| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024097
Identifier: 238024097
GI number: 238024097
Start: 793197
End: 795875
Strand: Direct
Name: 238024097
Synonym: bglu_2g06650
Alternate gene names: NA
Gene position: 793197-795875 (Clockwise)
Preceding gene: 238024095
Following gene: 238024098
Centisome position: 28.05
GC content: 57.15
Gene sequence:
>2679_bases ATGAACTTGACTGAATTGATTCAGGCGCTTCGCGGCGGGCTGATCCAGCAAGACAGGCTATTGAAAGCTGACATTCCAGC GTTGCCGGAAAACGCGCTGCTGCCGCGTCGCGCGGTAAGTTACTCTGAGTTGGGTCGCGACTTCAGCGTTACTCTCGATA TGGTGTCGACGGCCAGTGATATCGAGTTGAAAACGCTGATTGCGCAGTCGATGACGCTTTGGATATTGCAGGCCGACAAG TCCTATTTGCCGATCAACGGCTACATCCACACGGCTCGCCGACTCGGCGCGGAAGGCAGCCAGGCAAGCTATCAGCTGAC GTTCGCTTCCTGGATGCACTTCCTCAAATATCGTCGCGACATGCGGTATTGGCAAGATCGAAGCGTCGACGCGATCATCG CCGATGTGTTCAACGCTCATCCGCAGGCGAGAGGGCAGTTCCAGTTTGCACTGTCGAAGCCGCTGCCATCGCGGTCCTAT TGTCGTCAAAGCGAATCCGACTGGAACTTTGTCCATCGGTTGATGGAAGAGGAAGGTCTGTTCGGTTTCTGGCGGCAGAA CAAGGATGGTAAATCGCATACGTTGGTAGTGACCGACGACGTTCACTCGCTCGATCAGATACAAAGCAATCCTGTCGAGT TTTACAGAGCCGACGCTGGCAGCGAAGTGGATGCGTTCACGCAGTGGGCGGGTTCTCGGACATTGCAGAGTTCGGTACAT ACAACCCGCACATTTGACTACAAGGCGCCATCACTGGGTGCCAATTCCAAGGGCACGACACTGCCGACCATGGTTGGCCA GGGAAATCTGCCCGAACAGACTGAGGTCTACGAGTACACGGGGGCCTACACCTACGATCGACAGGACCGAGGCGAGCATC TTTCCAAAGTCCATCTGGAGGAGTGGGAATCACGCGCCAAACGTTTCACCGGAGCGGGTGGCGTGCGTGGCATCGATGCG GGTTTGCGGTTCGAACTGAGCGGCCACCCGGAGCATGACCGCGATCCTGCCGGCCAGCGAGAGTTTGCTGCGCTCAAGGT ATGGCGCTACATCGAAAACAATCTTCCACTGTCGGATCAGGAAGCCAGTTTCCCGCACAGCTTGCGGGAAGAGTTGGCCC GGTCAAAATCGAAATTCTCAGGCGTCGACGTCAAACACGACGATGGTTCGGCGGGCTTCTATTTGGTCGAAGTCGAGGCG CAACGTACCACGGTCCCGTATCGTTGTCCGTTCGAACACAAGAAGCCGGAGATGCACCTCGAGACGGCAATCGTCGTCGG CCCGCAAGGCGAAGAGGTATACACGGACGAACTGAACCGCGTGAAGGTGATGTTCATCTGGGACCGACAGAATCAGGGTG ACGCGGGTGCTTCGTGCTGGGTTCGAGTGGCGCAGTTGGATACGGGCGGCGGTTACGGCGGTGTCCATATGCCCCGCGTC GGGGAAGAGGTACTGGTCGGTTATCTAGGTGGTGATTGCGATAGACCGATCGTCCTGCATCGCGTCTACAACGGAAAAGT TAGGCCGCAGTGGCACAGCAACGGCATTCTGTCCGGGAACCGCTCCAAGGAATACGGCGGCAGCGGCTACAACCAGATGG TGATGGACGACGCGACCGGGCAGAACCGGGTCCAACTGATGAGCAGCAGCGCGAACAGCATGCTGCATTTGGGTTATCTG ATCGACCAGAGCGGCAACACACGAGGTTCGTATCTTGGATCAGGCTTCGATTTGCGGTCGGATGCCTACGGTGCGGTTCG CGCGTCCCAAGGTCTATATCTGACTACCCATTCCAAGTCGGCGAGCAGCCAACCCCTGGATGTACGCGAGGCCCAGGAAC AACTCATCAATGCCGAAAGCGTGATCGAGGCGATGTCGCAGGCGAGCCAAACGCATCAGGCGGAAAGCCTGGATGAAGGC CACAAGGCGCTCAAAACCTTTACCGATGCGACCCAGAATAGTGTGCAGGGAACATCGTCGGGCGGCACAACCGCGGGGGG CGGTACGGGCAGCGCGAATGTTTTCAAATCGCCGGTCATGTTGATTGCGGCCCCTGCCGGTATCGCCTTGTCGACGCAGG ATTCCGTGCATGTGTCGAGCGAGCATCAAACGAACATCGTCGGTGGCCAGAGCACGTTCATCACGAGTGGCAAGTCGCTG GTCGCAAGTGTCGCGGAGAAGATCAGCCTATTCGTGCAGAACGCCGGGATGAAGCTGTTTGCCGCGAAAGGAAAGGTTGA GATCCAGGCGCATGCAGACAATGTCGAAGTCGCCGCGCAGAAATCCGTGAAGGTGCTGGCGGCAACAGAGAGCGTCGAGG CCATTGCAAAACAGGAAATCCTGTTAACGTCCGGCGGTGCGTACATTCGCCTTTCGGGCGGCAACATCGAGATCCATGCC CCCGGCAAGATCGATATCAAGGGTGCCACACATAATTTCTCTGGGCCGACTTCCTTGTCGAAATCAATGAACGAATGGCC CAACATGCCGCACGACGAAGAGTTCATACTTCGTCATCACGCGACCGGGCAACCGATGGCGAACCGGCGCTTTGAATTAA CCCGAGCAGATGGTTCCGTGATCACCGGCCGGACCAACGCAAACGGTGGAACTGGCATACAGAAGAGTTCAATGATCGAG AGGATGCGCCTCAAATTTTTGCCCGAGGGTAAGGGATGA
Upstream 100 bases:
>100_bases TGGTCCTAGTGGCTGTCCTCCCCTAGATTAATAAGGGACGGCCGTCCCTGCGAGAGAGTAGGTCCACACGATCTACTATG AACACGACCAAAGGCAGCAC
Downstream 100 bases:
>100_bases ACGACAAGACGCGGACCGTAGCGCGCAGCTACGACGAAGACGGACTACCGGTCTGGCATTCGCAGACATCGCCAACGAGT ATGACAACTCGTGCGGAATG
Product: Rhs element Vgr protein
Products: NA
Alternate protein names: Type VI Secretion System Vgr Family Protein; VGR-Related Protein; Rhs Element Vgr Family Protein; Vgr-Related Protein; Rhs-Family Protein; Rhs Element Vgr Family; VGR-Like Protein; VgrG Protein; VGR-Related Type VI Secretion System Protein; Vgr Related Protein; Rhs Element Vgr Related Protein; Replication/Virulence Associated Protein; Conserved Hypothethical Protein; Type VI Secretion System VgrG Family Protein; Rhs Family Protein; Rhs Element Vgr-Related Protein; VgrG Family T6SS G
Number of amino acids: Translated: 892; Mature: 892
Protein sequence:
>892_residues MNLTELIQALRGGLIQQDRLLKADIPALPENALLPRRAVSYSELGRDFSVTLDMVSTASDIELKTLIAQSMTLWILQADK SYLPINGYIHTARRLGAEGSQASYQLTFASWMHFLKYRRDMRYWQDRSVDAIIADVFNAHPQARGQFQFALSKPLPSRSY CRQSESDWNFVHRLMEEEGLFGFWRQNKDGKSHTLVVTDDVHSLDQIQSNPVEFYRADAGSEVDAFTQWAGSRTLQSSVH TTRTFDYKAPSLGANSKGTTLPTMVGQGNLPEQTEVYEYTGAYTYDRQDRGEHLSKVHLEEWESRAKRFTGAGGVRGIDA GLRFELSGHPEHDRDPAGQREFAALKVWRYIENNLPLSDQEASFPHSLREELARSKSKFSGVDVKHDDGSAGFYLVEVEA QRTTVPYRCPFEHKKPEMHLETAIVVGPQGEEVYTDELNRVKVMFIWDRQNQGDAGASCWVRVAQLDTGGGYGGVHMPRV GEEVLVGYLGGDCDRPIVLHRVYNGKVRPQWHSNGILSGNRSKEYGGSGYNQMVMDDATGQNRVQLMSSSANSMLHLGYL IDQSGNTRGSYLGSGFDLRSDAYGAVRASQGLYLTTHSKSASSQPLDVREAQEQLINAESVIEAMSQASQTHQAESLDEG HKALKTFTDATQNSVQGTSSGGTTAGGGTGSANVFKSPVMLIAAPAGIALSTQDSVHVSSEHQTNIVGGQSTFITSGKSL VASVAEKISLFVQNAGMKLFAAKGKVEIQAHADNVEVAAQKSVKVLAATESVEAIAKQEILLTSGGAYIRLSGGNIEIHA PGKIDIKGATHNFSGPTSLSKSMNEWPNMPHDEEFILRHHATGQPMANRRFELTRADGSVITGRTNANGGTGIQKSSMIE RMRLKFLPEGKG
Sequences:
>Translated_892_residues MNLTELIQALRGGLIQQDRLLKADIPALPENALLPRRAVSYSELGRDFSVTLDMVSTASDIELKTLIAQSMTLWILQADK SYLPINGYIHTARRLGAEGSQASYQLTFASWMHFLKYRRDMRYWQDRSVDAIIADVFNAHPQARGQFQFALSKPLPSRSY CRQSESDWNFVHRLMEEEGLFGFWRQNKDGKSHTLVVTDDVHSLDQIQSNPVEFYRADAGSEVDAFTQWAGSRTLQSSVH TTRTFDYKAPSLGANSKGTTLPTMVGQGNLPEQTEVYEYTGAYTYDRQDRGEHLSKVHLEEWESRAKRFTGAGGVRGIDA GLRFELSGHPEHDRDPAGQREFAALKVWRYIENNLPLSDQEASFPHSLREELARSKSKFSGVDVKHDDGSAGFYLVEVEA QRTTVPYRCPFEHKKPEMHLETAIVVGPQGEEVYTDELNRVKVMFIWDRQNQGDAGASCWVRVAQLDTGGGYGGVHMPRV GEEVLVGYLGGDCDRPIVLHRVYNGKVRPQWHSNGILSGNRSKEYGGSGYNQMVMDDATGQNRVQLMSSSANSMLHLGYL IDQSGNTRGSYLGSGFDLRSDAYGAVRASQGLYLTTHSKSASSQPLDVREAQEQLINAESVIEAMSQASQTHQAESLDEG HKALKTFTDATQNSVQGTSSGGTTAGGGTGSANVFKSPVMLIAAPAGIALSTQDSVHVSSEHQTNIVGGQSTFITSGKSL VASVAEKISLFVQNAGMKLFAAKGKVEIQAHADNVEVAAQKSVKVLAATESVEAIAKQEILLTSGGAYIRLSGGNIEIHA PGKIDIKGATHNFSGPTSLSKSMNEWPNMPHDEEFILRHHATGQPMANRRFELTRADGSVITGRTNANGGTGIQKSSMIE RMRLKFLPEGKG >Mature_892_residues MNLTELIQALRGGLIQQDRLLKADIPALPENALLPRRAVSYSELGRDFSVTLDMVSTASDIELKTLIAQSMTLWILQADK SYLPINGYIHTARRLGAEGSQASYQLTFASWMHFLKYRRDMRYWQDRSVDAIIADVFNAHPQARGQFQFALSKPLPSRSY CRQSESDWNFVHRLMEEEGLFGFWRQNKDGKSHTLVVTDDVHSLDQIQSNPVEFYRADAGSEVDAFTQWAGSRTLQSSVH TTRTFDYKAPSLGANSKGTTLPTMVGQGNLPEQTEVYEYTGAYTYDRQDRGEHLSKVHLEEWESRAKRFTGAGGVRGIDA GLRFELSGHPEHDRDPAGQREFAALKVWRYIENNLPLSDQEASFPHSLREELARSKSKFSGVDVKHDDGSAGFYLVEVEA QRTTVPYRCPFEHKKPEMHLETAIVVGPQGEEVYTDELNRVKVMFIWDRQNQGDAGASCWVRVAQLDTGGGYGGVHMPRV GEEVLVGYLGGDCDRPIVLHRVYNGKVRPQWHSNGILSGNRSKEYGGSGYNQMVMDDATGQNRVQLMSSSANSMLHLGYL IDQSGNTRGSYLGSGFDLRSDAYGAVRASQGLYLTTHSKSASSQPLDVREAQEQLINAESVIEAMSQASQTHQAESLDEG HKALKTFTDATQNSVQGTSSGGTTAGGGTGSANVFKSPVMLIAAPAGIALSTQDSVHVSSEHQTNIVGGQSTFITSGKSL VASVAEKISLFVQNAGMKLFAAKGKVEIQAHADNVEVAAQKSVKVLAATESVEAIAKQEILLTSGGAYIRLSGGNIEIHA PGKIDIKGATHNFSGPTSLSKSMNEWPNMPHDEEFILRHHATGQPMANRRFELTRADGSVITGRTNANGGTGIQKSSMIE RMRLKFLPEGKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 97891; Mature: 97891
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLTELIQALRGGLIQQDRLLKADIPALPENALLPRRAVSYSELGRDFSVTLDMVSTASD CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHCCCEEEEEEECCCCCC IELKTLIAQSMTLWILQADKSYLPINGYIHTARRLGAEGSQASYQLTFASWMHFLKYRRD CHHHHHHHCCEEEEEEECCCCCCCCCCEEHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHH MRYWQDRSVDAIIADVFNAHPQARGQFQFALSKPLPSRSYCRQSESDWNFVHRLMEEEGL HHHHHCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHCCCCCHHHHHHHHHHCCC FGFWRQNKDGKSHTLVVTDDVHSLDQIQSNPVEFYRADAGSEVDAFTQWAGSRTLQSSVH EEEEECCCCCCCEEEEEECCHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCCHHHHHHCC TTRTFDYKAPSLGANSKGTTLPTMVGQGNLPEQTEVYEYTGAYTYDRQDRGEHLSKVHLE CEEEECCCCCCCCCCCCCCCCCEECCCCCCCCCCEEEEECCCEEECCCHHHHHHHHHHHH EWESRAKRFTGAGGVRGIDAGLRFELSGHPEHDRDPAGQREFAALKVWRYIENNLPLSDQ HHHHHHHHCCCCCCCCEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC EASFPHSLREELARSKSKFSGVDVKHDDGSAGFYLVEVEAQRTTVPYRCPFEHKKPEMHL CCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEEEECCCCCCCEECCCCCCCCCEEE ETAIVVGPQGEEVYTDELNRVKVMFIWDRQNQGDAGASCWVRVAQLDTGGGYGGVHMPRV EEEEEECCCCCEEECCCCCCEEEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCCCCCC GEEVLVGYLGGDCDRPIVLHRVYNGKVRPQWHSNGILSGNRSKEYGGSGYNQMVMDDATG CHHHEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCC QNRVQLMSSSANSMLHLGYLIDQSGNTRGSYLGSGFDLRSDAYGAVRASQGLYLTTHSKS CCCEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCC ASSQPLDVREAQEQLINAESVIEAMSQASQTHQAESLDEGHKALKTFTDATQNSVQGTSS CCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GGTTAGGGTGSANVFKSPVMLIAAPAGIALSTQDSVHVSSEHQTNIVGGQSTFITSGKSL CCCCCCCCCCCCHHHCCCEEEEEECCCEEEECCCCEEECCCCCCEEECCCCEEEECCHHH VASVAEKISLFVQNAGMKLFAAKGKVEIQAHADNVEVAAQKSVKVLAATESVEAIAKQEI HHHHHHHHHHHHHCCCCEEEEECCEEEEEEECCCEEEECCCCEEEEEEHHHHHHHHHCEE LLTSGGAYIRLSGGNIEIHAPGKIDIKGATHNFSGPTSLSKSMNEWPNMPHDEEFILRHH EEECCCCEEEEECCEEEEECCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCHHHHEEEC ATGQPMANRRFELTRADGSVITGRTNANGGTGIQKSSMIERMRLKFLPEGKG CCCCCCCCCEEEEEECCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNLTELIQALRGGLIQQDRLLKADIPALPENALLPRRAVSYSELGRDFSVTLDMVSTASD CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHCCCEEEEEEECCCCCC IELKTLIAQSMTLWILQADKSYLPINGYIHTARRLGAEGSQASYQLTFASWMHFLKYRRD CHHHHHHHCCEEEEEEECCCCCCCCCCEEHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHH MRYWQDRSVDAIIADVFNAHPQARGQFQFALSKPLPSRSYCRQSESDWNFVHRLMEEEGL HHHHHCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHCCCCCHHHHHHHHHHCCC FGFWRQNKDGKSHTLVVTDDVHSLDQIQSNPVEFYRADAGSEVDAFTQWAGSRTLQSSVH EEEEECCCCCCCEEEEEECCHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCCHHHHHHCC TTRTFDYKAPSLGANSKGTTLPTMVGQGNLPEQTEVYEYTGAYTYDRQDRGEHLSKVHLE CEEEECCCCCCCCCCCCCCCCCEECCCCCCCCCCEEEEECCCEEECCCHHHHHHHHHHHH EWESRAKRFTGAGGVRGIDAGLRFELSGHPEHDRDPAGQREFAALKVWRYIENNLPLSDQ HHHHHHHHCCCCCCCCEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC EASFPHSLREELARSKSKFSGVDVKHDDGSAGFYLVEVEAQRTTVPYRCPFEHKKPEMHL CCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEEEECCCCCCCEECCCCCCCCCEEE ETAIVVGPQGEEVYTDELNRVKVMFIWDRQNQGDAGASCWVRVAQLDTGGGYGGVHMPRV EEEEEECCCCCEEECCCCCCEEEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCCCCCC GEEVLVGYLGGDCDRPIVLHRVYNGKVRPQWHSNGILSGNRSKEYGGSGYNQMVMDDATG CHHHEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCC QNRVQLMSSSANSMLHLGYLIDQSGNTRGSYLGSGFDLRSDAYGAVRASQGLYLTTHSKS CCCEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCC ASSQPLDVREAQEQLINAESVIEAMSQASQTHQAESLDEGHKALKTFTDATQNSVQGTSS CCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GGTTAGGGTGSANVFKSPVMLIAAPAGIALSTQDSVHVSSEHQTNIVGGQSTFITSGKSL CCCCCCCCCCCCHHHCCCEEEEEECCCEEEECCCCEEECCCCCCEEECCCCEEEECCHHH VASVAEKISLFVQNAGMKLFAAKGKVEIQAHADNVEVAAQKSVKVLAATESVEAIAKQEI HHHHHHHHHHHHHCCCCEEEEECCEEEEEEECCCEEEECCCCEEEEEEHHHHHHHHHCEE LLTSGGAYIRLSGGNIEIHAPGKIDIKGATHNFSGPTSLSKSMNEWPNMPHDEEFILRHH EEECCCCEEEEECCEEEEECCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCHHHHEEEC ATGQPMANRRFELTRADGSVITGRTNANGGTGIQKSSMIERMRLKFLPEGKG CCCCCCCCCEEEEEECCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA