| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is iagB [H]
Identifier: 238024132
GI number: 238024132
Start: 835606
End: 836808
Strand: Reverse
Name: iagB [H]
Synonym: bglu_2g07070
Alternate gene names: 238024132
Gene position: 836808-835606 (Counterclockwise)
Preceding gene: 238024137
Following gene: 238024131
Centisome position: 29.6
GC content: 70.74
Gene sequence:
>1203_bases ATGGCCATGCGATACCGGAAAATTGCGCTCCGCGGAGTCGCGCCGCTTTGTCTCGGCGCGCTGGTCGCGATCGTACTGGG CCGTCCGGGCATCGCGCGGGCCGACTGCATCGACGAGGCCGCCGCGTTCCAGCACGTGAACGTGGGCCTGATGCGTGCGA TCGCGCAGGTCGAATCGGGCACCCGCACCAACGTGATCAACCCGAACAGCAACGGCACGTTCGACATCGGCCTGATGCAG ATAAACAGTTCGTGGCTGCCGCGCCTCGCGCGCGAGGGCATCACCGAGCAGAGCCTGTTCGATCCCTGCACCAACGCCTA TGTCGGCGCCTGGATCCTCTCCGAAAACATTCGCCAATTCGGACCGACCTGGAACGCGATCGGCGCGTACAACGCGAGCG CGCCCGACAAGCGGCTCGCCTACGCACGCAAGGTCTACGACGCGGCCCAGTCGATCATCAGCACAGCGGACTCCCCGATG CCCATTCTCCCGCCCTCCTTCATACCGCCGCAGACCTACAACCCGTTCGCGAGCCTCGAGGTCAACCAGGTCAGGCTGGC GGCGCCGCGGGCCGCGAACGCACCGGCGGCGGCTCCCGCCGGCGCGCCGCCGTCCCCGGCGATTTCAGCGGCGGCGCCCG GCCAGTACAACTTCGGCTGGGACATCAGCGGCGCGCCCGAGGTCAAACCGGTGCAGGTGTTCGACGATGGCAAGCGGATC TACGCGCAGTTCAGCGACATGAAGCGGGTGCCGGCGATCTTCGCCGACACGCCGCACGGCCGCGCGGTGCTGCGCTGGGA ATCGCAGCCGCCCTATGCGGTGATCTCGTCGCTCGAGCCTTCGCTGATCTTCCAGCTCGGCGGCGCCGAGGCCAAGGCCC AGCGCCGGCCGAACAACGCGCCGCTGCCGCCGGGCATGCAGGCGGCGGCCTCCGCCGCGGCCGCGGCCGGCGCCGCGGCG TCCAAGTCGCGCGGCGCCGGGGCGGTGGGCACCGATGCGCTCTGGTACGTGTCGACCCCGACGACGGTGCCGGGGCCGAC GAAGCTGCCCAACGTCGAGTCACCGGCCAATTCAGCCGCCACGTTCGCCACGGCGCAGACCGGGCCGGCGCCGGCAGCCG CGCCCGCCGCCCCGGCGCCCGCCAGGAAGTCGGCCGCCGATGCGCGCAACAGCACCAGCGCGCTCTGGTACCTGACGAAA TAG
Upstream 100 bases:
>100_bases CGGACACGCCATCCCGGGCTTGGGATTTTTTCCAAGCCGGGTAAAATGCCGCTGTTTTCTTGCTGCCTCCCCCAAAGCCG TCGTCTCAACCAGAAAAACC
Downstream 100 bases:
>100_bases CATTTCCCCCGCCCCTCACCCGCCACACCCACCACCCCACCCCCACCCCACACGCGCCGCCACGCGCGGCGCCGCGGCGG CGGCGCCGTGCCGATGCCCG
Product: lytic transglycosylase catalytic subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 400; Mature: 399
Protein sequence:
>400_residues MAMRYRKIALRGVAPLCLGALVAIVLGRPGIARADCIDEAAAFQHVNVGLMRAIAQVESGTRTNVINPNSNGTFDIGLMQ INSSWLPRLAREGITEQSLFDPCTNAYVGAWILSENIRQFGPTWNAIGAYNASAPDKRLAYARKVYDAAQSIISTADSPM PILPPSFIPPQTYNPFASLEVNQVRLAAPRAANAPAAAPAGAPPSPAISAAAPGQYNFGWDISGAPEVKPVQVFDDGKRI YAQFSDMKRVPAIFADTPHGRAVLRWESQPPYAVISSLEPSLIFQLGGAEAKAQRRPNNAPLPPGMQAAASAAAAAGAAA SKSRGAGAVGTDALWYVSTPTTVPGPTKLPNVESPANSAATFATAQTGPAPAAAPAAPAPARKSAADARNSTSALWYLTK
Sequences:
