Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

Click here to switch to the map view.

The map label for this gene is catA1 [H]

Identifier: 238024140

GI number: 238024140

Start: 843403

End: 844341

Strand: Direct

Name: catA1 [H]

Synonym: bglu_2g07160

Alternate gene names: 238024140

Gene position: 843403-844341 (Clockwise)

Preceding gene: 238024139

Following gene: 238024141

Centisome position: 29.83

GC content: 70.39

Gene sequence:

>939_bases
ATGAACGTTCAGGTGTTTCAGACCCAGGAAGTGCAGGACCTGCTCAGAGCCGCGGCGAACCTCGAGGACGACGGCGGCGG
CGACGCGCGCCTCAAGCGCATCGTCCACCGGCTGCTCGGCGACCTGTTCCGCGCCATCGACGAGCTCGACATCACGCCCG
ACGAGGTCTGGGCCGGCATCCACTACCTCAACAAGCTCGGCCAGGACGGCGAGGCGGCGCTGCTCGCCGCGGGCCTCGGC
CTCGAGAAGTACCTGGACATCCGCATGGACGCCGAGGACCGCGAGGCCGGCATCACGGGCGGCACGCCGCGCACCATCGA
GGGGCCGCTCTACGTGGCCGGCGCGCCGGTGCAGGACGGCGTGGCGAAGATCGATCTCGACGCCGACGAGGACGCCGGCC
CGCTCGTGATCCACGGCACCATCAAGGGGCCGGACGGCAAGCCGGTGGCGGGCGCGGTGATCGAGTGCTGGCACGCCAAC
TCGAAGGGCTTCTATTCGCATTTCGATCCGACCGGCGCGCAGACCCCGTTCAACCTGCGCGGCGCCGTGCGCACCGGCGC
GGACGGCCGCTATGAGTTTCGCACGCTGATGCCGGTCGGCTACGGCTGCCCGCCGCACGGCGCGACCCAGCAGCTGCTGA
ACGGGCTCGGGCGCCACGGCAACCGCCCCGCGCACGTGCATTTCTTCGTGACCAGCGAGGCGCACCGCAAGCTGACCACG
CAGTTCAACATCGAGGGCGATCCGCTGATCTGGGACGACTTCGCCTATGCCACGCGCGAGTCGCTGATTCCGCATGTCGT
CGAAAAGACGGGCGGCGCGGCGCTCGGCCTGAAGGCCGACGCGTACCGGGCGATCGAATTCGACATCGTGCTGACCGCGC
GGGTGGCCGGCCGCGACAACCAGATCGTGCAGCGCCCGCGCGCCTCGGCCGCCGCCTGA

Upstream 100 bases:

>100_bases
TCTCGGTCATGCCGCTGTGCCGGCACCCGTCGTCGGTGCGCGACGGCGACGCCTGAGGACGCCGGCGCGCCTCGCCCCTA
TCAACAAGGAGACAATCCCC

Downstream 100 bases:

>100_bases
GTCCCGCGCCGCGCCCGGCCGGGCCGCGCGCCTTGCCGCGGCCCGCCGATCGATCCTTGCCCGCCGGGAGGAAGCTGCGT
GTCCATTGACCTCGATGACG

Product: Catechol 1,2-dioxygenase

Products: NA

Alternate protein names: 1,2-CTD 1; CDI1 [H]

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MNVQVFQTQEVQDLLRAAANLEDDGGGDARLKRIVHRLLGDLFRAIDELDITPDEVWAGIHYLNKLGQDGEAALLAAGLG
LEKYLDIRMDAEDREAGITGGTPRTIEGPLYVAGAPVQDGVAKIDLDADEDAGPLVIHGTIKGPDGKPVAGAVIECWHAN
SKGFYSHFDPTGAQTPFNLRGAVRTGADGRYEFRTLMPVGYGCPPHGATQQLLNGLGRHGNRPAHVHFFVTSEAHRKLTT
QFNIEGDPLIWDDFAYATRESLIPHVVEKTGGAALGLKADAYRAIEFDIVLTARVAGRDNQIVQRPRASAAA

Sequences:

>Translated_312_residues
MNVQVFQTQEVQDLLRAAANLEDDGGGDARLKRIVHRLLGDLFRAIDELDITPDEVWAGIHYLNKLGQDGEAALLAAGLG
LEKYLDIRMDAEDREAGITGGTPRTIEGPLYVAGAPVQDGVAKIDLDADEDAGPLVIHGTIKGPDGKPVAGAVIECWHAN
SKGFYSHFDPTGAQTPFNLRGAVRTGADGRYEFRTLMPVGYGCPPHGATQQLLNGLGRHGNRPAHVHFFVTSEAHRKLTT
QFNIEGDPLIWDDFAYATRESLIPHVVEKTGGAALGLKADAYRAIEFDIVLTARVAGRDNQIVQRPRASAAA
>Mature_312_residues
MNVQVFQTQEVQDLLRAAANLEDDGGGDARLKRIVHRLLGDLFRAIDELDITPDEVWAGIHYLNKLGQDGEAALLAAGLG
LEKYLDIRMDAEDREAGITGGTPRTIEGPLYVAGAPVQDGVAKIDLDADEDAGPLVIHGTIKGPDGKPVAGAVIECWHAN
SKGFYSHFDPTGAQTPFNLRGAVRTGADGRYEFRTLMPVGYGCPPHGATQQLLNGLGRHGNRPAHVHFFVTSEAHRKLTT
QFNIEGDPLIWDDFAYATRESLIPHVVEKTGGAALGLKADAYRAIEFDIVLTARVAGRDNQIVQRPRASAAA

Specific function: Can cleave 4-methyl-, 4-chloro-, and 3-methoxycatechol at lower rates than catechol, but has no activity with 4- nitrocatechol or protocatechuic acid [H]

COG id: COG3485

COG function: function code Q; Protocatechuate 3,4-dioxygenase beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the intradiol ring-cleavage dioxygenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007535
- InterPro:   IPR012801
- InterPro:   IPR000627
- InterPro:   IPR015889 [H]

Pfam domain/function: PF00775 Dioxygenase_C; PF04444 Dioxygenase_N [H]

EC number: =1.13.11.1 [H]

Molecular weight: Translated: 33645; Mature: 33645

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: PS00083 INTRADIOL_DIOXYGENAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVQVFQTQEVQDLLRAAANLEDDGGGDARLKRIVHRLLGDLFRAIDELDITPDEVWAGI
CCEEEECHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
HYLNKLGQDGEAALLAAGLGLEKYLDIRMDAEDREAGITGGTPRTIEGPLYVAGAPVQDG
HHHHHHCCCCCEEEEEECCCHHHHEEEEECCCCCCCCCCCCCCCEECCCEEEECCCCCCC
VAKIDLDADEDAGPLVIHGTIKGPDGKPVAGAVIECWHANSKGFYSHFDPTGAQTPFNLR
CEEEECCCCCCCCCEEEEEEEECCCCCCHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCC
GAVRTGADGRYEFRTLMPVGYGCPPHGATQQLLNGLGRHGNRPAHVHFFVTSEAHRKLTT
EEEECCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCHHHEEEE
QFNIEGDPLIWDDFAYATRESLIPHVVEKTGGAALGLKADAYRAIEFDIVLTARVAGRDN
EEECCCCCEEECCHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEEEEEEEEEECCCCC
QIVQRPRASAAA
HHHHCCCCCCCC
>Mature Secondary Structure
MNVQVFQTQEVQDLLRAAANLEDDGGGDARLKRIVHRLLGDLFRAIDELDITPDEVWAGI
CCEEEECHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
HYLNKLGQDGEAALLAAGLGLEKYLDIRMDAEDREAGITGGTPRTIEGPLYVAGAPVQDG
HHHHHHCCCCCEEEEEECCCHHHHEEEEECCCCCCCCCCCCCCCEECCCEEEECCCCCCC
VAKIDLDADEDAGPLVIHGTIKGPDGKPVAGAVIECWHANSKGFYSHFDPTGAQTPFNLR
CEEEECCCCCCCCCEEEEEEEECCCCCCHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCC
GAVRTGADGRYEFRTLMPVGYGCPPHGATQQLLNGLGRHGNRPAHVHFFVTSEAHRKLTT
EEEECCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCHHHEEEE
QFNIEGDPLIWDDFAYATRESLIPHVVEKTGGAALGLKADAYRAIEFDIVLTARVAGRDN
EEECCCCCEEECCHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEEEEEEEEEECCCCC
QIVQRPRASAAA
HHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9260969; 9473520 [H]