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The map label for this gene is peh [H]

Identifier: 238024131

GI number: 238024131

Start: 833645

End: 835033

Strand: Reverse

Name: peh [H]

Synonym: bglu_2g07060

Alternate gene names: 238024131

Gene position: 835033-833645 (Counterclockwise)

Preceding gene: 238024132

Following gene: 238024130

Centisome position: 29.53

GC content: 67.46

Gene sequence:

>1389_bases
ATGACTCCGAGAAACCGCGTCCGCACCAGCGTCACGGCCACCTTTGGCGCGCTCGCCAGCCTGATCGCGTTCGCCGCGCC
GCCGGCCGCCCATGCAGCGAGCTGCGCGACGCCGCAATGGAGCAGTTCGCCGGCCGCCAACACGAGCGCCCTGCAAAGCG
CGATCAACCGGTGCTCGGGCGCCGCCGGCAACCCGGGCCTGATCGACCTGCGCGCCAACAACGGCGTGTCCACGGCCGTC
ATCACGAGCGTCAAGCTCGCCAGCAACATCGTGCTGAAGCTGGAAAAGGGCTTCACGCTGAAGGGCTCGCCGGGCCAGCC
CTCGGACGGCGCGATGCTGACCGGCAGCGGTCTGAGCAACGTGACCCTCACCGGCACCGGCGCGATCGACGGCGACGGAC
AGAGCTACTGGGCGAGCGCGGTGGGCAAGAACAACACGGCACGGCCGCGGCTGATCAAGCTGACGGGCTCGAACCTGCAG
ATCGGCTCGAATTTCACCGACGCGGGCAAGCCGCAATCGATCGTGGCCTTTCCGAGCGCGTCGAACGATCCCGGCAACGC
GCTCATCATCCGCAATTCGCCGAAAGAGCAGCTCGTGATCGAGTCGGGCTCGAAGAACGTGACGATCGACGGCGTCTGGA
TCTACGCGAACCCGAAGCGCAACGCGAACGGCAACGATCTCGCGCCGAACACCGATGCGATCGACATCATCGGCACCCAG
ACCGCCCATGTTCGCAATTGCCTGCTCGACACCGGCGACGACGACATCGCCATCAAGTCCAACGCCGGCAGCGCGGCCAC
CAGCGATGTCGACATCAGCCACTGCGTGGTGGGCGGCGGCCACGGCATCTCGATCGGCGGCCAGGAGGCGGCGGGCCACA
CGCTCGCGAAACCCGGCGTCTCGCACGTGACGGTCGACACGGTGCAGTTCAGCGGCACCGACTTCGGCTACCGGATCAAG
ACCGACCAGACCGCCAAGGACAGCGGCGCGACCACCGGCGTGACCTACCGCAACACCTGCATGCGCAACGTCCAGCAGCC
GTTCCTGTTCACCTACACCTATGCCTCGGGCACGGGCGGCGACCTGCCGGTCATCGCGAACGTCAGCATCGACAACGTGA
TCGCCACCGCCACCAAGGCACAGGGCGCCATCATCGGCCTGCCGAACAGCCTGATCGGGGTGCCGAAATCGGGCGACACG
GGCATCCGCATCACCAACAGCCGGATCACCGGCGGCAAGCCGTTCGCGGTCAGCAACGGTGAACTGCAGGTGGGCAGCCA
CAGCATCGTGACCACCTCCAGCGGCACCAACGGCCAGGTGGTGCCGATCGCCGACACCGGCGCGACGCTCGCCTGCCCCG
CCTCCATCACCATTCCGGCGCAACGCTGA

Upstream 100 bases:

>100_bases
AGCACCGGGCACGCGCCGCCCGGCTGCCGCGCCTCGCGCGACGGCCGGCGGCGGGAGCCGAATCCGCTTTCCCCTTCCCC
ACTCGACAGCAAGGAACGAC

Downstream 100 bases:

>100_bases
GCGGCGCCGCGCCCGCTCGCCGCGCGCGCGGCGTCCCGCCGTGACGCCGCGCGCCGCTGCGCCCGATCTGCTCAAAAACG
GCACAGATGCGCTGATCGGG

Product: polygalacturonase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 462; Mature: 461

Protein sequence:

>462_residues
MTPRNRVRTSVTATFGALASLIAFAAPPAAHAASCATPQWSSSPAANTSALQSAINRCSGAAGNPGLIDLRANNGVSTAV
ITSVKLASNIVLKLEKGFTLKGSPGQPSDGAMLTGSGLSNVTLTGTGAIDGDGQSYWASAVGKNNTARPRLIKLTGSNLQ
IGSNFTDAGKPQSIVAFPSASNDPGNALIIRNSPKEQLVIESGSKNVTIDGVWIYANPKRNANGNDLAPNTDAIDIIGTQ
TAHVRNCLLDTGDDDIAIKSNAGSAATSDVDISHCVVGGGHGISIGGQEAAGHTLAKPGVSHVTVDTVQFSGTDFGYRIK
TDQTAKDSGATTGVTYRNTCMRNVQQPFLFTYTYASGTGGDLPVIANVSIDNVIATATKAQGAIIGLPNSLIGVPKSGDT
GIRITNSRITGGKPFAVSNGELQVGSHSIVTTSSGTNGQVVPIADTGATLACPASITIPAQR

Sequences:

>Translated_462_residues
MTPRNRVRTSVTATFGALASLIAFAAPPAAHAASCATPQWSSSPAANTSALQSAINRCSGAAGNPGLIDLRANNGVSTAV
ITSVKLASNIVLKLEKGFTLKGSPGQPSDGAMLTGSGLSNVTLTGTGAIDGDGQSYWASAVGKNNTARPRLIKLTGSNLQ
IGSNFTDAGKPQSIVAFPSASNDPGNALIIRNSPKEQLVIESGSKNVTIDGVWIYANPKRNANGNDLAPNTDAIDIIGTQ
TAHVRNCLLDTGDDDIAIKSNAGSAATSDVDISHCVVGGGHGISIGGQEAAGHTLAKPGVSHVTVDTVQFSGTDFGYRIK
TDQTAKDSGATTGVTYRNTCMRNVQQPFLFTYTYASGTGGDLPVIANVSIDNVIATATKAQGAIIGLPNSLIGVPKSGDT
GIRITNSRITGGKPFAVSNGELQVGSHSIVTTSSGTNGQVVPIADTGATLACPASITIPAQR
>Mature_461_residues
TPRNRVRTSVTATFGALASLIAFAAPPAAHAASCATPQWSSSPAANTSALQSAINRCSGAAGNPGLIDLRANNGVSTAVI
TSVKLASNIVLKLEKGFTLKGSPGQPSDGAMLTGSGLSNVTLTGTGAIDGDGQSYWASAVGKNNTARPRLIKLTGSNLQI
GSNFTDAGKPQSIVAFPSASNDPGNALIIRNSPKEQLVIESGSKNVTIDGVWIYANPKRNANGNDLAPNTDAIDIIGTQT
AHVRNCLLDTGDDDIAIKSNAGSAATSDVDISHCVVGGGHGISIGGQEAAGHTLAKPGVSHVTVDTVQFSGTDFGYRIKT
DQTAKDSGATTGVTYRNTCMRNVQQPFLFTYTYASGTGGDLPVIANVSIDNVIATATKAQGAIIGLPNSLIGVPKSGDTG
IRITNSRITGGKPFAVSNGELQVGSHSIVTTSSGTNGQVVPIADTGATLACPASITIPAQR

Specific function: Involved in maceration and soft-rotting of plant tissue [H]

COG id: COG5434

COG function: function code M; Endopolygalacturonase

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 28 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000743
- InterPro:   IPR006626
- InterPro:   IPR012334
- InterPro:   IPR011050 [H]

Pfam domain/function: PF00295 Glyco_hydro_28 [H]

EC number: =3.2.1.15 [H]

Molecular weight: Translated: 46837; Mature: 46706

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: PS00147 ARGINASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPRNRVRTSVTATFGALASLIAFAAPPAAHAASCATPQWSSSPAANTSALQSAINRCSG
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCC
AAGNPGLIDLRANNGVSTAVITSVKLASNIVLKLEKGFTLKGSPGQPSDGAMLTGSGLSN
CCCCCCEEEEECCCCCCEEEEEEEECCCEEEEEEECCEEEECCCCCCCCCCEEECCCCCE
VTLTGTGAIDGDGQSYWASAVGKNNTARPRLIKLTGSNLQIGSNFTDAGKPQSIVAFPSA
EEEEECCCCCCCCHHHHHHHHCCCCCCCCEEEEEECCCEEECCCCCCCCCCCEEEEECCC
SNDPGNALIIRNSPKEQLVIESGSKNVTIDGVWIYANPKRNANGNDLAPNTDAIDIIGTQ
CCCCCCEEEEECCCCCEEEEECCCCEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEECC
TAHVRNCLLDTGDDDIAIKSNAGSAATSDVDISHCVVGGGHGISIGGQEAAGHTLAKPGV
HHHHHHHHCCCCCCCEEEECCCCCCCCCCCCEEEEEEECCCEEECCCCHHCCCCCCCCCC
SHVTVDTVQFSGTDFGYRIKTDQTAKDSGATTGVTYRNTCMRNVQQPFLFTYTYASGTGG
CEEEEEEEEECCCCCCEEEECCCCCCCCCCCCCEEEHHHHHHHCCCCEEEEEEECCCCCC
DLPVIANVSIDNVIATATKAQGAIIGLPNSLIGVPKSGDTGIRITNSRITGGKPFAVSNG
CCCEEEECCCCCEEEEECCCCCEEEECCHHHEECCCCCCCCEEEECCEECCCCCEEEECC
ELQVGSHSIVTTSSGTNGQVVPIADTGATLACPASITIPAQR
EEEECCEEEEEECCCCCCEEEEEECCCCEEECCCEEEECCCC
>Mature Secondary Structure 
TPRNRVRTSVTATFGALASLIAFAAPPAAHAASCATPQWSSSPAANTSALQSAINRCSG
CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCC
AAGNPGLIDLRANNGVSTAVITSVKLASNIVLKLEKGFTLKGSPGQPSDGAMLTGSGLSN
CCCCCCEEEEECCCCCCEEEEEEEECCCEEEEEEECCEEEECCCCCCCCCCEEECCCCCE
VTLTGTGAIDGDGQSYWASAVGKNNTARPRLIKLTGSNLQIGSNFTDAGKPQSIVAFPSA
EEEEECCCCCCCCHHHHHHHHCCCCCCCCEEEEEECCCEEECCCCCCCCCCCEEEEECCC
SNDPGNALIIRNSPKEQLVIESGSKNVTIDGVWIYANPKRNANGNDLAPNTDAIDIIGTQ
CCCCCCEEEEECCCCCEEEEECCCCEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEECC
TAHVRNCLLDTGDDDIAIKSNAGSAATSDVDISHCVVGGGHGISIGGQEAAGHTLAKPGV
HHHHHHHHCCCCCCCEEEECCCCCCCCCCCCEEEEEEECCCEEECCCCHHCCCCCCCCCC
SHVTVDTVQFSGTDFGYRIKTDQTAKDSGATTGVTYRNTCMRNVQQPFLFTYTYASGTGG
CEEEEEEEEECCCCCCEEEECCCCCCCCCCCCCEEEHHHHHHHCCCCEEEEEEECCCCCC
DLPVIANVSIDNVIATATKAQGAIIGLPNSLIGVPKSGDTGIRITNSRITGGKPFAVSNG
CCCEEEECCCCCEEEEECCCCCEEEECCHHHEECCCCCCCCEEEECCEECCCCCEEEECC
ELQVGSHSIVTTSSGTNGQVVPIADTGATLACPASITIPAQR
EEEECCEEEEEECCCCCCEEEEEECCCCEEECCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2215211; 8074530; 8407675 [H]