCGGCGGCAACT GCACCGTGAGCCTGATGCTGATGGCGCTGGGCGGCCTGTTCCGCGAGAACCTGGTGGACTGGATGACGGCCATGACCTAT CAAGCCGCCTCGGGCGCCGGCGCGCAGAACATGCGCGAGCTGATCGCGCAGATGGGCGTGCTGCACGGCGCGGTGGCCGA GCAGCTGGCCGATCCGGCCTCGGCGATCCTCGACATCGACCGCCGCGTGTCGGCCGCCATGAACGGCGCCGACATGCCGA GCAGCCAGTTCGGCGTGCCGCTCGCGGGCTCGCTGATTCCGTGGATCGACAAGGATCTCGGCAACGGCATGTCGAAGGAA GAATGGAAGGGCGGCGCCGAAGCCAACAAGATCCTCGGCAAGCCGGGCATGGGCGAGCCGGGTTCGATCCCCGTCGACGG CCTGTGCGTGCGGGTCGGCGCGATGCGCTGCCACTCGCAGGCGCTCACCATCAAGCTGACCAGGGACGTGCCGCTCGACG AAGTCAACGCGATCATCGCCTCGGGCAACGACTGGGTGAAGGTCGTGCCGAACGAGCGCGAAGCGTCGATCCGCGAACTG TCGACGGCGGTCGTCACGGGCACGCTGTCGGTGCCGGTCGGCCGCCTGCGCAAGCTGGCGATGGGCGGTGAATACCTGTC GGCGTTCACGGTCGGCGACCAGCTGCTGTGGGGCGCGGCCGAGCCGCTGCGCCGGATGCTGCGCATCCTGCTGGACCGAT AA
Upstream 100 bases:
>100_bases ACGAAAAGCTGATCGTCGTCCGTCGTGCCCGCCTGATTTCCCCGCGCGGTTACGCGGGGGGCGGAGAAGGCGGGGAAAAT TCTCAAGCAAAGGTTGAGTC
Downstream 100 bases:
>100_bases GACCGGCGCGGTCCGCGTCCGCAGGGACGACGGCGGCGTTCGCGGTGCCCGGCATCCGGCCGGGGGCGGCGAACGCCGCT TCGTTTGGGGCGTGCGCCGC
Product: aspartate-semialdehyde dehydrogenase
Products: NA
Alternate protein names: ASA dehydrogenase; ASADH [H]
Number of amino acids: Translated: 373; Mature: 373
Protein sequence:
>373_residues MKVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTSNAGGKAPAYAKNETTLKDAASIDELKGCDAIITCQGGDYTNEV FPKLREAGWKGYWIDAASSLRMKDDAVIVLDPVNLDVIKDALVKGARNFIGGNCTVSLMLMALGGLFRENLVDWMTAMTY QAASGAGAQNMRELIAQMGVLHGAVAEQLADPASAILDIDRRVSAAMNGADMPSSQFGVPLAGSLIPWIDKDLGNGMSKE EWKGGAEANKILGKPGMGEPGSIPVDGLCVRVGAMRCHSQALTIKLTRDVPLDEVNAIIASGNDWVKVVPNEREASIREL STAVVTGTLSVPVGRLRKLAMGGEYLSAFTVGDQLLWGAAEPLRRMLRILLDR
Sequences:
>Translated_373_residues MKVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTSNAGGKAPAYAKNETTLKDAASIDELKGCDAIITCQGGDYTNEV FPKLREAGWKGYWIDAASSLRMKDDAVIVLDPVNLDVIKDALVKGARNFIGGNCTVSLMLMALGGLFRENLVDWMTAMTY QAASGAGAQNMRELIAQMGVLHGAVAEQLADPASAILDIDRRVSAAMNGADMPSSQFGVPLAGSLIPWIDKDLGNGMSKE EWKGGAEANKILGKPGMGEPGSIPVDGLCVRVGAMRCHSQALTIKLTRDVPLDEVNAIIASGNDWVKVVPNEREASIREL STAVVTGTLSVPVGRLRKLAMGGEYLSAFTVGDQLLWGAAEPLRRMLRILLDR >Mature_373_residues MKVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTSNAGGKAPAYAKNETTLKDAASIDELKGCDAIITCQGGDYTNEV FPKLREAGWKGYWIDAASSLRMKDDAVIVLDPVNLDVIKDALVKGARNFIGGNCTVSLMLMALGGLFRENLVDWMTAMTY QAASGAGAQNMRELIAQMGVLHGAVAEQLADPASAILDIDRRVSAAMNGADMPSSQFGVPLAGSLIPWIDKDLGNGMSKE EWKGGAEANKILGKPGMGEPGSIPVDGLCVRVGAMRCHSQALTIKLTRDVPLDEVNAIIASGNDWVKVVPNEREASIREL STAVVTGTLSVPVGRLRKLAMGGEYLSAFTVGDQLLWGAAEPLRRMLRILLDR
Specific function: Second step in the common biosynthetic pathway leading from Asp to the cell wall precursor meso-diaminopimelate, to Lys, to Met, to Ile and to Thr. [C]
COG id: COG0136
COG function: function code E; Aspartate-semialdehyde dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartate-semialdehyde dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1789841, Length=369, Percent_Identity=67.2086720867209, Blast_Score=518, Evalue=1e-148,
Paralogues:
None
Copy number: 900 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000319 - InterPro: IPR011534 - InterPro: IPR012080 - InterPro: IPR016040 - InterPro: IPR000534 - InterPro: IPR012280 [H]
Pfam domain/function: PF01118 Semialdhyde_dh; PF02774 Semialdhyde_dhC [H]
EC number: =1.2.1.11 [H]
Molecular weight: Translated: 39914; Mature: 39914
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: PS01103 ASD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTSNAGGKAPAYAKNETTLKDAASID CCEECCCHHHHHHHHHHHHHHHCCCCCCCCHHHEECCCCCCCCCCCCCCCCCHHHHHHHH ELKGCDAIITCQGGDYTNEVFPKLREAGWKGYWIDAASSLRMKDDAVIVLDPVNLDVIKD HHCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCEECCCCEEEEECCCHHHHHH ALVKGARNFIGGNCTVSLMLMALGGLFRENLVDWMTAMTYQAASGAGAQNMRELIAQMGV HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH LHGAVAEQLADPASAILDIDRRVSAAMNGADMPSSQFGVPLAGSLIPWIDKDLGNGMSKE HHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHH EWKGGAEANKILGKPGMGEPGSIPVDGLCVRVGAMRCHSQALTIKLTRDVPLDEVNAIIA HHCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCHHHHHEEEE SGNDWVKVVPNEREASIRELSTAVVTGTLSVPVGRLRKLAMGGEYLSAFTVGDQLLWGAA CCCCEEEECCCCHHHHHHHHHHHHHEEEHHCCHHHHHHHHCCCHHHHHHHHHHHHHHCCH EPLRRMLRILLDR HHHHHHHHHHHCC >Mature Secondary Structure MKVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTSNAGGKAPAYAKNETTLKDAASID CCEECCCHHHHHHHHHHHHHHHCCCCCCCCHHHEECCCCCCCCCCCCCCCCCHHHHHHHH ELKGCDAIITCQGGDYTNEVFPKLREAGWKGYWIDAASSLRMKDDAVIVLDPVNLDVIKD HHCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCEECCCCEEEEECCCHHHHHH ALVKGARNFIGGNCTVSLMLMALGGLFRENLVDWMTAMTYQAASGAGAQNMRELIAQMGV HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH LHGAVAEQLADPASAILDIDRRVSAAMNGADMPSSQFGVPLAGSLIPWIDKDLGNGMSKE HHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHH EWKGGAEANKILGKPGMGEPGSIPVDGLCVRVGAMRCHSQALTIKLTRDVPLDEVNAIIA HHCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCHHHHHEEEE SGNDWVKVVPNEREASIRELSTAVVTGTLSVPVGRLRKLAMGGEYLSAFTVGDQLLWGAA CCCCEEEECCCCHHHHHHHHHHHHHEEEHHCCHHHHHHHHCCCHHHHHHHHHHHHHHCCH EPLRRMLRILLDR HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9084174; 10984043 [H]