>Translated_400_residues MAMRYRKIALRGVAPLCLGALVAIVLGRPGIARADCIDEAAAFQHVNVGLMRAIAQVESGTRTNVINPNSNGTFDIGLMQ INSSWLPRLAREGITEQSLFDPCTNAYVGAWILSENIRQFGPTWNAIGAYNASAPDKRLAYARKVYDAAQSIISTADSPM PILPPSFIPPQTYNPFASLEVNQVRLAAPRAANAPAAAPAGAPPSPAISAAAPGQYNFGWDISGAPEVKPVQVFDDGKRI YAQFSDMKRVPAIFADTPHGRAVLRWESQPPYAVISSLEPSLIFQLGGAEAKAQRRPNNAPLPPGMQAAASAAAAAGAAA SKSRGAGAVGTDALWYVSTPTTVPGPTKLPNVESPANSAATFATAQTGPAPAAAPAAPAPARKSAADARNSTSALWYLTK >Mature_399_residues AMRYRKIALRGVAPLCLGALVAIVLGRPGIARADCIDEAAAFQHVNVGLMRAIAQVESGTRTNVINPNSNGTFDIGLMQI NSSWLPRLAREGITEQSLFDPCTNAYVGAWILSENIRQFGPTWNAIGAYNASAPDKRLAYARKVYDAAQSIISTADSPMP ILPPSFIPPQTYNPFASLEVNQVRLAAPRAANAPAAAPAGAPPSPAISAAAPGQYNFGWDISGAPEVKPVQVFDDGKRIY AQFSDMKRVPAIFADTPHGRAVLRWESQPPYAVISSLEPSLIFQLGGAEAKAQRRPNNAPLPPGMQAAASAAAAAGAAAS KSRGAGAVGTDALWYVSTPTTVPGPTKLPNVESPANSAATFATAQTGPAPAAAPAAPAPARKSAADARNSTSALWYLTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iagB/ipgF/P19 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008258 [H]
Pfam domain/function: PF01464 SLT [H]
EC number: NA
Molecular weight: Translated: 41676; Mature: 41544
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMRYRKIALRGVAPLCLGALVAIVLGRPGIARADCIDEAAAFQHVNVGLMRAIAQVESG CCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC TRTNVINPNSNGTFDIGLMQINSSWLPRLAREGITEQSLFDPCTNAYVGAWILSENIRQF CCCCEECCCCCCEEEEEEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH GPTWNAIGAYNASAPDKRLAYARKVYDAAQSIISTADSPMPILPPSFIPPQTYNPFASLE CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEE VNQVRLAAPRAANAPAAAPAGAPPSPAISAAAPGQYNFGWDISGAPEVKPVQVFDDGKRI ECEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHH YAQFSDMKRVPAIFADTPHGRAVLRWESQPPYAVISSLEPSLIFQLGGAEAKAQRRPNNA HHHHHHHHHCCEEEECCCCCCEEEEECCCCCHHHHHCCCCEEEEEECCCHHHHHCCCCCC PLPPGMQAAASAAAAAGAAASKSRGAGAVGTDALWYVSTPTTVPGPTKLPNVESPANSAA CCCCCHHHHHHHHHHHCCHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC TFATAQTGPAPAAAPAAPAPARKSAADARNSTSALWYLTK EEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEEC >Mature Secondary Structure AMRYRKIALRGVAPLCLGALVAIVLGRPGIARADCIDEAAAFQHVNVGLMRAIAQVESG CCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC TRTNVINPNSNGTFDIGLMQINSSWLPRLAREGITEQSLFDPCTNAYVGAWILSENIRQF CCCCEECCCCCCEEEEEEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH GPTWNAIGAYNASAPDKRLAYARKVYDAAQSIISTADSPMPILPPSFIPPQTYNPFASLE CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEE VNQVRLAAPRAANAPAAAPAGAPPSPAISAAAPGQYNFGWDISGAPEVKPVQVFDDGKRI ECEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHH YAQFSDMKRVPAIFADTPHGRAVLRWESQPPYAVISSLEPSLIFQLGGAEAKAQRRPNNA HHHHHHHHHCCEEEECCCCCCEEEEECCCCCHHHHHCCCCEEEEEECCCHHHHHCCCCCC PLPPGMQAAASAAAAAGAAASKSRGAGAVGTDALWYVSTPTTVPGPTKLPNVESPANSAA CCCCCHHHHHHHHHHHCCHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC TFATAQTGPAPAAAPAAPAPARKSAADARNSTSALWYLTK EEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7754225; 11677608; 12644504 [H]