| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024164
Identifier: 238024164
GI number: 238024164
Start: 888978
End: 891614
Strand: Reverse
Name: 238024164
Synonym: bglu_2g07420
Alternate gene names: NA
Gene position: 891614-888978 (Counterclockwise)
Preceding gene: 238024165
Following gene: 238024163
Centisome position: 31.54
GC content: 75.05
Gene sequence:
>2637_bases ATGAAAATCATCAAACCCCAATCGCTCGGCCTGCTGCAGAAGCCCTACACCCACCTCGGCCGGCATCGGCTGTCGGTGGC CGTGATCGGCTTCTTCCCGCTCGGCCGGACCAGCGAGCGCTTCCTCGCCGAGAACCAGCAATGGCCGCACGTGCTGGCGA GCCTGCCGGCCGGCCAGCCGCTCGACGAGGCGATGCCGCGCCAGGGCGCCGAGGTGCTGCTGCTCGGCTCGGCCTACGCG CCGCAGCGCAAGGCCGCCACCAGCGTGGACGTGCAGCTGCGGCTCGACGACCGCGCCGGCCAGCCGCTCGTCAGCAAGTG CCTGTGCGTGTGCGGCGAGCGCGAATGGCGCGCGCCGGCGCTGGGCGGGCGCCGCGTCGGCCAGCCCAAGCCGTTCCTCG CGATGCCGCTCAGCTATGCGCGCGCGTTCGGCGGCGCGCGCCACGCGGCCAACCCGGCCGGCTGCGGCAGCCGTGCGTCG TGGTTCGGCAAGGGCCGCGGCGCGATGCCGAACGTCGCCTACCCGCCCAACGCGGCGGATCCCGCCTGGCGCGCCAGCGT GCCGGCCGGCTTCGGGCCGATCCCGATCGGCAACCGCGCGCGGCTGCGCAAGTTCGGCAGCTACGGCAGCCAGTGGCTCA AGCACGACGCGCCCGGCTTCGCGCGCGACCTCGACTGGAGCGTGTTCAACATGGCGCCGCCCGACCAGTGGACGAAGGCG CCGTTCCAGGGCGGCGAGCGCTACACGCTGCGGCATCTGCATCCGCAGCACGCCGAGCTGTCCGGCACCCTGCCCGGGCT GGCCGCGCGCGGCTTCGTGCTGCGCGCCGGCGAGGCGCCCGAGCAGGCCCGCGAGGTGCCGCTCGCGATGGATGCCGTCT GGTTCGTGCCCGACTACGACCTCGGCGTCGCGGTCTATCACGGCACGCTCGAGATCGGCGACGGCGACGGGCTCGACGTC GACACGCTGATGGTCGGCTACGAACACCGCGACCGCCCGAAGCCCCTGGCGCACTACCACGACGTGCTGCGGCTGCGCCT CGACCCCGAGGCGGCCCGCCTGCACGCGTTCAACGACAGCCAGCTCGCGCCGCAGCGTTCCGAGGCCGAGCAGGCGCGCC GCGCCCGCGAGCAGCAAGCGGCCGAGCAGGCCGTGCTGGCGCGCGACCAGCGCCGCCTCGACCTGCTCGACCAGCAATAC TGGGCGCGCCGCGGCAAGGCCCGGCCGGCCGGCCATCAGGTCGCGCAAGCCCGGCTGCCGGCGCTCGGCCTGATGACCTC GCAGACGGCGGCCGAGGGCGACTTCGATCTGTCGGAGATCGTGCTGAAGGCCAAGGCGCTGGCGGCCGACGCCGAGCAGC GCGGCCTGGCGGCGCTCGCCAAGCTGCCGGCCCGGCCGGCGGCGGCGGTGGACGCGGCCAAGCTGCTGGCCGACGCGCTC GAACGCGCGGCGCGGCCGGCCTACGACCTGCTCGCGCCGGAGCAGGCCGGGCGCGATCCGCAGGTCGCCAGCATGCTGGC CAAGCTCGCCGCGCCGGCCGCCGACGCCGGCCCGAAGCAGCACGAGCGCCACCAGCACGCGCGCGACGCGGTCCTGAAGA TTCCGGCGCTGCGGCGCCAGGCGCGCCGCTCGGCGCCGAAGCCGACGCTCGCCGCGCTGCCCTATCCGGCCGACGTCGCG CGCCGCCTCGGCGAGCAGATCCGCCAATGGCACGCGGCGGGCGTGGTGCTGGCCGGGCGCGACCTGGCCGGCGCCGATCT GGCCGGCCTCGATTTCTCGGGCGCCGACCTGCGCGAGGCGATGCTCGACGGCGCCGACCTCAGCGGGGCGAAATTCGTCG GCGCCAAGCTGCAGGGCGCCGTGCTGGTGGGCGCGCGCCTGGACCACGCCGATTTTTCGGGCGCCGACCTCACGCGCGCC AACCTCTGCATGAGCAGCGGCCGCGCCATCTCGTTCGACGGCGCCGAGCTGGGCCACGCCCAGGCGATCGACGCGCAGTG GCCGCAGGCCAGCCTGCGCGGCGCCCGGCTGGGCCGCCTGCTCGGGCTGCGGCTCGCCTGCCCCGGCGCCGTGTTCGACG AGGCCGACGCGAGCAAGGCAACGCTGTTCGACCTCGCGGCCGAGGACAGCCGCTGGCATGCCGCGCGGCTCGAGAAGACG GTGTTCATGCGCGCGCGGCTGACGCGCGCCGGCTTCGCGGGCGCGCGGCTGACCAAGACCGTGTTCACCATGAGCGACCT GCAGGCGAGCCGCTGGGAAGGCGCGCGGCTCGACGGCGTGCAGGGCGGCACCCGGAGCATCTGGCGCGACGCCGTGATGA GCGGCGTGACGGCGCGCAACAGCGGCTTCGCCGGCGCCGACCTCTCGCACGCCGATCTGGAGGCGGCCAGCTTCCTGCGC TGCGACTTCGGCCAGGCCGAGCTGCGCGGCGCCCGGCTGGTGGCCGGCCTGTTCTCGCACTGCGGCTTCTATGCGAGCCG GCTGCGCATGGTCGAGGCAAGCGGCGCCGAGTTCTACCAATGCACCTGCCGCAAGACCGATTTCACCGGCGCGCGGCTGG TGGACGCCGTGTTCGCGCAGTGCGAGCAGACCGGCGCGATCCCGCCGCAAGGCGTCACCACCGGGAGCCCCGCATGA
Upstream 100 bases:
>100_bases CGGCGCGCGCGTGTCGAACAACGACGAAACCCCGCACATCGACAACATCGTCACGCGGATCTACATGATCGAAGCCATGA TCATCTTCATGTGAGCCGCG
Downstream 100 bases:
>100_bases GCACGATCTGGGACGACATCGCGCTGGCGATCCAGCTCGACCAGCCGATCAGGCAGCGCGAGCTGGCCGGGCTCGACGCG CGCCGCCGCGAGCTGGGCGG
Product: pentapeptide repeat-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 878; Mature: 878
Protein sequence:
>878_residues MKIIKPQSLGLLQKPYTHLGRHRLSVAVIGFFPLGRTSERFLAENQQWPHVLASLPAGQPLDEAMPRQGAEVLLLGSAYA PQRKAATSVDVQLRLDDRAGQPLVSKCLCVCGEREWRAPALGGRRVGQPKPFLAMPLSYARAFGGARHAANPAGCGSRAS WFGKGRGAMPNVAYPPNAADPAWRASVPAGFGPIPIGNRARLRKFGSYGSQWLKHDAPGFARDLDWSVFNMAPPDQWTKA PFQGGERYTLRHLHPQHAELSGTLPGLAARGFVLRAGEAPEQAREVPLAMDAVWFVPDYDLGVAVYHGTLEIGDGDGLDV DTLMVGYEHRDRPKPLAHYHDVLRLRLDPEAARLHAFNDSQLAPQRSEAEQARRAREQQAAEQAVLARDQRRLDLLDQQY WARRGKARPAGHQVAQARLPALGLMTSQTAAEGDFDLSEIVLKAKALAADAEQRGLAALAKLPARPAAAVDAAKLLADAL ERAARPAYDLLAPEQAGRDPQVASMLAKLAAPAADAGPKQHERHQHARDAVLKIPALRRQARRSAPKPTLAALPYPADVA RRLGEQIRQWHAAGVVLAGRDLAGADLAGLDFSGADLREAMLDGADLSGAKFVGAKLQGAVLVGARLDHADFSGADLTRA NLCMSSGRAISFDGAELGHAQAIDAQWPQASLRGARLGRLLGLRLACPGAVFDEADASKATLFDLAAEDSRWHAARLEKT VFMRARLTRAGFAGARLTKTVFTMSDLQASRWEGARLDGVQGGTRSIWRDAVMSGVTARNSGFAGADLSHADLEAASFLR CDFGQAELRGARLVAGLFSHCGFYASRLRMVEASGAEFYQCTCRKTDFTGARLVDAVFAQCEQTGAIPPQGVTTGSPA
Sequences:
>Translated_878_residues MKIIKPQSLGLLQKPYTHLGRHRLSVAVIGFFPLGRTSERFLAENQQWPHVLASLPAGQPLDEAMPRQGAEVLLLGSAYA PQRKAATSVDVQLRLDDRAGQPLVSKCLCVCGEREWRAPALGGRRVGQPKPFLAMPLSYARAFGGARHAANPAGCGSRAS WFGKGRGAMPNVAYPPNAADPAWRASVPAGFGPIPIGNRARLRKFGSYGSQWLKHDAPGFARDLDWSVFNMAPPDQWTKA PFQGGERYTLRHLHPQHAELSGTLPGLAARGFVLRAGEAPEQAREVPLAMDAVWFVPDYDLGVAVYHGTLEIGDGDGLDV DTLMVGYEHRDRPKPLAHYHDVLRLRLDPEAARLHAFNDSQLAPQRSEAEQARRAREQQAAEQAVLARDQRRLDLLDQQY WARRGKARPAGHQVAQARLPALGLMTSQTAAEGDFDLSEIVLKAKALAADAEQRGLAALAKLPARPAAAVDAAKLLADAL ERAARPAYDLLAPEQAGRDPQVASMLAKLAAPAADAGPKQHERHQHARDAVLKIPALRRQARRSAPKPTLAALPYPADVA RRLGEQIRQWHAAGVVLAGRDLAGADLAGLDFSGADLREAMLDGADLSGAKFVGAKLQGAVLVGARLDHADFSGADLTRA NLCMSSGRAISFDGAELGHAQAIDAQWPQASLRGARLGRLLGLRLACPGAVFDEADASKATLFDLAAEDSRWHAARLEKT VFMRARLTRAGFAGARLTKTVFTMSDLQASRWEGARLDGVQGGTRSIWRDAVMSGVTARNSGFAGADLSHADLEAASFLR CDFGQAELRGARLVAGLFSHCGFYASRLRMVEASGAEFYQCTCRKTDFTGARLVDAVFAQCEQTGAIPPQGVTTGSPA >Mature_878_residues MKIIKPQSLGLLQKPYTHLGRHRLSVAVIGFFPLGRTSERFLAENQQWPHVLASLPAGQPLDEAMPRQGAEVLLLGSAYA PQRKAATSVDVQLRLDDRAGQPLVSKCLCVCGEREWRAPALGGRRVGQPKPFLAMPLSYARAFGGARHAANPAGCGSRAS WFGKGRGAMPNVAYPPNAADPAWRASVPAGFGPIPIGNRARLRKFGSYGSQWLKHDAPGFARDLDWSVFNMAPPDQWTKA PFQGGERYTLRHLHPQHAELSGTLPGLAARGFVLRAGEAPEQAREVPLAMDAVWFVPDYDLGVAVYHGTLEIGDGDGLDV DTLMVGYEHRDRPKPLAHYHDVLRLRLDPEAARLHAFNDSQLAPQRSEAEQARRAREQQAAEQAVLARDQRRLDLLDQQY WARRGKARPAGHQVAQARLPALGLMTSQTAAEGDFDLSEIVLKAKALAADAEQRGLAALAKLPARPAAAVDAAKLLADAL ERAARPAYDLLAPEQAGRDPQVASMLAKLAAPAADAGPKQHERHQHARDAVLKIPALRRQARRSAPKPTLAALPYPADVA RRLGEQIRQWHAAGVVLAGRDLAGADLAGLDFSGADLREAMLDGADLSGAKFVGAKLQGAVLVGARLDHADFSGADLTRA NLCMSSGRAISFDGAELGHAQAIDAQWPQASLRGARLGRLLGLRLACPGAVFDEADASKATLFDLAAEDSRWHAARLEKT VFMRARLTRAGFAGARLTKTVFTMSDLQASRWEGARLDGVQGGTRSIWRDAVMSGVTARNSGFAGADLSHADLEAASFLR CDFGQAELRGARLVAGLFSHCGFYASRLRMVEASGAEFYQCTCRKTDFTGARLVDAVFAQCEQTGAIPPQGVTTGSPA
Specific function: Unknown
COG id: COG1357
COG function: function code S; Uncharacterized low-complexity proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 5 pentapeptide repeat domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001646 [H]
Pfam domain/function: PF00805 Pentapeptide [H]
EC number: NA
Molecular weight: Translated: 94370; Mature: 94370
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIIKPQSLGLLQKPYTHLGRHRLSVAVIGFFPLGRTSERFLAENQQWPHVLASLPAGQP CCCCCCCCCCHHHHHHHHHHHHHEEEEEEEEECCCCCHHHHHHCCCCCCHHHHHCCCCCC LDEAMPRQGAEVLLLGSAYAPQRKAATSVDVQLRLDDRAGQPLVSKCLCVCGEREWRAPA HHHHHCCCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCC LGGRRVGQPKPFLAMPLSYARAFGGARHAANPAGCGSRASWFGKGRGAMPNVAYPPNAAD CCCCCCCCCCCHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PAWRASVPAGFGPIPIGNRARLRKFGSYGSQWLKHDAPGFARDLDWSVFNMAPPDQWTKA CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHCCCCCEECCCCCCHHCCC PFQGGERYTLRHLHPQHAELSGTLPGLAARGFVLRAGEAPEQAREVPLAMDAVWFVPDYD CCCCCCEEEEECCCCCCHHCCCCCCCHHHCCEEEECCCCHHHHHCCCEEEEEEEECCCCC LGVAVYHGTLEIGDGDGLDVDTLMVGYEHRDRPKPLAHYHDVLRLRLDPEAARLHAFNDS CCEEEEEEEEEECCCCCCCHHHEEECCCCCCCCCHHHHHHHHHHEEECCCHHHEEECCCC QLAPQRSEAEQARRAREQQAAEQAVLARDQRRLDLLDQQYWARRGKARPAGHQVAQARLP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC ALGLMTSQTAAEGDFDLSEIVLKAKALAADAEQRGLAALAKLPARPAAAVDAAKLLADAL HHHEEECCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH ERAARPAYDLLAPEQAGRDPQVASMLAKLAAPAADAGPKQHERHQHARDAVLKIPALRRQ HHHCCCHHHHCCCHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCHHHHHH ARRSAPKPTLAALPYPADVARRLGEQIRQWHAAGVVLAGRDLAGADLAGLDFSGADLREA HHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCHHHHHH MLDGADLSGAKFVGAKLQGAVLVGARLDHADFSGADLTRANLCMSSGRAISFDGAELGHA HHCCCCCCCCEEECCCCCCEEEEEEEECCCCCCCCCCHHHHHHHCCCCEEEECCCCCCCC QAIDAQWPQASLRGARLGRLLGLRLACPGAVFDEADASKATLFDLAAEDSRWHAARLEKT CCCCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHH VFMRARLTRAGFAGARLTKTVFTMSDLQASRWEGARLDGVQGGTRSIWRDAVMSGVTARN HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC SGFAGADLSHADLEAASFLRCDFGQAELRGARLVAGLFSHCGFYASRLRMVEASGAEFYQ CCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE CTCRKTDFTGARLVDAVFAQCEQTGAIPPQGVTTGSPA EEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MKIIKPQSLGLLQKPYTHLGRHRLSVAVIGFFPLGRTSERFLAENQQWPHVLASLPAGQP CCCCCCCCCCHHHHHHHHHHHHHEEEEEEEEECCCCCHHHHHHCCCCCCHHHHHCCCCCC LDEAMPRQGAEVLLLGSAYAPQRKAATSVDVQLRLDDRAGQPLVSKCLCVCGEREWRAPA HHHHHCCCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCC LGGRRVGQPKPFLAMPLSYARAFGGARHAANPAGCGSRASWFGKGRGAMPNVAYPPNAAD CCCCCCCCCCCHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PAWRASVPAGFGPIPIGNRARLRKFGSYGSQWLKHDAPGFARDLDWSVFNMAPPDQWTKA CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHCCCCCEECCCCCCHHCCC PFQGGERYTLRHLHPQHAELSGTLPGLAARGFVLRAGEAPEQAREVPLAMDAVWFVPDYD CCCCCCEEEEECCCCCCHHCCCCCCCHHHCCEEEECCCCHHHHHCCCEEEEEEEECCCCC LGVAVYHGTLEIGDGDGLDVDTLMVGYEHRDRPKPLAHYHDVLRLRLDPEAARLHAFNDS CCEEEEEEEEEECCCCCCCHHHEEECCCCCCCCCHHHHHHHHHHEEECCCHHHEEECCCC QLAPQRSEAEQARRAREQQAAEQAVLARDQRRLDLLDQQYWARRGKARPAGHQVAQARLP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC ALGLMTSQTAAEGDFDLSEIVLKAKALAADAEQRGLAALAKLPARPAAAVDAAKLLADAL HHHEEECCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH ERAARPAYDLLAPEQAGRDPQVASMLAKLAAPAADAGPKQHERHQHARDAVLKIPALRRQ HHHCCCHHHHCCCHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCHHHHHH ARRSAPKPTLAALPYPADVARRLGEQIRQWHAAGVVLAGRDLAGADLAGLDFSGADLREA HHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCHHHHHH MLDGADLSGAKFVGAKLQGAVLVGARLDHADFSGADLTRANLCMSSGRAISFDGAELGHA HHCCCCCCCCEEECCCCCCEEEEEEEECCCCCCCCCCHHHHHHHCCCCEEEECCCCCCCC QAIDAQWPQASLRGARLGRLLGLRLACPGAVFDEADASKATLFDLAAEDSRWHAARLEKT CCCCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHH VFMRARLTRAGFAGARLTKTVFTMSDLQASRWEGARLDGVQGGTRSIWRDAVMSGVTARN HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC SGFAGADLSHADLEAASFLRCDFGQAELRGARLVAGLFSHCGFYASRLRMVEASGAEFYQ CCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE CTCRKTDFTGARLVDAVFAQCEQTGAIPPQGVTTGSPA EEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA