| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is catA1 [H]
Identifier: 238024140
GI number: 238024140
Start: 843403
End: 844341
Strand: Direct
Name: catA1 [H]
Synonym: bglu_2g07160
Alternate gene names: 238024140
Gene position: 843403-844341 (Clockwise)
Preceding gene: 238024139
Following gene: 238024141
Centisome position: 29.83
GC content: 70.39
Gene sequence:
>939_bases ATGAACGTTCAGGTGTTTCAGACCCAGGAAGTGCAGGACCTGCTCAGAGCCGCGGCGAACCTCGAGGACGACGGCGGCGG CGACGCGCGCCTCAAGCGCATCGTCCACCGGCTGCTCGGCGACCTGTTCCGCGCCATCGACGAGCTCGACATCACGCCCG ACGAGGTCTGGGCCGGCATCCACTACCTCAACAAGCTCGGCCAGGACGGCGAGGCGGCGCTGCTCGCCGCGGGCCTCGGC CTCGAGAAGTACCTGGACATCCGCATGGACGCCGAGGACCGCGAGGCCGGCATCACGGGCGGCACGCCGCGCACCATCGA GGGGCCGCTCTACGTGGCCGGCGCGCCGGTGCAGGACGGCGTGGCGAAGATCGATCTCGACGCCGACGAGGACGCCGGCC CGCTCGTGATCCACGGCACCATCAAGGGGCCGGACGGCAAGCCGGTGGCGGGCGCGGTGATCGAGTGCTGGCACGCCAAC TCGAAGGGCTTCTATTCGCATTTCGATCCGACCGGCGCGCAGACCCCGTTCAACCTGCGCGGCGCCGTGCGCACCGGCGC GGACGGCCGCTATGAGTTTCGCACGCTGATGCCGGTCGGCTACGGCTGCCCGCCGCACGGCGCGACCCAGCAGCTGCTGA ACGGGCTCGGGCGCCACGGCAACCGCCCCGCGCACGTGCATTTCTTCGTGACCAGCGAGGCGCACCGCAAGCTGACCACG CAGTTCAACATCGAGGGCGATCCGCTGATCTGGGACGACTTCGCCTATGCCACGCGCGAGTCGCTGATTCCGCATGTCGT CGAAAAGACGGGCGGCGCGGCGCTCGGCCTGAAGGCCGACGCGTACCGGGCGATCGAATTCGACATCGTGCTGACCGCGC GGGTGGCCGGCCGCGACAACCAGATCGTGCAGCGCCCGCGCGCCTCGGCCGCCGCCTGA
Upstream 100 bases:
>100_bases TCTCGGTCATGCCGCTGTGCCGGCACCCGTCGTCGGTGCGCGACGGCGACGCCTGAGGACGCCGGCGCGCCTCGCCCCTA TCAACAAGGAGACAATCCCC
Downstream 100 bases:
>100_bases GTCCCGCGCCGCGCCCGGCCGGGCCGCGCGCCTTGCCGCGGCCCGCCGATCGATCCTTGCCCGCCGGGAGGAAGCTGCGT GTCCATTGACCTCGATGACG
Product: Catechol 1,2-dioxygenase
Products: NA
Alternate protein names: 1,2-CTD 1; CDI1 [H]
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MNVQVFQTQEVQDLLRAAANLEDDGGGDARLKRIVHRLLGDLFRAIDELDITPDEVWAGIHYLNKLGQDGEAALLAAGLG LEKYLDIRMDAEDREAGITGGTPRTIEGPLYVAGAPVQDGVAKIDLDADEDAGPLVIHGTIKGPDGKPVAGAVIECWHAN SKGFYSHFDPTGAQTPFNLRGAVRTGADGRYEFRTLMPVGYGCPPHGATQQLLNGLGRHGNRPAHVHFFVTSEAHRKLTT QFNIEGDPLIWDDFAYATRESLIPHVVEKTGGAALGLKADAYRAIEFDIVLTARVAGRDNQIVQRPRASAAA
Sequences:
>Translated_312_residues MNVQVFQTQEVQDLLRAAANLEDDGGGDARLKRIVHRLLGDLFRAIDELDITPDEVWAGIHYLNKLGQDGEAALLAAGLG LEKYLDIRMDAEDREAGITGGTPRTIEGPLYVAGAPVQDGVAKIDLDADEDAGPLVIHGTIKGPDGKPVAGAVIECWHAN SKGFYSHFDPTGAQTPFNLRGAVRTGADGRYEFRTLMPVGYGCPPHGATQQLLNGLGRHGNRPAHVHFFVTSEAHRKLTT QFNIEGDPLIWDDFAYATRESLIPHVVEKTGGAALGLKADAYRAIEFDIVLTARVAGRDNQIVQRPRASAAA >Mature_312_residues MNVQVFQTQEVQDLLRAAANLEDDGGGDARLKRIVHRLLGDLFRAIDELDITPDEVWAGIHYLNKLGQDGEAALLAAGLG LEKYLDIRMDAEDREAGITGGTPRTIEGPLYVAGAPVQDGVAKIDLDADEDAGPLVIHGTIKGPDGKPVAGAVIECWHAN SKGFYSHFDPTGAQTPFNLRGAVRTGADGRYEFRTLMPVGYGCPPHGATQQLLNGLGRHGNRPAHVHFFVTSEAHRKLTT QFNIEGDPLIWDDFAYATRESLIPHVVEKTGGAALGLKADAYRAIEFDIVLTARVAGRDNQIVQRPRASAAA
Specific function: Can cleave 4-methyl-, 4-chloro-, and 3-methoxycatechol at lower rates than catechol, but has no activity with 4- nitrocatechol or protocatechuic acid [H]
COG id: COG3485
COG function: function code Q; Protocatechuate 3,4-dioxygenase beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the intradiol ring-cleavage dioxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007535 - InterPro: IPR012801 - InterPro: IPR000627 - InterPro: IPR015889 [H]
Pfam domain/function: PF00775 Dioxygenase_C; PF04444 Dioxygenase_N [H]
EC number: =1.13.11.1 [H]
Molecular weight: Translated: 33645; Mature: 33645
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: PS00083 INTRADIOL_DIOXYGENAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVQVFQTQEVQDLLRAAANLEDDGGGDARLKRIVHRLLGDLFRAIDELDITPDEVWAGI CCEEEECHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH HYLNKLGQDGEAALLAAGLGLEKYLDIRMDAEDREAGITGGTPRTIEGPLYVAGAPVQDG HHHHHHCCCCCEEEEEECCCHHHHEEEEECCCCCCCCCCCCCCCEECCCEEEECCCCCCC VAKIDLDADEDAGPLVIHGTIKGPDGKPVAGAVIECWHANSKGFYSHFDPTGAQTPFNLR CEEEECCCCCCCCCEEEEEEEECCCCCCHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCC GAVRTGADGRYEFRTLMPVGYGCPPHGATQQLLNGLGRHGNRPAHVHFFVTSEAHRKLTT EEEECCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCHHHEEEE QFNIEGDPLIWDDFAYATRESLIPHVVEKTGGAALGLKADAYRAIEFDIVLTARVAGRDN EEECCCCCEEECCHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEEEEEEEEEECCCCC QIVQRPRASAAA HHHHCCCCCCCC >Mature Secondary Structure MNVQVFQTQEVQDLLRAAANLEDDGGGDARLKRIVHRLLGDLFRAIDELDITPDEVWAGI CCEEEECHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH HYLNKLGQDGEAALLAAGLGLEKYLDIRMDAEDREAGITGGTPRTIEGPLYVAGAPVQDG HHHHHHCCCCCEEEEEECCCHHHHEEEEECCCCCCCCCCCCCCCEECCCEEEECCCCCCC VAKIDLDADEDAGPLVIHGTIKGPDGKPVAGAVIECWHANSKGFYSHFDPTGAQTPFNLR CEEEECCCCCCCCCEEEEEEEECCCCCCHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCC GAVRTGADGRYEFRTLMPVGYGCPPHGATQQLLNGLGRHGNRPAHVHFFVTSEAHRKLTT EEEECCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCHHHEEEE QFNIEGDPLIWDDFAYATRESLIPHVVEKTGGAALGLKADAYRAIEFDIVLTARVAGRDN EEECCCCCEEECCHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEEEEEEEEEECCCCC QIVQRPRASAAA HHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9260969; 9473520 [H]