Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is 238024097

Identifier: 238024097

GI number: 238024097

Start: 793197

End: 795875

Strand: Direct

Name: 238024097

Synonym: bglu_2g06650

Alternate gene names: NA

Gene position: 793197-795875 (Clockwise)

Preceding gene: 238024095

Following gene: 238024098

Centisome position: 28.05

GC content: 57.15

Gene sequence:

>2679_bases
ATGAACTTGACTGAATTGATTCAGGCGCTTCGCGGCGGGCTGATCCAGCAAGACAGGCTATTGAAAGCTGACATTCCAGC
GTTGCCGGAAAACGCGCTGCTGCCGCGTCGCGCGGTAAGTTACTCTGAGTTGGGTCGCGACTTCAGCGTTACTCTCGATA
TGGTGTCGACGGCCAGTGATATCGAGTTGAAAACGCTGATTGCGCAGTCGATGACGCTTTGGATATTGCAGGCCGACAAG
TCCTATTTGCCGATCAACGGCTACATCCACACGGCTCGCCGACTCGGCGCGGAAGGCAGCCAGGCAAGCTATCAGCTGAC
GTTCGCTTCCTGGATGCACTTCCTCAAATATCGTCGCGACATGCGGTATTGGCAAGATCGAAGCGTCGACGCGATCATCG
CCGATGTGTTCAACGCTCATCCGCAGGCGAGAGGGCAGTTCCAGTTTGCACTGTCGAAGCCGCTGCCATCGCGGTCCTAT
TGTCGTCAAAGCGAATCCGACTGGAACTTTGTCCATCGGTTGATGGAAGAGGAAGGTCTGTTCGGTTTCTGGCGGCAGAA
CAAGGATGGTAAATCGCATACGTTGGTAGTGACCGACGACGTTCACTCGCTCGATCAGATACAAAGCAATCCTGTCGAGT
TTTACAGAGCCGACGCTGGCAGCGAAGTGGATGCGTTCACGCAGTGGGCGGGTTCTCGGACATTGCAGAGTTCGGTACAT
ACAACCCGCACATTTGACTACAAGGCGCCATCACTGGGTGCCAATTCCAAGGGCACGACACTGCCGACCATGGTTGGCCA
GGGAAATCTGCCCGAACAGACTGAGGTCTACGAGTACACGGGGGCCTACACCTACGATCGACAGGACCGAGGCGAGCATC
TTTCCAAAGTCCATCTGGAGGAGTGGGAATCACGCGCCAAACGTTTCACCGGAGCGGGTGGCGTGCGTGGCATCGATGCG
GGTTTGCGGTTCGAACTGAGCGGCCACCCGGAGCATGACCGCGATCCTGCCGGCCAGCGAGAGTTTGCTGCGCTCAAGGT
ATGGCGCTACATCGAAAACAATCTTCCACTGTCGGATCAGGAAGCCAGTTTCCCGCACAGCTTGCGGGAAGAGTTGGCCC
GGTCAAAATCGAAATTCTCAGGCGTCGACGTCAAACACGACGATGGTTCGGCGGGCTTCTATTTGGTCGAAGTCGAGGCG
CAACGTACCACGGTCCCGTATCGTTGTCCGTTCGAACACAAGAAGCCGGAGATGCACCTCGAGACGGCAATCGTCGTCGG
CCCGCAAGGCGAAGAGGTATACACGGACGAACTGAACCGCGTGAAGGTGATGTTCATCTGGGACCGACAGAATCAGGGTG
ACGCGGGTGCTTCGTGCTGGGTTCGAGTGGCGCAGTTGGATACGGGCGGCGGTTACGGCGGTGTCCATATGCCCCGCGTC
GGGGAAGAGGTACTGGTCGGTTATCTAGGTGGTGATTGCGATAGACCGATCGTCCTGCATCGCGTCTACAACGGAAAAGT
TAGGCCGCAGTGGCACAGCAACGGCATTCTGTCCGGGAACCGCTCCAAGGAATACGGCGGCAGCGGCTACAACCAGATGG
TGATGGACGACGCGACCGGGCAGAACCGGGTCCAACTGATGAGCAGCAGCGCGAACAGCATGCTGCATTTGGGTTATCTG
ATCGACCAGAGCGGCAACACACGAGGTTCGTATCTTGGATCAGGCTTCGATTTGCGGTCGGATGCCTACGGTGCGGTTCG
CGCGTCCCAAGGTCTATATCTGACTACCCATTCCAAGTCGGCGAGCAGCCAACCCCTGGATGTACGCGAGGCCCAGGAAC
AACTCATCAATGCCGAAAGCGTGATCGAGGCGATGTCGCAGGCGAGCCAAACGCATCAGGCGGAAAGCCTGGATGAAGGC
CACAAGGCGCTCAAAACCTTTACCGATGCGACCCAGAATAGTGTGCAGGGAACATCGTCGGGCGGCACAACCGCGGGGGG
CGGTACGGGCAGCGCGAATGTTTTCAAATCGCCGGTCATGTTGATTGCGGCCCCTGCCGGTATCGCCTTGTCGACGCAGG
ATTCCGTGCATGTGTCGAGCGAGCATCAAACGAACATCGTCGGTGGCCAGAGCACGTTCATCACGAGTGGCAAGTCGCTG
GTCGCAAGTGTCGCGGAGAAGATCAGCCTATTCGTGCAGAACGCCGGGATGAAGCTGTTTGCCGCGAAAGGAAAGGTTGA
GATCCAGGCGCATGCAGACAATGTCGAAGTCGCCGCGCAGAAATCCGTGAAGGTGCTGGCGGCAACAGAGAGCGTCGAGG
CCATTGCAAAACAGGAAATCCTGTTAACGTCCGGCGGTGCGTACATTCGCCTTTCGGGCGGCAACATCGAGATCCATGCC
CCCGGCAAGATCGATATCAAGGGTGCCACACATAATTTCTCTGGGCCGACTTCCTTGTCGAAATCAATGAACGAATGGCC
CAACATGCCGCACGACGAAGAGTTCATACTTCGTCATCACGCGACCGGGCAACCGATGGCGAACCGGCGCTTTGAATTAA
CCCGAGCAGATGGTTCCGTGATCACCGGCCGGACCAACGCAAACGGTGGAACTGGCATACAGAAGAGTTCAATGATCGAG
AGGATGCGCCTCAAATTTTTGCCCGAGGGTAAGGGATGA

