| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
Click here to switch to the map view.
The map label for this gene is menE [H]
Identifier: 238024214
GI number: 238024214
Start: 955873
End: 957339
Strand: Direct
Name: menE [H]
Synonym: bglu_2g07940
Alternate gene names: 238024214
Gene position: 955873-957339 (Clockwise)
Preceding gene: 238024213
Following gene: 238024215
Centisome position: 33.81
GC content: 68.3
Gene sequence:
>1467_bases ATGAAGTTCACTTCGCTGCTGGCCCGGGAGGCGAACTGGCATCTCGTCGTGAACGGGACGCGCCTGAGGGCGGAAGACCT GCGCGCACGGCTGAGGGCCGCGCGCCGCGCGCTGGGCCCGCTGGAGCCGCACCTGCTCGGGCGCGGCTGTTTGATCGCGG TCGGCTTCTCGGGGTTCGACTACTTCCTGTTCACGCTGCTCGCCTCGGCACTCGGCTGCCGGGTCGTCCTGTGCGACCCG AAGATGCTGTCCGCCGCGCTGCGCCAGTACCGGCTGGATGCGCTCGCGGTGGTCGCGCCCCGGTCGATCGCGTGCCACGG GCTGCCGGTCGTCGTGCTCGACCCTGCGCTGGCCGAAGCGGAAGCGCCGGGGGACGACGGGTTCGCGTGGCCGCGCGCCG ACGTGCCACGCGCGCAGATCGTCTTCATGACGTCGGGCACCACGAGTGCGCCGAAGCTGGTCGTCTACGACGAAGCGCAG CTCGTCGAGAATGCGCTGGCGGTAGGCCGCTATCTGGAGGTGCGGCCCGGCGACGGCGTGCTCTGCATGTTCCCCACCCA CTACATGTACGGCTTCTCGACGATCATGAGCGGCCTGCTGGCCGGCGCGACCGTCTGGCTCGAACGGGCGTCGCTGACCG CGCACGAGGTGCTCGGCTACCTGGGCGGCGGCCGGATCCGCTTCGTGCCTTTGATCCGCAGCATTGCCGAGCGCGTGTGT GATCTGGCCGAGGCGACGCCGGGCATGAGGTTCGACGGAATCGTCGTGCTCAACGCATCCGATCGCATCTATGCGGCACA GGTGCGCCGCCTGCTCGCGCTCGGCGCCTGCCTGTGGAACAACTTCGGCCAGACCGAGTCGGGGCCGCGGATCTTCGCGC TGCCGCTCACGCCAGCCGATCTGCCGCATGTCGCGTCGTACTGCTTCGAGGGAGTGCTCGCGCCGGGCCGCCCGATCGAC CCGAGCATCTGCCTGTCGATCGTCGATGCGCAGGGCCGGCCGTGCGCACCCGGCGAACCCGGTCATCTGCTTTACCGCAC GCCTTACGCGATGCAAGGCTATCTGCAGCCGGACGGCAGCCTGCGGCAGTTCACGCCGCTGGAATCCGGCGATCTCGTGT TCCGACGCGACGACGGCGTCGTGTTCTGGGTCGGCCGGCGCGACGAGACGGTCAAGTGCAACGGCCGGCTAATCAACGTC AGCCTGCTGCACCAGCATTTCGATGCGTTCGACGACATCGCGAAAAGCTATTTCCTCGCCGATCCGCAGACCGGCGCGCT GACGGTGTTCGTCGTGCCGGGCCGGGTGCCGGCTGGTACCGAAGTGGATTTCAAGTCGCGCATCCTGAGCCGCTACCGGG CCGCGTTCCCGCTGTATCCGCGCATCGCCGACGTGCTGTTTGTCGACGATCTTCCGGTCACCAGCACCGGAAAGATCTCA TTGCGTCTGTTGCGCGAAAGCGCGTGA
Upstream 100 bases:
>100_bases TCGTCCGCGCGCCGATGCCCAGCCATGCGCGGCGCGTGCTCAAGAACTCGTTCGGCATGGGCGGTCTCGCGGCTTCGCTC GTGCTGGAAGGAGCGGCCGC
Downstream 100 bases:
>100_bases CCGAAGCCCGAACCTGGAGCCTATGATGTCCGACCGCACGACTCGCTTCGATGCATCCACCGTGAGCGAAGCGCTTTCGT ACGATGCCCGCTACGCGCAT
Product: AMP-dependent synthetase and ligase
Products: NA
Alternate protein names: OSB-CoA synthetase; o-succinylbenzoyl-CoA synthetase [H]
Number of amino acids: Translated: 488; Mature: 488
Protein sequence:
>488_residues MKFTSLLAREANWHLVVNGTRLRAEDLRARLRAARRALGPLEPHLLGRGCLIAVGFSGFDYFLFTLLASALGCRVVLCDP KMLSAALRQYRLDALAVVAPRSIACHGLPVVVLDPALAEAEAPGDDGFAWPRADVPRAQIVFMTSGTTSAPKLVVYDEAQ LVENALAVGRYLEVRPGDGVLCMFPTHYMYGFSTIMSGLLAGATVWLERASLTAHEVLGYLGGGRIRFVPLIRSIAERVC DLAEATPGMRFDGIVVLNASDRIYAAQVRRLLALGACLWNNFGQTESGPRIFALPLTPADLPHVASYCFEGVLAPGRPID PSICLSIVDAQGRPCAPGEPGHLLYRTPYAMQGYLQPDGSLRQFTPLESGDLVFRRDDGVVFWVGRRDETVKCNGRLINV SLLHQHFDAFDDIAKSYFLADPQTGALTVFVVPGRVPAGTEVDFKSRILSRYRAAFPLYPRIADVLFVDDLPVTSTGKIS LRLLRESA
Sequences:
>Translated_488_residues MKFTSLLAREANWHLVVNGTRLRAEDLRARLRAARRALGPLEPHLLGRGCLIAVGFSGFDYFLFTLLASALGCRVVLCDP KMLSAALRQYRLDALAVVAPRSIACHGLPVVVLDPALAEAEAPGDDGFAWPRADVPRAQIVFMTSGTTSAPKLVVYDEAQ LVENALAVGRYLEVRPGDGVLCMFPTHYMYGFSTIMSGLLAGATVWLERASLTAHEVLGYLGGGRIRFVPLIRSIAERVC DLAEATPGMRFDGIVVLNASDRIYAAQVRRLLALGACLWNNFGQTESGPRIFALPLTPADLPHVASYCFEGVLAPGRPID PSICLSIVDAQGRPCAPGEPGHLLYRTPYAMQGYLQPDGSLRQFTPLESGDLVFRRDDGVVFWVGRRDETVKCNGRLINV SLLHQHFDAFDDIAKSYFLADPQTGALTVFVVPGRVPAGTEVDFKSRILSRYRAAFPLYPRIADVLFVDDLPVTSTGKIS LRLLRESA >Mature_488_residues MKFTSLLAREANWHLVVNGTRLRAEDLRARLRAARRALGPLEPHLLGRGCLIAVGFSGFDYFLFTLLASALGCRVVLCDP KMLSAALRQYRLDALAVVAPRSIACHGLPVVVLDPALAEAEAPGDDGFAWPRADVPRAQIVFMTSGTTSAPKLVVYDEAQ LVENALAVGRYLEVRPGDGVLCMFPTHYMYGFSTIMSGLLAGATVWLERASLTAHEVLGYLGGGRIRFVPLIRSIAERVC DLAEATPGMRFDGIVVLNASDRIYAAQVRRLLALGACLWNNFGQTESGPRIFALPLTPADLPHVASYCFEGVLAPGRPID PSICLSIVDAQGRPCAPGEPGHLLYRTPYAMQGYLQPDGSLRQFTPLESGDLVFRRDDGVVFWVGRRDETVKCNGRLINV SLLHQHFDAFDDIAKSYFLADPQTGALTVFVVPGRVPAGTEVDFKSRILSRYRAAFPLYPRIADVLFVDDLPVTSTGKIS LRLLRESA
Specific function: Converts 2-succinylbenzoate (OSB) to 2-succinylbenzoyl- CoA (OSB-CoA) [H]
COG id: COG0318
COG function: function code IQ; Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
Gene ontology:
Cell location: Partially Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000873 - InterPro: IPR010192 - InterPro: IPR023015 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.26 [H]
Molecular weight: Translated: 53270; Mature: 53270
Theoretical pI: Translated: 7.88; Mature: 7.88
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFTSLLAREANWHLVVNGTRLRAEDLRARLRAARRALGPLEPHLLGRGCLIAVGFSGFD CCHHHHHHCCCCEEEEEECCEECHHHHHHHHHHHHHHCCCCCHHHCCCCEEEEEECCCHH YFLFTLLASALGCRVVLCDPKMLSAALRQYRLDALAVVAPRSIACHGLPVVVLDPALAEA HHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHEEEECCCCEEECCCCEEEECCCHHHC EAPGDDGFAWPRADVPRAQIVFMTSGTTSAPKLVVYDEAQLVENALAVGRYLEVRPGDGV CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEECHHHHHHHHHHHCCEEEECCCCCE LCMFPTHYMYGFSTIMSGLLAGATVWLERASLTAHEVLGYLGGGRIRFVPLIRSIAERVC EEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEHHHHHHHHHHHH DLAEATPGMRFDGIVVLNASDRIYAAQVRRLLALGACLWNNFGQTESGPRIFALPLTPAD HHHHCCCCCEECCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCC LPHVASYCFEGVLAPGRPIDPSICLSIVDAQGRPCAPGEPGHLLYRTPYAMQGYLQPDGS HHHHHHHHHHCCCCCCCCCCHHHEEEEEECCCCCCCCCCCCEEEEECCHHHCCEECCCCC LRQFTPLESGDLVFRRDDGVVFWVGRRDETVKCNGRLINVSLLHQHFDAFDDIAKSYFLA CCEECCCCCCCEEEEECCCEEEEECCCCCEEEECCEEEEHHHHHHHHHHHHHHHHHHEEC DPQTGALTVFVVPGRVPAGTEVDFKSRILSRYRAAFPLYPRIADVLFVDDLPVTSTGKIS CCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHEEEECCCCCCCCCCEE LRLLRESA EEEEECCC >Mature Secondary Structure MKFTSLLAREANWHLVVNGTRLRAEDLRARLRAARRALGPLEPHLLGRGCLIAVGFSGFD CCHHHHHHCCCCEEEEEECCEECHHHHHHHHHHHHHHCCCCCHHHCCCCEEEEEECCCHH YFLFTLLASALGCRVVLCDPKMLSAALRQYRLDALAVVAPRSIACHGLPVVVLDPALAEA HHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHEEEECCCCEEECCCCEEEECCCHHHC EAPGDDGFAWPRADVPRAQIVFMTSGTTSAPKLVVYDEAQLVENALAVGRYLEVRPGDGV CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEECHHHHHHHHHHHCCEEEECCCCCE LCMFPTHYMYGFSTIMSGLLAGATVWLERASLTAHEVLGYLGGGRIRFVPLIRSIAERVC EEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEHHHHHHHHHHHH DLAEATPGMRFDGIVVLNASDRIYAAQVRRLLALGACLWNNFGQTESGPRIFALPLTPAD HHHHCCCCCEECCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCC LPHVASYCFEGVLAPGRPIDPSICLSIVDAQGRPCAPGEPGHLLYRTPYAMQGYLQPDGS HHHHHHHHHHCCCCCCCCCCHHHEEEEEECCCCCCCCCCCCEEEEECCHHHCCEECCCCC LRQFTPLESGDLVFRRDDGVVFWVGRRDETVKCNGRLINVSLLHQHFDAFDDIAKSYFLA CCEECCCCCCCEEEEECCCEEEEECCCCCEEEECCEEEEHHHHHHHHHHHHHHHHHHEEC DPQTGALTVFVVPGRVPAGTEVDFKSRILSRYRAAFPLYPRIADVLFVDDLPVTSTGKIS CCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHEEEECCCCCCCCCCEE LRLLRESA EEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11337471 [H]