Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is 238024165

Identifier: 238024165

GI number: 238024165

Start: 891621

End: 894263

Strand: Reverse

Name: 238024165

Synonym: bglu_2g07430

Alternate gene names: NA

Gene position: 894263-891621 (Counterclockwise)

Preceding gene: 238024166

Following gene: 238024164

Centisome position: 31.63

GC content: 67.92

Gene sequence:

>2643_bases
ATGAGCGACCTGGCGAGCGCCGACGCGCGCAGCTTCTCCGTCAACCGGCTCGCGCCGCCCGAGCCGGCCGTCTACCTGCA
CTGCGCGGTGTTCATCGACCGCCACACCGTGCTCGGCGCCGAGACCTTCCGCCTGCAGAGCTTCCAGGGGCAGGAGAGCG
TGTCGGAGCCGTTCGAATACCAGCTGGAGCTGGTGGCCAACTCCGACGGCGAGCGCGCGCTGCCGGTGCGCTTCGACGAG
CTGATCGGCCGCGCCATCACGGTCGGCATCGGCAAGCAGATCGATCCCGACTGGAGCACCAGCCTGTTCCGCGCCGCGCT
CGAGGGCGGCGTCGCGCCGGACGACACGCGGCTGTCGCTGTTCAACGGCATCGTGACGAGCTTCGCGGTGAAGAACCGCG
GCACCTACGCCATCACGATGAAGCCGGCGCTGCACCGGCTCGGCCTGACCAACAACTACCGCGTGTTCCATGGCCGCACC
GTCTGGGAAATGATCGAGCTGCTGCTCGACGCGCACCACGTCGCCTACGCGCCGTTCCAGCACAGCCAGCGCAACCTCGC
CGTGATCCGCCGCCAGGACTGGATGCAGGCCGGCGAGACCGACCTCGAATTCCTCAAGCGGCTGATGAGCAAGGCGCTGC
TGCACTTCTACTTCGTGCATTCGGGCAACGGCCACGCGCTGGTGTTCTCCAACACCGCCCAGTATCCCGAGGCGGTGCCG
GGCGGCCGGCCGCTGCGCTACACCTACAGCGACGCGCGGGCGCTCGGCATGGAGCAGGAGGACGTCGTCGGCGAATTCAG
CATGAAGAAGTCGATGGGCAGCACCGGCGTGCACGGCGTGCTCACGCAGCAGGACGGCGCGTGGCTCGCCAACCCGGTGG
TCGAGTTCAACTCGTTCTACGCCGACGACAACCAGGACGCCAACCCGCTGCCGTTCAACCTCTACAAGAGCTACCAGTAC
GGCGGCAGCAAGGAGGAGGCGCAGAGCCTGTCGAGCATCACCCGCAGCACGCTCGACGGCAGCCGCCACGAGCTGTCGGG
CGCCAGCAACTGCGCGCGCTTGCGCGTCGGCCACCGCTTCAGGCTGACCAGCGGCGCGGGACCCACCAACCCGGTCGAGC
CGTTCCTCGAGGACGGCGCGTTCGTGCTGACCGCGGTCCAGCACCAGGCCAGCGCCGACGGCAGCTATCGCAACCAGTTC
CAGGCCGGCGACGCGGCCTACCTCATCACGCCCTACTCGATCCAGGCGACCCAGCAGGGCAGCGTGCTGGCCGAGGTGGT
GCCGGACCCGGCCGCGCAGGCGCAGACCGCCATCGATTTCGGCGCGCGGCAATCGTTCAGCACCGGCGGCAGCAGCTTCA
GCGACGCGCTGAACGACACCGCGTACCCGCAGACCGGCGTGTACGTGCGCTTCTCGACCGCCCCGCGCGACGCGGCCCCG
GTGTGGGTCAAGCTCTCCGGCGCGATGCAGACGGCGCCCACGGTGGGCTCGATCGTCGTGGTGGGACGCGCCCAGGACGA
ATCGGAGCTGCCGGAGATCCAGAACATCATCCAGACCAACGGCAGCCAGCTGGTGGTGCCGGGCAGCTGGCTCTCCAGCA
CGCGCATCGGCAACAACTACTCGACCAGCTACGGCGACAATCAGAGCATCAGCTACGGCGCCCACTCGCCCGTCGATCTC
AAGCAGGCGACGCGGATCGTCACCGACGCCTATCGGAGCGGCCGCTTCGACAACACCAGCTTCTCGGAGGGCGCCGGCTA
CAGCTTCAGCACCTCGAGCCAGCGCGCGCCGGCCGCGAGCGCCGACAGCGGCGAGCTGTACGGCGCCGACCCGGTGGCGC
CCGACATCGTGAGCGCCTCGGAATCGTTCGGCTCGACCTACGGCCGCCAGATCGGCAGCGTCAGCTACAACCATTCGCAC
TTCGACAAGTCGATCAGCGACGCCTGGGTGCAGACCGAGCAATCGACGCGCTACACGGGCGACAGCACCAGCGTCAGCGT
CGGCCTGAGCAGCACCTCGATGGCCTCGATGGGAACCGCGTCGTCGGTCTCGGTCACCGGCACCTCGATCAGCAGCAACC
TGGTCGGCGCCTCGATCTCCGCCAACTTCACCGGCTCGTCGATCAGCACCAGCATGACCGGCAGCGTGATCGACAGCTCG
ATCGTCGGCGACACGGTTCGCAGCTCGGTCTCCGGCAACCTGATGGAAGACAGCGTGTCCGGCAACACGGTCCGCAACAC
CGTCTCCGGCAACCTGGTCGAAACCAGCGAGTCCGGCAACGTCACGCGCAACTCGCTGTCGGGCGACCTGATCGAGAACA
CCGAGTCCGGCGACATCACGCGCGACACCATCGCCGGCGTCGTGACGGAAAACGGCGTGGTGGTGTCGCGCAACGGCGTG
AAGACCGAGGGCGCCGTCGAGGAAATGGACGTGAAGGGCTCGCACAACCTCTGCGTGACGGCGGGCAGCACCACCCGCGT
CGAGACCTCCGGCGCGACCTCGCAGATCACCACCACCGCCGAGATCACGCTGGTGGAAACCGCCGGCCCCGGCGCGCGCG
TGTCGAACAACGACGAAACCCCGCACATCGACAACATCGTCACGCGGATCTACATGATCGAAGCCATGATCATCTTCATG
TGA

Upstream 100 bases:

>100_bases
GGCTCGGCCAGAGCGCCTGGCTCGCCGGCGCGCCCGCGCATCGCCACGCCACGCGGCCGGTGCGCTTTCTCATCACCACC
CGCGATTCCGGGAGCCTCGC

Downstream 100 bases:

>100_bases
GCCGCGATGAAAATCATCAAACCCCAATCGCTCGGCCTGCTGCAGAAGCCCTACACCCACCTCGGCCGGCATCGGCTGTC
GGTGGCCGTGATCGGCTTCT

Product: Rhs element Vgr protein

Products: NA

Alternate protein names: Type VI Secretion System Vgr Family Protein; Rhs-Family Protein; Type VI Secretion System VgrG Family Protein; Rhs Family Protein; VgrG Protein

Number of amino acids: Translated: 880; Mature: 879

Protein sequence:

>880_residues
MSDLASADARSFSVNRLAPPEPAVYLHCAVFIDRHTVLGAETFRLQSFQGQESVSEPFEYQLELVANSDGERALPVRFDE
LIGRAITVGIGKQIDPDWSTSLFRAALEGGVAPDDTRLSLFNGIVTSFAVKNRGTYAITMKPALHRLGLTNNYRVFHGRT
VWEMIELLLDAHHVAYAPFQHSQRNLAVIRRQDWMQAGETDLEFLKRLMSKALLHFYFVHSGNGHALVFSNTAQYPEAVP
GGRPLRYTYSDARALGMEQEDVVGEFSMKKSMGSTGVHGVLTQQDGAWLANPVVEFNSFYADDNQDANPLPFNLYKSYQY
GGSKEEAQSLSSITRSTLDGSRHELSGASNCARLRVGHRFRLTSGAGPTNPVEPFLEDGAFVLTAVQHQASADGSYRNQF
QAGDAAYLITPYSIQATQQGSVLAEVVPDPAAQAQTAIDFGARQSFSTGGSSFSDALNDTAYPQTGVYVRFSTAPRDAAP
VWVKLSGAMQTAPTVGSIVVVGRAQDESELPEIQNIIQTNGSQLVVPGSWLSSTRIGNNYSTSYGDNQSISYGAHSPVDL
KQATRIVTDAYRSGRFDNTSFSEGAGYSFSTSSQRAPAASADSGELYGADPVAPDIVSASESFGSTYGRQIGSVSYNHSH
FDKSISDAWVQTEQSTRYTGDSTSVSVGLSSTSMASMGTASSVSVTGTSISSNLVGASISANFTGSSISTSMTGSVIDSS
IVGDTVRSSVSGNLMEDSVSGNTVRNTVSGNLVETSESGNVTRNSLSGDLIENTESGDITRDTIAGVVTENGVVVSRNGV
KTEGAVEEMDVKGSHNLCVTAGSTTRVETSGATSQITTTAEITLVETAGPGARVSNNDETPHIDNIVTRIYMIEAMIIFM

Sequences:

>Translated_880_residues
MSDLASADARSFSVNRLAPPEPAVYLHCAVFIDRHTVLGAETFRLQSFQGQESVSEPFEYQLELVANSDGERALPVRFDE
LIGRAITVGIGKQIDPDWSTSLFRAALEGGVAPDDTRLSLFNGIVTSFAVKNRGTYAITMKPALHRLGLTNNYRVFHGRT
VWEMIELLLDAHHVAYAPFQHSQRNLAVIRRQDWMQAGETDLEFLKRLMSKALLHFYFVHSGNGHALVFSNTAQYPEAVP
GGRPLRYTYSDARALGMEQEDVVGEFSMKKSMGSTGVHGVLTQQDGAWLANPVVEFNSFYADDNQDANPLPFNLYKSYQY
GGSKEEAQSLSSITRSTLDGSRHELSGASNCARLRVGHRFRLTSGAGPTNPVEPFLEDGAFVLTAVQHQASADGSYRNQF
QAGDAAYLITPYSIQATQQGSVLAEVVPDPAAQAQTAIDFGARQSFSTGGSSFSDALNDTAYPQTGVYVRFSTAPRDAAP
VWVKLSGAMQTAPTVGSIVVVGRAQDESELPEIQNIIQTNGSQLVVPGSWLSSTRIGNNYSTSYGDNQSISYGAHSPVDL
KQATRIVTDAYRSGRFDNTSFSEGAGYSFSTSSQRAPAASADSGELYGADPVAPDIVSASESFGSTYGRQIGSVSYNHSH
FDKSISDAWVQTEQSTRYTGDSTSVSVGLSSTSMASMGTASSVSVTGTSISSNLVGASISANFTGSSISTSMTGSVIDSS
IVGDTVRSSVSGNLMEDSVSGNTVRNTVSGNLVETSESGNVTRNSLSGDLIENTESGDITRDTIAGVVTENGVVVSRNGV
KTEGAVEEMDVKGSHNLCVTAGSTTRVETSGATSQITTTAEITLVETAGPGARVSNNDETPHIDNIVTRIYMIEAMIIFM
>Mature_879_residues
SDLASADARSFSVNRLAPPEPAVYLHCAVFIDRHTVLGAETFRLQSFQGQESVSEPFEYQLELVANSDGERALPVRFDEL
IGRAITVGIGKQIDPDWSTSLFRAALEGGVAPDDTRLSLFNGIVTSFAVKNRGTYAITMKPALHRLGLTNNYRVFHGRTV
WEMIELLLDAHHVAYAPFQHSQRNLAVIRRQDWMQAGETDLEFLKRLMSKALLHFYFVHSGNGHALVFSNTAQYPEAVPG
GRPLRYTYSDARALGMEQEDVVGEFSMKKSMGSTGVHGVLTQQDGAWLANPVVEFNSFYADDNQDANPLPFNLYKSYQYG
GSKEEAQSLSSITRSTLDGSRHELSGASNCARLRVGHRFRLTSGAGPTNPVEPFLEDGAFVLTAVQHQASADGSYRNQFQ
AGDAAYLITPYSIQATQQGSVLAEVVPDPAAQAQTAIDFGARQSFSTGGSSFSDALNDTAYPQTGVYVRFSTAPRDAAPV
WVKLSGAMQTAPTVGSIVVVGRAQDESELPEIQNIIQTNGSQLVVPGSWLSSTRIGNNYSTSYGDNQSISYGAHSPVDLK
QATRIVTDAYRSGRFDNTSFSEGAGYSFSTSSQRAPAASADSGELYGADPVAPDIVSASESFGSTYGRQIGSVSYNHSHF
DKSISDAWVQTEQSTRYTGDSTSVSVGLSSTSMASMGTASSVSVTGTSISSNLVGASISANFTGSSISTSMTGSVIDSSI
VGDTVRSSVSGNLMEDSVSGNTVRNTVSGNLVETSESGNVTRNSLSGDLIENTESGDITRDTIAGVVTENGVVVSRNGVK
TEGAVEEMDVKGSHNLCVTAGSTTRVETSGATSQITTTAEITLVETAGPGARVSNNDETPHIDNIVTRIYMIEAMIIFM

Specific function: Unknown

COG id: COG3501

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 93984; Mature: 93853

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLASADARSFSVNRLAPPEPAVYLHCAVFIDRHTVLGAETFRLQSFQGQESVSEPFEY
CCCCCCCCCCCEECCCCCCCCCCEEEEEEEEEECCEEECCCEEEEECCCCCHHHCCCCEE
QLELVANSDGERALPVRFDELIGRAITVGIGKQIDPDWSTSLFRAALEGGVAPDDTRLSL
EEEEEECCCCCEECCEEHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCHHHH
FNGIVTSFAVKNRGTYAITMKPALHRLGLTNNYRVFHGRTVWEMIELLLDAHHVAYAPFQ
HHHHHHHHHCCCCCEEEEEECHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHEECCCC
HSQRNLAVIRRQDWMQAGETDLEFLKRLMSKALLHFYFVHSGNGHALVFSNTAQYPEAVP
CCCCCEEEEEHHHHHHCCCHHHHHHHHHHHHHHEEEEEEECCCCCEEEEECCCCCCCCCC
GGRPLRYTYSDARALGMEQEDVVGEFSMKKSMGSTGVHGVLTQQDGAWLANPVVEFNSFY
CCCEEEEEECHHHHCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEECCHHHHHCEE
ADDNQDANPLPFNLYKSYQYGGSKEEAQSLSSITRSTLDGSRHELSGASNCARLRVGHRF
CCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCEEEEECCEE
RLTSGAGPTNPVEPFLEDGAFVLTAVQHQASADGSYRNQFQAGDAAYLITPYSIQATQQG
EEECCCCCCCCCCHHHHCCCEEEEEEHHHHCCCCCHHHHCCCCCEEEEEECEEEEECCCC
SVLAEVVPDPAAQAQTAIDFGARQSFSTGGSSFSDALNDTAYPQTGVYVRFSTAPRDAAP
CEEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEEECCCCCCCC
VWVKLSGAMQTAPTVGSIVVVGRAQDESELPEIQNIIQTNGSQLVVPGSWLSSTRIGNNY
EEEEECCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCEEEECCCCHHHCCCCCCC
STSYGDNQSISYGAHSPVDLKQATRIVTDAYRSGRFDNTSFSEGAGYSFSTSSQRAPAAS
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ADSGELYGADPVAPDIVSASESFGSTYGRQIGSVSYNHSHFDKSISDAWVQTEQSTRYTG
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHCCCCCCEECC
DSTSVSVGLSSTSMASMGTASSVSVTGTSISSNLVGASISANFTGSSISTSMTGSVIDSS
CCCEEEEECCCCCHHHCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHH
IVGDTVRSSVSGNLMEDSVSGNTVRNTVSGNLVETSESGNVTRNSLSGDLIENTESGDIT
HHHHHHHHHCCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCCCHHCCCCCCCCC
RDTIAGVVTENGVVVSRNGVKTEGAVEEMDVKGSHNLCVTAGSTTRVETSGATSQITTTA
HHHHHEEEECCCEEEECCCCCCCCCHHHCCCCCCCCEEEECCCCEEEECCCCCCEEEEEE
EITLVETAGPGARVSNNDETPHIDNIVTRIYMIEAMIIFM
EEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SDLASADARSFSVNRLAPPEPAVYLHCAVFIDRHTVLGAETFRLQSFQGQESVSEPFEY
CCCCCCCCCCEECCCCCCCCCCEEEEEEEEEECCEEECCCEEEEECCCCCHHHCCCCEE
QLELVANSDGERALPVRFDELIGRAITVGIGKQIDPDWSTSLFRAALEGGVAPDDTRLSL
EEEEEECCCCCEECCEEHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCHHHH
FNGIVTSFAVKNRGTYAITMKPALHRLGLTNNYRVFHGRTVWEMIELLLDAHHVAYAPFQ
HHHHHHHHHCCCCCEEEEEECHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHEECCCC
HSQRNLAVIRRQDWMQAGETDLEFLKRLMSKALLHFYFVHSGNGHALVFSNTAQYPEAVP
CCCCCEEEEEHHHHHHCCCHHHHHHHHHHHHHHEEEEEEECCCCCEEEEECCCCCCCCCC
GGRPLRYTYSDARALGMEQEDVVGEFSMKKSMGSTGVHGVLTQQDGAWLANPVVEFNSFY
CCCEEEEEECHHHHCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEECCHHHHHCEE
ADDNQDANPLPFNLYKSYQYGGSKEEAQSLSSITRSTLDGSRHELSGASNCARLRVGHRF
CCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCEEEEECCEE
RLTSGAGPTNPVEPFLEDGAFVLTAVQHQASADGSYRNQFQAGDAAYLITPYSIQATQQG
EEECCCCCCCCCCHHHHCCCEEEEEEHHHHCCCCCHHHHCCCCCEEEEEECEEEEECCCC
SVLAEVVPDPAAQAQTAIDFGARQSFSTGGSSFSDALNDTAYPQTGVYVRFSTAPRDAAP
CEEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEEECCCCCCCC
VWVKLSGAMQTAPTVGSIVVVGRAQDESELPEIQNIIQTNGSQLVVPGSWLSSTRIGNNY
EEEEECCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCEEEECCCCHHHCCCCCCC
STSYGDNQSISYGAHSPVDLKQATRIVTDAYRSGRFDNTSFSEGAGYSFSTSSQRAPAAS
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ADSGELYGADPVAPDIVSASESFGSTYGRQIGSVSYNHSHFDKSISDAWVQTEQSTRYTG
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHCCCCCCEECC
DSTSVSVGLSSTSMASMGTASSVSVTGTSISSNLVGASISANFTGSSISTSMTGSVIDSS
CCCEEEEECCCCCHHHCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHH
IVGDTVRSSVSGNLMEDSVSGNTVRNTVSGNLVETSESGNVTRNSLSGDLIENTESGDIT
HHHHHHHHHCCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCCCHHCCCCCCCCC
RDTIAGVVTENGVVVSRNGVKTEGAVEEMDVKGSHNLCVTAGSTTRVETSGATSQITTTA
HHHHHEEEECCCEEEECCCCCCCCCHHHCCCCCCCCEEEECCCCEEEECCCCCCEEEEEE
EITLVETAGPGARVSNNDETPHIDNIVTRIYMIEAMIIFM
EEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA