The gene/protein map for NC_012721 is currently unavailable.
Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is 238024158

Identifier: 238024158

GI number: 238024158

Start: 884185

End: 884964

Strand: Reverse

Name: 238024158

Synonym: bglu_2g07360

Alternate gene names: NA

Gene position: 884964-884185 (Counterclockwise)

Preceding gene: 238024159

Following gene: 238024157

Centisome position: 31.3

GC content: 71.54

Gene sequence:

>780_bases
ATGCGTGACGCCCCGCACTGGCCGCAGCCGCATCCGGGCACGCCCGATCTGGTGGCGCGCTTCGCCGACTTCTACCAGGA
GCTGGCCGCCATCAAGGCCGCCCAGACGGGCGGCTGGCTGGCCGTCTATCTGGCCGGCGACGGCGCGCCCCAGCCCGTCA
CCGGCAGCGAGTTCGCCAAGCGCGTGAGCGCGCGGCTGCTCGCCCTGCTGCAACGCCAGGAGCGCCGCCACGCCGACGAG
GCCGACACCGCGGCCGGGCGCGCGGAGCGGCAGGCGCGCTACCTGATGGCGGCGCTCGCCGACGAGGTGCTGATCTTCGA
GCTCGACTGGCCCGGGCGCGACGCCTGGCTGCCGGTGCTGCTGGAGCAGGCGATGTTCGGATCGAGCAACGCGGGCTCGC
GGTTCTTCTCGATGGCCGAGCAGCTGATCCAGGACACCGCGCGCACCGCGCTGCAAGCCGAGCTCGCCTCGGTGTTCCTG
CTCGCGATGGAGCTGGGCTTCAAGGGCCGCTACCGCGCGCGCCAGGCGCAGCCGCAGCTGGAACGGATCCGCGGCCAGCT
CTACCAGGTCGTGTTCGCCGCCAGCGGCAAGCTCGACGACGAGCAGCCGGCATTCGCCGAGGCCTACGCGTATCCGCTCA
CGGGCCGCCGCGACGAGCGCCTCGCGCCGCTGTCGCCGTGGCGCAATCTCGGGCTCTACGGGTTGATCGGCTACCTCGTG
CTGTCGGTGATCGCGTGGTTCGTGCTGATGCACCCGTTCGAACATTATCTGAATGGCTAG

Upstream 100 bases:

>100_bases
CGCAAGAACGACGGCCTGCCGGCCGCGATCGTGCTGTATCGCCGCAAGCAGAAGAACGGCGCGAGCGCCGGCGCCGCGCC
GGCGCCGTCCGGGGACCAGC

Downstream 100 bases:

>100_bases
TCACGGCCTGAGCAGGAGCGCATTCGTGGACGCAATACTGAAATCGACCGCCTGGCTGAAGGCGCAGACCGGCTGGGCAC
CCGCTGCCGGCACGCTGAAG

Product: type IV / VI secretion system protein DotU

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MRDAPHWPQPHPGTPDLVARFADFYQELAAIKAAQTGGWLAVYLAGDGAPQPVTGSEFAKRVSARLLALLQRQERRHADE
ADTAAGRAERQARYLMAALADEVLIFELDWPGRDAWLPVLLEQAMFGSSNAGSRFFSMAEQLIQDTARTALQAELASVFL
LAMELGFKGRYRARQAQPQLERIRGQLYQVVFAASGKLDDEQPAFAEAYAYPLTGRRDERLAPLSPWRNLGLYGLIGYLV
LSVIAWFVLMHPFEHYLNG

Sequences:

>Translated_259_residues
MRDAPHWPQPHPGTPDLVARFADFYQELAAIKAAQTGGWLAVYLAGDGAPQPVTGSEFAKRVSARLLALLQRQERRHADE
ADTAAGRAERQARYLMAALADEVLIFELDWPGRDAWLPVLLEQAMFGSSNAGSRFFSMAEQLIQDTARTALQAELASVFL
LAMELGFKGRYRARQAQPQLERIRGQLYQVVFAASGKLDDEQPAFAEAYAYPLTGRRDERLAPLSPWRNLGLYGLIGYLV
LSVIAWFVLMHPFEHYLNG
>Mature_259_residues
MRDAPHWPQPHPGTPDLVARFADFYQELAAIKAAQTGGWLAVYLAGDGAPQPVTGSEFAKRVSARLLALLQRQERRHADE
ADTAAGRAERQARYLMAALADEVLIFELDWPGRDAWLPVLLEQAMFGSSNAGSRFFSMAEQLIQDTARTALQAELASVFL
LAMELGFKGRYRARQAQPQLERIRGQLYQVVFAASGKLDDEQPAFAEAYAYPLTGRRDERLAPLSPWRNLGLYGLIGYLV
LSVIAWFVLMHPFEHYLNG

Specific function: Unknown

COG id: COG3455

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28934; Mature: 28934

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDAPHWPQPHPGTPDLVARFADFYQELAAIKAAQTGGWLAVYLAGDGAPQPVTGSEFAK
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHH
RVSARLLALLQRQERRHADEADTAAGRAERQARYLMAALADEVLIFELDWPGRDAWLPVL
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHH
LEQAMFGSSNAGSRFFSMAEQLIQDTARTALQAELASVFLLAMELGFKGRYRARQAQPQL
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHH
ERIRGQLYQVVFAASGKLDDEQPAFAEAYAYPLTGRRDERLAPLSPWRNLGLYGLIGYLV
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHCCHHHHHHHHH
LSVIAWFVLMHPFEHYLNG
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRDAPHWPQPHPGTPDLVARFADFYQELAAIKAAQTGGWLAVYLAGDGAPQPVTGSEFAK
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHH
RVSARLLALLQRQERRHADEADTAAGRAERQARYLMAALADEVLIFELDWPGRDAWLPVL
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHH
LEQAMFGSSNAGSRFFSMAEQLIQDTARTALQAELASVFLLAMELGFKGRYRARQAQPQL
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHH
ERIRGQLYQVVFAASGKLDDEQPAFAEAYAYPLTGRRDERLAPLSPWRNLGLYGLIGYLV
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHCCHHHHHHHHH
LSVIAWFVLMHPFEHYLNG
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA