| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024141
Identifier: 238024141
GI number: 238024141
Start: 844427
End: 845677
Strand: Direct
Name: 238024141
Synonym: bglu_2g07170
Alternate gene names: NA
Gene position: 844427-845677 (Clockwise)
Preceding gene: 238024140
Following gene: 238024142
Centisome position: 29.87
GC content: 75.78
Gene sequence:
>1251_bases TTGACCTCGATGACGCCGCGCTTGGCGACGTGCTGGCCGTGCTGCCCGCGCGTGCCGACGGATCTGGCGCGGCTCGCGCG GCTGGCCGCGGGCGGCGAACCGGTGGTGACGGTGGTAGGCAAGTACAACCACGGCAAGAGCAGCCTGCTCAACGAGCTGG CCGGCAAGCCGCTGTTCGCCGTCTCCGACCGGCGCGAGACCGTGGCGCTGGCGCACGGGCGGCACGCGGGCGTGCGCTGG CTCGACGCGCCGGGGCTCGACGCCGACGTGGCCGGGGCCGACGATCGCCACGCGCTGCGCGCGGTCCGGCTCGAGGCGGA CATCCGCCTGTTCGTCCACGCGGCCGGGGAGGGCGAGCTCGACGCGCGCGAGCGGCAATGGCTCGTGGCCCTGCTCGACG ACGACGCGCGCAGCGCGCGCCGGACCTTCCTGGTGCTGTCGCAGATCGATCAGCTGGCCGACGCCGCCGCGCTCGCCCGG GTGGTGGCCGCGCTGGTCGCGCAGGTGCCCGCGGCCGAGCCGTGCTGCGTGTCGTCGGTGCGGCATCGCAACGGGCAGCA GGGCGGCAAGTGCCTGCTGGTCGAGCGCAGCGGGATTCCGGCGCTGCAGGCGGCGCTCGGTGCCGCGCTCGAACGGGTGC CGGCCGCGCGTGCCCGCGAGGCCGCGCGGCTGCGCACGGACATCGCCGCGCAGCTGGGCGCGCTGCGCGCCGAGCAGGAC GCGGCGCTGGCGCGGCTGCGCGAGCGGCAACGGCAGCAGCGCGACGGCTTCGAGCGCGGCCTGCGCGCCGTGATCGACAC GGTCGGCGCGGACCTCTGCGCGCTGCTCGATTCGCTCGGCAGCGATCACGCGAGCGTGCCCGACACGGCGCGCGACCCCT ACGCGAGCACCGCCGGCAAGCGCGAGCGCGCGCGGATCCAGATCGCCTATTCGCGCGCCTGCATCGAGATCGACGGCTTC CTCGCCGGACACGGCGTGTCCGAGCTGCCGCCCGGGCGCGCGATGGCGGCGGGCAGCCTCCATTCCGTGATGATCGCCGT GATGGGCATTTCCGTGAAGTTCCGCCGCGATCTGCGCCGCATGTTCGGCGAGGCGGCCGGCCGCGACCGGCTGCGCCGCG ACTTCACGCACTACTATGAACTGTCGGCGGACCGCGTGGCGCTCGCGAGCGAGCTGGCCGCGCAGGAGCAGGCCGTTGCC GCCACGGCGCGGGCGGCGGCCGCGATCGACGCATGGCGGGCCGGCGCATGA
Upstream 100 bases:
>100_bases TCGGCCGCCGCCTGAGTCCCGCGCCGCGCCCGGCCGGGCCGCGCGCCTTGCCGCGGCCCGCCGATCGATCCTTGCCCGCC GGGAGGAAGCTGCGTGTCCA
Downstream 100 bases:
>100_bases CGGCGCTCGCGAGCGAGGAACGGCGCTTCATCGACGCGGCCGACGGGCTGGCGTTCGGCGCGCGCGATCTGTCGGGCCTG TTCGACGCGTTCGAGGCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: ORF1 [H]
Number of amino acids: Translated: 416; Mature: 415
Protein sequence:
>416_residues MTSMTPRLATCWPCCPRVPTDLARLARLAAGGEPVVTVVGKYNHGKSSLLNELAGKPLFAVSDRRETVALAHGRHAGVRW LDAPGLDADVAGADDRHALRAVRLEADIRLFVHAAGEGELDARERQWLVALLDDDARSARRTFLVLSQIDQLADAAALAR VVAALVAQVPAAEPCCVSSVRHRNGQQGGKCLLVERSGIPALQAALGAALERVPAARAREAARLRTDIAAQLGALRAEQD AALARLRERQRQQRDGFERGLRAVIDTVGADLCALLDSLGSDHASVPDTARDPYASTAGKRERARIQIAYSRACIEIDGF LAGHGVSELPPGRAMAAGSLHSVMIAVMGISVKFRRDLRRMFGEAAGRDRLRRDFTHYYELSADRVALASELAAQEQAVA ATARAAAAIDAWRAGA
Sequences:
>Translated_416_residues MTSMTPRLATCWPCCPRVPTDLARLARLAAGGEPVVTVVGKYNHGKSSLLNELAGKPLFAVSDRRETVALAHGRHAGVRW LDAPGLDADVAGADDRHALRAVRLEADIRLFVHAAGEGELDARERQWLVALLDDDARSARRTFLVLSQIDQLADAAALAR VVAALVAQVPAAEPCCVSSVRHRNGQQGGKCLLVERSGIPALQAALGAALERVPAARAREAARLRTDIAAQLGALRAEQD AALARLRERQRQQRDGFERGLRAVIDTVGADLCALLDSLGSDHASVPDTARDPYASTAGKRERARIQIAYSRACIEIDGF LAGHGVSELPPGRAMAAGSLHSVMIAVMGISVKFRRDLRRMFGEAAGRDRLRRDFTHYYELSADRVALASELAAQEQAVA ATARAAAAIDAWRAGA >Mature_415_residues TSMTPRLATCWPCCPRVPTDLARLARLAAGGEPVVTVVGKYNHGKSSLLNELAGKPLFAVSDRRETVALAHGRHAGVRWL DAPGLDADVAGADDRHALRAVRLEADIRLFVHAAGEGELDARERQWLVALLDDDARSARRTFLVLSQIDQLADAAALARV VAALVAQVPAAEPCCVSSVRHRNGQQGGKCLLVERSGIPALQAALGAALERVPAARAREAARLRTDIAAQLGALRAEQDA ALARLRERQRQQRDGFERGLRAVIDTVGADLCALLDSLGSDHASVPDTARDPYASTAGKRERARIQIAYSRACIEIDGFL AGHGVSELPPGRAMAAGSLHSVMIAVMGISVKFRRDLRRMFGEAAGRDRLRRDFTHYYELSADRVALASELAAQEQAVAA TARAAAAIDAWRAGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006703 [H]
Pfam domain/function: PF04548 AIG1 [H]
EC number: NA
Molecular weight: Translated: 44506; Mature: 44375
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: PS00626 RCC1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSMTPRLATCWPCCPRVPTDLARLARLAAGGEPVVTVVGKYNHGKSSLLNELAGKPLFA CCCCCCCHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCCCEEE VSDRRETVALAHGRHAGVRWLDAPGLDADVAGADDRHALRAVRLEADIRLFVHAAGEGEL ECCCCCEEEEECCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHEECCEEEEEEECCCCCC DARERQWLVALLDDDARSARRTFLVLSQIDQLADAAALARVVAALVAQVPAAEPCCVSSV CCHHHCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH RHRNGQQGGKCLLVERSGIPALQAALGAALERVPAARAREAARLRTDIAAQLGALRAEQD HHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH AALARLRERQRQQRDGFERGLRAVIDTVGADLCALLDSLGSDHASVPDTARDPYASTAGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCC RERARIQIAYSRACIEIDGFLAGHGVSELPPGRAMAAGSLHSVMIAVMGISVKFRRDLRR CHHHEEEEEEHHEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHH MFGEAAGRDRLRRDFTHYYELSADRVALASELAAQEQAVAATARAAAAIDAWRAGA HHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TSMTPRLATCWPCCPRVPTDLARLARLAAGGEPVVTVVGKYNHGKSSLLNELAGKPLFA CCCCCCHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCCCEEE VSDRRETVALAHGRHAGVRWLDAPGLDADVAGADDRHALRAVRLEADIRLFVHAAGEGEL ECCCCCEEEEECCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHEECCEEEEEEECCCCCC DARERQWLVALLDDDARSARRTFLVLSQIDQLADAAALARVVAALVAQVPAAEPCCVSSV CCHHHCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH RHRNGQQGGKCLLVERSGIPALQAALGAALERVPAARAREAARLRTDIAAQLGALRAEQD HHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH AALARLRERQRQQRDGFERGLRAVIDTVGADLCALLDSLGSDHASVPDTARDPYASTAGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCC RERARIQIAYSRACIEIDGFLAGHGVSELPPGRAMAAGSLHSVMIAVMGISVKFRRDLRR CHHHEEEEEEHHEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHH MFGEAAGRDRLRRDFTHYYELSADRVALASELAAQEQAVAATARAAAAIDAWRAGA HHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1885518 [H]