Upstream 100 bases:

>100_bases
TGGTCCTAGTGGCTGTCCTCCCCTAGATTAATAAGGGACGGCCGTCCCTGCGAGAGAGTAGGTCCACACGATCTACTATG
AACACGACCAAAGGCAGCAC

Downstream 100 bases:

>100_bases
ACGACAAGACGCGGACCGTAGCGCGCAGCTACGACGAAGACGGACTACCGGTCTGGCATTCGCAGACATCGCCAACGAGT
ATGACAACTCGTGCGGAATG

Product: Rhs element Vgr protein

Products: NA

Alternate protein names: Type VI Secretion System Vgr Family Protein; VGR-Related Protein; Rhs Element Vgr Family Protein; Vgr-Related Protein; Rhs-Family Protein; Rhs Element Vgr Family; VGR-Like Protein; VgrG Protein; VGR-Related Type VI Secretion System Protein; Vgr Related Protein; Rhs Element Vgr Related Protein; Replication/Virulence Associated Protein; Conserved Hypothethical Protein; Type VI Secretion System VgrG Family Protein; Rhs Family Protein; Rhs Element Vgr-Related Protein; VgrG Family T6SS G

Number of amino acids: Translated: 892; Mature: 892

Protein sequence:

>892_residues
MNLTELIQALRGGLIQQDRLLKADIPALPENALLPRRAVSYSELGRDFSVTLDMVSTASDIELKTLIAQSMTLWILQADK
SYLPINGYIHTARRLGAEGSQASYQLTFASWMHFLKYRRDMRYWQDRSVDAIIADVFNAHPQARGQFQFALSKPLPSRSY
CRQSESDWNFVHRLMEEEGLFGFWRQNKDGKSHTLVVTDDVHSLDQIQSNPVEFYRADAGSEVDAFTQWAGSRTLQSSVH
TTRTFDYKAPSLGANSKGTTLPTMVGQGNLPEQTEVYEYTGAYTYDRQDRGEHLSKVHLEEWESRAKRFTGAGGVRGIDA
GLRFELSGHPEHDRDPAGQREFAALKVWRYIENNLPLSDQEASFPHSLREELARSKSKFSGVDVKHDDGSAGFYLVEVEA
QRTTVPYRCPFEHKKPEMHLETAIVVGPQGEEVYTDELNRVKVMFIWDRQNQGDAGASCWVRVAQLDTGGGYGGVHMPRV
GEEVLVGYLGGDCDRPIVLHRVYNGKVRPQWHSNGILSGNRSKEYGGSGYNQMVMDDATGQNRVQLMSSSANSMLHLGYL
IDQSGNTRGSYLGSGFDLRSDAYGAVRASQGLYLTTHSKSASSQPLDVREAQEQLINAESVIEAMSQASQTHQAESLDEG
HKALKTFTDATQNSVQGTSSGGTTAGGGTGSANVFKSPVMLIAAPAGIALSTQDSVHVSSEHQTNIVGGQSTFITSGKSL
VASVAEKISLFVQNAGMKLFAAKGKVEIQAHADNVEVAAQKSVKVLAATESVEAIAKQEILLTSGGAYIRLSGGNIEIHA
PGKIDIKGATHNFSGPTSLSKSMNEWPNMPHDEEFILRHHATGQPMANRRFELTRADGSVITGRTNANGGTGIQKSSMIE
RMRLKFLPEGKG

Sequences:

>Translated_892_residues
MNLTELIQALRGGLIQQDRLLKADIPALPENALLPRRAVSYSELGRDFSVTLDMVSTASDIELKTLIAQSMTLWILQADK
SYLPINGYIHTARRLGAEGSQASYQLTFASWMHFLKYRRDMRYWQDRSVDAIIADVFNAHPQARGQFQFALSKPLPSRSY
CRQSESDWNFVHRLMEEEGLFGFWRQNKDGKSHTLVVTDDVHSLDQIQSNPVEFYRADAGSEVDAFTQWAGSRTLQSSVH
TTRTFDYKAPSLGANSKGTTLPTMVGQGNLPEQTEVYEYTGAYTYDRQDRGEHLSKVHLEEWESRAKRFTGAGGVRGIDA
GLRFELSGHPEHDRDPAGQREFAALKVWRYIENNLPLSDQEASFPHSLREELARSKSKFSGVDVKHDDGSAGFYLVEVEA
QRTTVPYRCPFEHKKPEMHLETAIVVGPQGEEVYTDELNRVKVMFIWDRQNQGDAGASCWVRVAQLDTGGGYGGVHMPRV
GEEVLVGYLGGDCDRPIVLHRVYNGKVRPQWHSNGILSGNRSKEYGGSGYNQMVMDDATGQNRVQLMSSSANSMLHLGYL
IDQSGNTRGSYLGSGFDLRSDAYGAVRASQGLYLTTHSKSASSQPLDVREAQEQLINAESVIEAMSQASQTHQAESLDEG
HKALKTFTDATQNSVQGTSSGGTTAGGGTGSANVFKSPVMLIAAPAGIALSTQDSVHVSSEHQTNIVGGQSTFITSGKSL
VASVAEKISLFVQNAGMKLFAAKGKVEIQAHADNVEVAAQKSVKVLAATESVEAIAKQEILLTSGGAYIRLSGGNIEIHA
PGKIDIKGATHNFSGPTSLSKSMNEWPNMPHDEEFILRHHATGQPMANRRFELTRADGSVITGRTNANGGTGIQKSSMIE
RMRLKFLPEGKG
>Mature_892_residues
MNLTELIQALRGGLIQQDRLLKADIPALPENALLPRRAVSYSELGRDFSVTLDMVSTASDIELKTLIAQSMTLWILQADK
SYLPINGYIHTARRLGAEGSQASYQLTFASWMHFLKYRRDMRYWQDRSVDAIIADVFNAHPQARGQFQFALSKPLPSRSY
CRQSESDWNFVHRLMEEEGLFGFWRQNKDGKSHTLVVTDDVHSLDQIQSNPVEFYRADAGSEVDAFTQWAGSRTLQSSVH
TTRTFDYKAPSLGANSKGTTLPTMVGQGNLPEQTEVYEYTGAYTYDRQDRGEHLSKVHLEEWESRAKRFTGAGGVRGIDA
GLRFELSGHPEHDRDPAGQREFAALKVWRYIENNLPLSDQEASFPHSLREELARSKSKFSGVDVKHDDGSAGFYLVEVEA
QRTTVPYRCPFEHKKPEMHLETAIVVGPQGEEVYTDELNRVKVMFIWDRQNQGDAGASCWVRVAQLDTGGGYGGVHMPRV
GEEVLVGYLGGDCDRPIVLHRVYNGKVRPQWHSNGILSGNRSKEYGGSGYNQMVMDDATGQNRVQLMSSSANSMLHLGYL
IDQSGNTRGSYLGSGFDLRSDAYGAVRASQGLYLTTHSKSASSQPLDVREAQEQLINAESVIEAMSQASQTHQAESLDEG
HKALKTFTDATQNSVQGTSSGGTTAGGGTGSANVFKSPVMLIAAPAGIALSTQDSVHVSSEHQTNIVGGQSTFITSGKSL
VASVAEKISLFVQNAGMKLFAAKGKVEIQAHADNVEVAAQKSVKVLAATESVEAIAKQEILLTSGGAYIRLSGGNIEIHA
PGKIDIKGATHNFSGPTSLSKSMNEWPNMPHDEEFILRHHATGQPMANRRFELTRADGSVITGRTNANGGTGIQKSSMIE
RMRLKFLPEGKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 97891; Mature: 97891

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLTELIQALRGGLIQQDRLLKADIPALPENALLPRRAVSYSELGRDFSVTLDMVSTASD
CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHCCCEEEEEEECCCCCC
IELKTLIAQSMTLWILQADKSYLPINGYIHTARRLGAEGSQASYQLTFASWMHFLKYRRD
CHHHHHHHCCEEEEEEECCCCCCCCCCEEHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHH
MRYWQDRSVDAIIADVFNAHPQARGQFQFALSKPLPSRSYCRQSESDWNFVHRLMEEEGL
HHHHHCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHCCCCCHHHHHHHHHHCCC
FGFWRQNKDGKSHTLVVTDDVHSLDQIQSNPVEFYRADAGSEVDAFTQWAGSRTLQSSVH
EEEEECCCCCCCEEEEEECCHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCCHHHHHHCC
TTRTFDYKAPSLGANSKGTTLPTMVGQGNLPEQTEVYEYTGAYTYDRQDRGEHLSKVHLE
CEEEECCCCCCCCCCCCCCCCCEECCCCCCCCCCEEEEECCCEEECCCHHHHHHHHHHHH
EWESRAKRFTGAGGVRGIDAGLRFELSGHPEHDRDPAGQREFAALKVWRYIENNLPLSDQ
HHHHHHHHCCCCCCCCEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
EASFPHSLREELARSKSKFSGVDVKHDDGSAGFYLVEVEAQRTTVPYRCPFEHKKPEMHL
CCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEEEECCCCCCCEECCCCCCCCCEEE
ETAIVVGPQGEEVYTDELNRVKVMFIWDRQNQGDAGASCWVRVAQLDTGGGYGGVHMPRV
EEEEEECCCCCEEECCCCCCEEEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCCCCCC
GEEVLVGYLGGDCDRPIVLHRVYNGKVRPQWHSNGILSGNRSKEYGGSGYNQMVMDDATG
CHHHEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCC
QNRVQLMSSSANSMLHLGYLIDQSGNTRGSYLGSGFDLRSDAYGAVRASQGLYLTTHSKS
CCCEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCC
ASSQPLDVREAQEQLINAESVIEAMSQASQTHQAESLDEGHKALKTFTDATQNSVQGTSS
CCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GGTTAGGGTGSANVFKSPVMLIAAPAGIALSTQDSVHVSSEHQTNIVGGQSTFITSGKSL
CCCCCCCCCCCCHHHCCCEEEEEECCCEEEECCCCEEECCCCCCEEECCCCEEEECCHHH
VASVAEKISLFVQNAGMKLFAAKGKVEIQAHADNVEVAAQKSVKVLAATESVEAIAKQEI
HHHHHHHHHHHHHCCCCEEEEECCEEEEEEECCCEEEECCCCEEEEEEHHHHHHHHHCEE
LLTSGGAYIRLSGGNIEIHAPGKIDIKGATHNFSGPTSLSKSMNEWPNMPHDEEFILRHH
EEECCCCEEEEECCEEEEECCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCHHHHEEEC
ATGQPMANRRFELTRADGSVITGRTNANGGTGIQKSSMIERMRLKFLPEGKG
CCCCCCCCCEEEEEECCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNLTELIQALRGGLIQQDRLLKADIPALPENALLPRRAVSYSELGRDFSVTLDMVSTASD
CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHCCCEEEEEEECCCCCC
IELKTLIAQSMTLWILQADKSYLPINGYIHTARRLGAEGSQASYQLTFASWMHFLKYRRD
CHHHHHHHCCEEEEEEECCCCCCCCCCEEHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHH
MRYWQDRSVDAIIADVFNAHPQARGQFQFALSKPLPSRSYCRQSESDWNFVHRLMEEEGL
HHHHHCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHCCCCCHHHHHHHHHHCCC
FGFWRQNKDGKSHTLVVTDDVHSLDQIQSNPVEFYRADAGSEVDAFTQWAGSRTLQSSVH
EEEEECCCCCCCEEEEEECCHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCCHHHHHHCC
TTRTFDYKAPSLGANSKGTTLPTMVGQGNLPEQTEVYEYTGAYTYDRQDRGEHLSKVHLE
CEEEECCCCCCCCCCCCCCCCCEECCCCCCCCCCEEEEECCCEEECCCHHHHHHHHHHHH
EWESRAKRFTGAGGVRGIDAGLRFELSGHPEHDRDPAGQREFAALKVWRYIENNLPLSDQ
HHHHHHHHCCCCCCCCEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
EASFPHSLREELARSKSKFSGVDVKHDDGSAGFYLVEVEAQRTTVPYRCPFEHKKPEMHL
CCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEEEECCCCCCCEECCCCCCCCCEEE
ETAIVVGPQGEEVYTDELNRVKVMFIWDRQNQGDAGASCWVRVAQLDTGGGYGGVHMPRV
EEEEEECCCCCEEECCCCCCEEEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCCCCCC
GEEVLVGYLGGDCDRPIVLHRVYNGKVRPQWHSNGILSGNRSKEYGGSGYNQMVMDDATG
CHHHEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCC
QNRVQLMSSSANSMLHLGYLIDQSGNTRGSYLGSGFDLRSDAYGAVRASQGLYLTTHSKS
CCCEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCC
ASSQPLDVREAQEQLINAESVIEAMSQASQTHQAESLDEGHKALKTFTDATQNSVQGTSS
CCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GGTTAGGGTGSANVFKSPVMLIAAPAGIALSTQDSVHVSSEHQTNIVGGQSTFITSGKSL
CCCCCCCCCCCCHHHCCCEEEEEECCCEEEECCCCEEECCCCCCEEECCCCEEEECCHHH
VASVAEKISLFVQNAGMKLFAAKGKVEIQAHADNVEVAAQKSVKVLAATESVEAIAKQEI
HHHHHHHHHHHHHCCCCEEEEECCEEEEEEECCCEEEECCCCEEEEEEHHHHHHHHHCEE
LLTSGGAYIRLSGGNIEIHAPGKIDIKGATHNFSGPTSLSKSMNEWPNMPHDEEFILRHH
EEECCCCEEEEECCEEEEECCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCHHHHEEEC
ATGQPMANRRFELTRADGSVITGRTNANGGTGIQKSSMIERMRLKFLPEGKG
CCCCCCCCCEEEEEECCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA