| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024098
Identifier: 238024098
GI number: 238024098
Start: 795872
End: 797602
Strand: Direct
Name: 238024098
Synonym: bglu_2g06660
Alternate gene names: NA
Gene position: 795872-797602 (Clockwise)
Preceding gene: 238024097
Following gene: 238024099
Centisome position: 28.15
GC content: 53.73
Gene sequence:
>1731_bases ATGAACGACAAGACGCGGACCGTAGCGCGCAGCTACGACGAAGACGGACTACCGGTCTGGCATTCGCAGACATCGCCAAC GAGTATGACAACTCGTGCGGAATGTCTGATGCATCCAGATCGGATCATTCCGGTGATCTTTGTCCCCGGCATCATGGGTT CGAATCTGAAGTCGAAAGACGTCACGCGATCGAAAAAGATCGTCAATATCTGGCGGCCGGATCTCACGGGAGCAGTGACA AAGATTATTGGACTGAGCCCTGCCGGAAGAAAAACGGTCTTTAATCCTGAAAACGTGCAGGTGGATCGCGACATCGATGT TAACGGCCAACGCTTGGCAAATGCAACTAATGGTTTTCCAGCTAAGCTTATTCAGGCCCGTGGTTGGGGAACTATTTTCT GGGGAAGCTATGGCCCTCTACTCGAGTATCTTGAATCGAATTTGAACGATGTCTTGCGATGGGATTCGGCCAAGAATGAG ACCATCGTTGGTGAGTCGTGGACGCCCTACATATCACATGGCGTTGCCGTCAAATCGGATGGCAAGGAGCATATTCTTCG GTTGACGAAGGGTGAGTTGGAGCAGGTTGCAAAGTACTGGTATCCCGTGCATGCAGCAGGGTACAACTGGCTTCAATCAA ATGAGCAATCTGGAAAAGACCTGGCGCGGGAAGTTGACGTTATTCTCAATCATTATCGGGACAAGTGGGGCAGTAAAGCA GTTCAAAAGGTGATTTTAGTAACCCACTCGATGGGAGGCTTGGTAGCGCGGGCAGCGGTTCATCCGAAGATGGGTAACGC TTCAGACAAGGTGCTGGGCATTCTCCATGGAGCCATGCCTGCTCGCGGAGCGCCGGCGGCCTACAAGCGCATGCGGGCTG GCAATGAGGCGGGCGGATTTTCTATCAACCCGATCACGGTTTTGAAGTCGATAGCAACATGGATGTTCCTTGGTGCATAT GGCCCAGATGTGGCGCCCGTTCTAGGCCAGTCTCCTGGAGGGTTGCAGTTACTCCCGAACCAAAATTATCCGACTGGATG GCTCACTGTTAGAGCGGGCGGCGTCAGCTATCCGATCGAGGGCAATCCCTACAAAACGATCTATAGTGAACGTAGTCGGT GGTGGCGGCTCGTAAATCCAGATTGGCTAGATCCGGGCGGCGACTCTGGCGTGCGATATGACGAATCCGGGGCGGTGGTT ACCAAAACTGATCCTGCATGGGCAAAATATATGGTCTGTTTGTCTAGCGCAGAGCAGTTTCATGCGTCACTAGGTGACTA CTACCACCCTGTGACCTACGCGTTCTTTGGCTCCGACACCGAGCACAAGGCATGGGGTAAGATCCAGTGGGACATTGGGA CATTACGTTTCGCGATGCGAGGGCCCATGTCTGTCTTCGATAGTAACGCGGAGCTGAAGAAACTTGCGATGGACGGATTG CCGACGAGCGACAATGGTAGCGGGACAATGGAAGCGAGGGCGGTGGACTCGTCGTGGATGGGTGATCTACGGGACCGTTT TTCTATCCGCGATCCAGAATCGCCCGGTGATGGCACCGTGCCGCACGAATCGGGCCGAGCGCCGGGGAAACGTGGTGGCG CAATCGAACAATTCGCGTTTGATGGGTTCGATCATCAAAGTGCATACCTTCCGGAGATGGCTAACGTGATGGCTGTCACA AAATATGCGGTTGCGAAGATCGCCAAAAGGGCAGACTGGGGTGACGTTTGA
Upstream 100 bases:
>100_bases CCGTGATCACCGGCCGGACCAACGCAAACGGTGGAACTGGCATACAGAAGAGTTCAATGATCGAGAGGATGCGCCTCAAA TTTTTGCCCGAGGGTAAGGG
Downstream 100 bases:
>100_bases GAGCTAACGCATACATCAAGATCATTTTTACAATCGCTCTTGTTCAACTCGCAGCCTGCAATCGCCATCAGGATTCGAGC ATGAGTAACCTATCCCAATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 576; Mature: 576
Protein sequence:
>576_residues MNDKTRTVARSYDEDGLPVWHSQTSPTSMTTRAECLMHPDRIIPVIFVPGIMGSNLKSKDVTRSKKIVNIWRPDLTGAVT KIIGLSPAGRKTVFNPENVQVDRDIDVNGQRLANATNGFPAKLIQARGWGTIFWGSYGPLLEYLESNLNDVLRWDSAKNE TIVGESWTPYISHGVAVKSDGKEHILRLTKGELEQVAKYWYPVHAAGYNWLQSNEQSGKDLAREVDVILNHYRDKWGSKA VQKVILVTHSMGGLVARAAVHPKMGNASDKVLGILHGAMPARGAPAAYKRMRAGNEAGGFSINPITVLKSIATWMFLGAY GPDVAPVLGQSPGGLQLLPNQNYPTGWLTVRAGGVSYPIEGNPYKTIYSERSRWWRLVNPDWLDPGGDSGVRYDESGAVV TKTDPAWAKYMVCLSSAEQFHASLGDYYHPVTYAFFGSDTEHKAWGKIQWDIGTLRFAMRGPMSVFDSNAELKKLAMDGL PTSDNGSGTMEARAVDSSWMGDLRDRFSIRDPESPGDGTVPHESGRAPGKRGGAIEQFAFDGFDHQSAYLPEMANVMAVT KYAVAKIAKRADWGDV
Sequences:
>Translated_576_residues MNDKTRTVARSYDEDGLPVWHSQTSPTSMTTRAECLMHPDRIIPVIFVPGIMGSNLKSKDVTRSKKIVNIWRPDLTGAVT KIIGLSPAGRKTVFNPENVQVDRDIDVNGQRLANATNGFPAKLIQARGWGTIFWGSYGPLLEYLESNLNDVLRWDSAKNE TIVGESWTPYISHGVAVKSDGKEHILRLTKGELEQVAKYWYPVHAAGYNWLQSNEQSGKDLAREVDVILNHYRDKWGSKA VQKVILVTHSMGGLVARAAVHPKMGNASDKVLGILHGAMPARGAPAAYKRMRAGNEAGGFSINPITVLKSIATWMFLGAY GPDVAPVLGQSPGGLQLLPNQNYPTGWLTVRAGGVSYPIEGNPYKTIYSERSRWWRLVNPDWLDPGGDSGVRYDESGAVV TKTDPAWAKYMVCLSSAEQFHASLGDYYHPVTYAFFGSDTEHKAWGKIQWDIGTLRFAMRGPMSVFDSNAELKKLAMDGL PTSDNGSGTMEARAVDSSWMGDLRDRFSIRDPESPGDGTVPHESGRAPGKRGGAIEQFAFDGFDHQSAYLPEMANVMAVT KYAVAKIAKRADWGDV >Mature_576_residues MNDKTRTVARSYDEDGLPVWHSQTSPTSMTTRAECLMHPDRIIPVIFVPGIMGSNLKSKDVTRSKKIVNIWRPDLTGAVT KIIGLSPAGRKTVFNPENVQVDRDIDVNGQRLANATNGFPAKLIQARGWGTIFWGSYGPLLEYLESNLNDVLRWDSAKNE TIVGESWTPYISHGVAVKSDGKEHILRLTKGELEQVAKYWYPVHAAGYNWLQSNEQSGKDLAREVDVILNHYRDKWGSKA VQKVILVTHSMGGLVARAAVHPKMGNASDKVLGILHGAMPARGAPAAYKRMRAGNEAGGFSINPITVLKSIATWMFLGAY GPDVAPVLGQSPGGLQLLPNQNYPTGWLTVRAGGVSYPIEGNPYKTIYSERSRWWRLVNPDWLDPGGDSGVRYDESGAVV TKTDPAWAKYMVCLSSAEQFHASLGDYYHPVTYAFFGSDTEHKAWGKIQWDIGTLRFAMRGPMSVFDSNAELKKLAMDGL PTSDNGSGTMEARAVDSSWMGDLRDRFSIRDPESPGDGTVPHESGRAPGKRGGAIEQFAFDGFDHQSAYLPEMANVMAVT KYAVAKIAKRADWGDV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63306; Mature: 63306
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDKTRTVARSYDEDGLPVWHSQTSPTSMTTRAECLMHPDRIIPVIFVPGIMGSNLKSKD CCCHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCH VTRSKKIVNIWRPDLTGAVTKIIGLSPAGRKTVFNPENVQVDRDIDVNGQRLANATNGFP HHHCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCHHHHCCCCCCH AKLIQARGWGTIFWGSYGPLLEYLESNLNDVLRWDSAKNETIVGESWTPYISHGVAVKSD HHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHCCEEEECC GKEHILRLTKGELEQVAKYWYPVHAAGYNWLQSNEQSGKDLAREVDVILNHYRDKWGSKA CHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH VQKVILVTHSMGGLVARAAVHPKMGNASDKVLGILHGAMPARGAPAAYKRMRAGNEAGGF HHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCE SINPITVLKSIATWMFLGAYGPDVAPVLGQSPGGLQLLPNQNYPTGWLTVRAGGVSYPIE ECCHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCEEECCCCCCCCCEEEEEECCEECCCC GNPYKTIYSERSRWWRLVNPDWLDPGGDSGVRYDESGAVVTKTDPAWAKYMVCLSSAEQF CCCHHHHHHCCCCEEEECCCCCCCCCCCCCCEECCCCCEEEECCHHHHHHHHHHHHHHHH HASLGDYYHPVTYAFFGSDTEHKAWGKIQWDIGTLRFAMRGPMSVFDSNAELKKLAMDGL HHHHCCHHCCEEEEEECCCCCCCCCCEEEEEHHHEEHHHCCCHHHHCCCHHHHHHHHCCC PTSDNGSGTMEARAVDSSWMGDLRDRFSIRDPESPGDGTVPHESGRAPGKRGGAIEQFAF CCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHC DGFDHQSAYLPEMANVMAVTKYAVAKIAKRADWGDV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNDKTRTVARSYDEDGLPVWHSQTSPTSMTTRAECLMHPDRIIPVIFVPGIMGSNLKSKD CCCHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCH VTRSKKIVNIWRPDLTGAVTKIIGLSPAGRKTVFNPENVQVDRDIDVNGQRLANATNGFP HHHCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCHHHHCCCCCCH AKLIQARGWGTIFWGSYGPLLEYLESNLNDVLRWDSAKNETIVGESWTPYISHGVAVKSD HHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHCCEEEECC GKEHILRLTKGELEQVAKYWYPVHAAGYNWLQSNEQSGKDLAREVDVILNHYRDKWGSKA CHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH VQKVILVTHSMGGLVARAAVHPKMGNASDKVLGILHGAMPARGAPAAYKRMRAGNEAGGF HHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCE SINPITVLKSIATWMFLGAYGPDVAPVLGQSPGGLQLLPNQNYPTGWLTVRAGGVSYPIE ECCHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCEEECCCCCCCCCEEEEEECCEECCCC GNPYKTIYSERSRWWRLVNPDWLDPGGDSGVRYDESGAVVTKTDPAWAKYMVCLSSAEQF CCCHHHHHHCCCCEEEECCCCCCCCCCCCCCEECCCCCEEEECCHHHHHHHHHHHHHHHH HASLGDYYHPVTYAFFGSDTEHKAWGKIQWDIGTLRFAMRGPMSVFDSNAELKKLAMDGL HHHHCCHHCCEEEEEECCCCCCCCCCEEEEEHHHEEHHHCCCHHHHCCCHHHHHHHHCCC PTSDNGSGTMEARAVDSSWMGDLRDRFSIRDPESPGDGTVPHESGRAPGKRGGAIEQFAF CCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHC DGFDHQSAYLPEMANVMAVTKYAVAKIAKRADWGDV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA