| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is catC1 [H]
Identifier: 238024139
GI number: 238024139
Start: 843068
End: 843358
Strand: Direct
Name: catC1 [H]
Synonym: bglu_2g07150
Alternate gene names: 238024139
Gene position: 843068-843358 (Clockwise)
Preceding gene: 238024138
Following gene: 238024140
Centisome position: 29.82
GC content: 65.29
Gene sequence:
>291_bases ATGCTTTTCCACGTGCGCATGGACGTCAATCTGCCGGCCGACCTGCCCGCCGACGTCGCCGACGCGATCAAGCTGCGCGA GAAGGCCTATTCCCAGGAGCTGCAGCGCAGCGGCAAGTGGCGCCACATCTGGCGTATCGTCGGCGAATACGCGAACGTCA GCGTGTTCGACGTCGAGAGCAATGCCGAGCTGCACGAACTGCTCACCGCGCTGCCGCTGTTCCCTTACATGACGATCTCG GTCATGCCGCTGTGCCGGCACCCGTCGTCGGTGCGCGACGGCGACGCCTGA
Upstream 100 bases:
>100_bases CCTCGGCATCGAGCTCGACGAGGCCAAGCTGCGCCGCTTCACGCGCGACGGGCTGATCCGCGTGACCCGTTGATTCCCAT CGATCGAAAGGAACCCCGAG
Downstream 100 bases:
>100_bases GGACGCCGGCGCGCCTCGCCCCTATCAACAAGGAGACAATCCCCATGAACGTTCAGGTGTTTCAGACCCAGGAAGTGCAG GACCTGCTCAGAGCCGCGGC
Product: Muconolactone Delta-isomerase
Products: NA
Alternate protein names: MIase 1 [H]
Number of amino acids: Translated: 96; Mature: 96
Protein sequence:
>96_residues MLFHVRMDVNLPADLPADVADAIKLREKAYSQELQRSGKWRHIWRIVGEYANVSVFDVESNAELHELLTALPLFPYMTIS VMPLCRHPSSVRDGDA
Sequences:
>Translated_96_residues MLFHVRMDVNLPADLPADVADAIKLREKAYSQELQRSGKWRHIWRIVGEYANVSVFDVESNAELHELLTALPLFPYMTIS VMPLCRHPSSVRDGDA >Mature_96_residues MLFHVRMDVNLPADLPADVADAIKLREKAYSQELQRSGKWRHIWRIVGEYANVSVFDVESNAELHELLTALPLFPYMTIS VMPLCRHPSSVRDGDA
Specific function: Unknown
COG id: COG4829
COG function: function code Q; Muconolactone delta-isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the muconolactone Delta-isomerase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011008 - InterPro: IPR003464 - ProDom: PD006619 [H]
Pfam domain/function: PF02426 MIase [H]
EC number: =5.3.3.4 [H]
Molecular weight: Translated: 10950; Mature: 10950
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFHVRMDVNLPADLPADVADAIKLREKAYSQELQRSGKWRHIWRIVGEYANVSVFDVES CEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCC NAELHELLTALPLFPYMTISVMPLCRHPSSVRDGDA CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MLFHVRMDVNLPADLPADVADAIKLREKAYSQELQRSGKWRHIWRIVGEYANVSVFDVES CEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCC NAELHELLTALPLFPYMTISVMPLCRHPSSVRDGDA CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9260969; 9473520 [H]