| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is yfiQ [C]
Identifier: 238024091
GI number: 238024091
Start: 783678
End: 785837
Strand: Reverse
Name: yfiQ [C]
Synonym: bglu_2g06550
Alternate gene names: 238024091
Gene position: 785837-783678 (Counterclockwise)
Preceding gene: 238024092
Following gene: 238024089
Centisome position: 27.79
GC content: 66.62
Gene sequence:
>2160_bases ATGAACCTGATCCAGTCTGGAACCTGGCCTGCGGCGACAGGCCAGGCCGTGGCGCGCCTGCTGCGACCGTCATCGATTGC CATCGTCGGCGCCTCGCCGACGCCGGGTGCGCTCGGGGCATCGGTGCTGGCCAATCTCGAGCGCAACGACTATCGAGGCC AGATCTATCTGGTCAATCCGAAGCGCGACGAGATCAACGGCCGGCCATGCGTGAATTCGATCGCACAGTTGCCGGACGGC GTCGATGTTGCCGTGCTGGCGATTCCGCAGGCCGCGGTGCTGGACGCCGTACGTCAGCTCGCCGCGCGCAAGGTCGGTGC GGTGGTTATCTTTTCGGCGGGCTTCGCCGAGGCGGGTGCCGAGGGAATCGCCCAGCAGCAGGAGATCGCGAGGATTGCCG CAGAAACGGGCATGCTCGTCGAAGGGCCGAACTGCCTTGGTTGCATCAACTATCTCGAGCGCGTGCCGCTGACGTTTATC GAAACGGCCGTGAGTGCGGAGCAAGCGAGCCGCAATCGCAGCCAGCCCGCGATCGGGATTCTCTCCCAGAGCGGCGCCAT GATGGCGGTGCTCAATACGACGCTCGCGAGCCGCGGGCTGCCGTTGTCGTATGCGGTTTCGACCGGGAACGAGGCGGCGA GCCATCTCGAAGACTACCTGCAGTTCCTGCTGGACGATGCCGGCACCCGCGTCATCGCGATGATCGCGGAGCAATTCCGG CAGCCGGCCCGGCTGCTGGAGATCGCACGCCATGCCCGCCGGGCTGGCAAGCTGCTGGTGCTGCTGCATCCCGGCAGGAG CGCCGCGGCGCGCGCGTCGGCGGCCACGCATACCGGTGCGATGGCTGGCGACCACTCGCTGATGCGCACCAAGGTCGAAC GCGCGGGCGTCGTGATCGCACCGACCCTGGAGGAACTCGGCGATATCGCGGAAATCGGCCTGCGCTGCGCGCACCTGCCG TCACGCGGCACGGCGATTGTCGGCGAATCGGGGGCATTCAAGGCTCTGTGCCTGGACATCTGCGAAGGGCTCGGCCTCGA ACTGCCGGCCCTGAGCGACGACGATGCGCCCGCGTTGCGCGCCGCGATGCCGGCGTTCGTCGCGGTCAGTAATCCGCTCG ATCTGACCGCGCAGGGGCTGGTGGACCCCGAGCTTTACTACCGCACGCTCTCGGCGCTGTTCGACGACGATCGCTTTTCT GCGATCGTCGTCGGCCTGATCCAGACCGATCCGGTCACTTGCGCGATCAAGATGCCCCCCGTGTTGCGCGCCGTGCTCGA ACTGCGCCCCGACAAACCCGTGATCTGCGCCGGTCTGGACGAGGGCGCAGCGGTGCCGGCCGAGTACATCGAACAGATGC GCGAACTGGGCATCCCATACTTCCCCGGCACGGAACGCGCATTACGGGCGGTGGCCCGGCTTGTCGAGCTCGGAGGCCGA GACTTCAGCGAGGTAGATCACGCGCCGGTGGAGATTGGCCTGCCTTTGCAGGAAGGCGTGATCCCGGAGCACCGTGCGAA AGCGATGCTCGCTCCGCTGGGTATCCCGTTCGCACGCGGCGCACTGGCGGCCGACATCGACGATGCGCTCGCGATTGCCG GGCGCGTCGGTTATCCCGTCGCCCTCAAGGTGCAGTCGGGTGATATCAGCCACAAGAGCGATGTCGGTGGCGTGATGCTT GGCATCGATGATGCGCAGGCTCTCCGGGCGGCGTGGATGCAGTTGGGCAGCAACGTGAAGCGCCATGCACCGTCTGCCGT GATCGAAGGCGTACTGGTCGAAGCGATGGGCGATCGCGGCCTCGAGATGATCGTGGGCGCGCGTAACGATCCGCAGTGGG GCCCCGTGATTCTGGTCGGTTTCGGTGGCGTGGCAGCGGAGGTCATGCACGACGTCCGCCTGCTGCCGCATGACCTGCCA AGGGATGGCGTGATACGCGAGATCAGCCTGCTGAAGGGGGCTGCACTGCTGCGCGGCTTTCGCGGTGAGCCTGCACGCGA TGTCGGTGCGCTCGCGGATATCGTCATGCGTCTGGGCGCGTTGCTGCAGTACGAGCCGGGCATCCGCGAGATCGACCTGA ATCCGGTGGTCCTCTATCCGGAAGGACGCGGCGCGCTTGCGCTCGATGCGCTGATGCTGGTCGAACCCGCGTCGAACTGA
Upstream 100 bases:
>100_bases GGAGGGGCTCAAACAGTTCCTTGACGACAAGACCTACAAGCCGGGCCTTGGCACTTACGACCTCAAGCGACAGCGTACCT GAGCACGGGAGCCCGTTGAC
Downstream 100 bases:
>100_bases GCGTTCTTGAACCGGCCGGGGCGCGGTCGAAGCCCCGGCCGGCTTCCCACCATTCAGCCGGCGAAAATTTTTGTCAGGAG GGATTTGAGTTGTTCGCGCC
Product: feruloyl-CoA synthetase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 719; Mature: 719
Protein sequence:
>719_residues MNLIQSGTWPAATGQAVARLLRPSSIAIVGASPTPGALGASVLANLERNDYRGQIYLVNPKRDEINGRPCVNSIAQLPDG VDVAVLAIPQAAVLDAVRQLAARKVGAVVIFSAGFAEAGAEGIAQQQEIARIAAETGMLVEGPNCLGCINYLERVPLTFI ETAVSAEQASRNRSQPAIGILSQSGAMMAVLNTTLASRGLPLSYAVSTGNEAASHLEDYLQFLLDDAGTRVIAMIAEQFR QPARLLEIARHARRAGKLLVLLHPGRSAAARASAATHTGAMAGDHSLMRTKVERAGVVIAPTLEELGDIAEIGLRCAHLP SRGTAIVGESGAFKALCLDICEGLGLELPALSDDDAPALRAAMPAFVAVSNPLDLTAQGLVDPELYYRTLSALFDDDRFS AIVVGLIQTDPVTCAIKMPPVLRAVLELRPDKPVICAGLDEGAAVPAEYIEQMRELGIPYFPGTERALRAVARLVELGGR DFSEVDHAPVEIGLPLQEGVIPEHRAKAMLAPLGIPFARGALAADIDDALAIAGRVGYPVALKVQSGDISHKSDVGGVML GIDDAQALRAAWMQLGSNVKRHAPSAVIEGVLVEAMGDRGLEMIVGARNDPQWGPVILVGFGGVAAEVMHDVRLLPHDLP RDGVIREISLLKGAALLRGFRGEPARDVGALADIVMRLGALLQYEPGIREIDLNPVVLYPEGRGALALDALMLVEPASN
Sequences:
>Translated_719_residues MNLIQSGTWPAATGQAVARLLRPSSIAIVGASPTPGALGASVLANLERNDYRGQIYLVNPKRDEINGRPCVNSIAQLPDG VDVAVLAIPQAAVLDAVRQLAARKVGAVVIFSAGFAEAGAEGIAQQQEIARIAAETGMLVEGPNCLGCINYLERVPLTFI ETAVSAEQASRNRSQPAIGILSQSGAMMAVLNTTLASRGLPLSYAVSTGNEAASHLEDYLQFLLDDAGTRVIAMIAEQFR QPARLLEIARHARRAGKLLVLLHPGRSAAARASAATHTGAMAGDHSLMRTKVERAGVVIAPTLEELGDIAEIGLRCAHLP SRGTAIVGESGAFKALCLDICEGLGLELPALSDDDAPALRAAMPAFVAVSNPLDLTAQGLVDPELYYRTLSALFDDDRFS AIVVGLIQTDPVTCAIKMPPVLRAVLELRPDKPVICAGLDEGAAVPAEYIEQMRELGIPYFPGTERALRAVARLVELGGR DFSEVDHAPVEIGLPLQEGVIPEHRAKAMLAPLGIPFARGALAADIDDALAIAGRVGYPVALKVQSGDISHKSDVGGVML GIDDAQALRAAWMQLGSNVKRHAPSAVIEGVLVEAMGDRGLEMIVGARNDPQWGPVILVGFGGVAAEVMHDVRLLPHDLP RDGVIREISLLKGAALLRGFRGEPARDVGALADIVMRLGALLQYEPGIREIDLNPVVLYPEGRGALALDALMLVEPASN >Mature_719_residues MNLIQSGTWPAATGQAVARLLRPSSIAIVGASPTPGALGASVLANLERNDYRGQIYLVNPKRDEINGRPCVNSIAQLPDG VDVAVLAIPQAAVLDAVRQLAARKVGAVVIFSAGFAEAGAEGIAQQQEIARIAAETGMLVEGPNCLGCINYLERVPLTFI ETAVSAEQASRNRSQPAIGILSQSGAMMAVLNTTLASRGLPLSYAVSTGNEAASHLEDYLQFLLDDAGTRVIAMIAEQFR QPARLLEIARHARRAGKLLVLLHPGRSAAARASAATHTGAMAGDHSLMRTKVERAGVVIAPTLEELGDIAEIGLRCAHLP SRGTAIVGESGAFKALCLDICEGLGLELPALSDDDAPALRAAMPAFVAVSNPLDLTAQGLVDPELYYRTLSALFDDDRFS AIVVGLIQTDPVTCAIKMPPVLRAVLELRPDKPVICAGLDEGAAVPAEYIEQMRELGIPYFPGTERALRAVARLVELGGR DFSEVDHAPVEIGLPLQEGVIPEHRAKAMLAPLGIPFARGALAADIDDALAIAGRVGYPVALKVQSGDISHKSDVGGVML GIDDAQALRAAWMQLGSNVKRHAPSAVIEGVLVEAMGDRGLEMIVGARNDPQWGPVILVGFGGVAAEVMHDVRLLPHDLP RDGVIREISLLKGAALLRGFRGEPARDVGALADIVMRLGALLQYEPGIREIDLNPVVLYPEGRGALALDALMLVEPASN
Specific function: Unknown
COG id: COG1042
COG function: function code C; Acyl-CoA synthetase (NDP forming)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yfiQ [H]
Homologues:
Organism=Escherichia coli, GI1788938, Length=723, Percent_Identity=28.0774550484094, Blast_Score=179, Evalue=6e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014089 - InterPro: IPR013650 - InterPro: IPR003781 - InterPro: IPR016040 - InterPro: IPR005809 - InterPro: IPR016102 [H]
Pfam domain/function: PF08442 ATP-grasp_2; PF02629 CoA_binding [H]
EC number: NA
Molecular weight: Translated: 75653; Mature: 75653
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLIQSGTWPAATGQAVARLLRPSSIAIVGASPTPGALGASVLANLERNDYRGQIYLVNP CCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEECC KRDEINGRPCVNSIAQLPDGVDVAVLAIPQAAVLDAVRQLAARKVGAVVIFSAGFAEAGA CCCCCCCCHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHCCEEEEEECCCHHHCH EGIAQQQEIARIAAETGMLVEGPNCLGCINYLERVPLTFIETAVSAEQASRNRSQPAIGI HHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEE LSQSGAMMAVLNTTLASRGLPLSYAVSTGNEAASHLEDYLQFLLDDAGTRVIAMIAEQFR ECCCCCEEEHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH QPARLLEIARHARRAGKLLVLLHPGRSAAARASAATHTGAMAGDHSLMRTKVERAGVVIA CHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEE PTLEELGDIAEIGLRCAHLPSRGTAIVGESGAFKALCLDICEGLGLELPALSDDDAPALR CCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHH AAMPAFVAVSNPLDLTAQGLVDPELYYRTLSALFDDDRFSAIVVGLIQTDPVTCAIKMPP HHHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEECCH VLRAVLELRPDKPVICAGLDEGAAVPAEYIEQMRELGIPYFPGTERALRAVARLVELGGR HHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCC DFSEVDHAPVEIGLPLQEGVIPEHRAKAMLAPLGIPFARGALAADIDDALAIAGRVGYPV CHHHCCCCCEEECCCHHHCCCCHHHHHHHHHHCCCCHHCCCHHCCCHHHHHHHCCCCCCE ALKVQSGDISHKSDVGGVMLGIDDAQALRAAWMQLGSNVKRHAPSAVIEGVLVEAMGDRG EEEEECCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHCCCC LEMIVGARNDPQWGPVILVGFGGVAAEVMHDVRLLPHDLPRDGVIREISLLKGAALLRGF CEEEEECCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCC RGEPARDVGALADIVMRLGALLQYEPGIREIDLNPVVLYPEGRGALALDALMLVEPASN CCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEEECCCCCHHEEEEEEEECCCC >Mature Secondary Structure MNLIQSGTWPAATGQAVARLLRPSSIAIVGASPTPGALGASVLANLERNDYRGQIYLVNP CCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEECC KRDEINGRPCVNSIAQLPDGVDVAVLAIPQAAVLDAVRQLAARKVGAVVIFSAGFAEAGA CCCCCCCCHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHCCEEEEEECCCHHHCH EGIAQQQEIARIAAETGMLVEGPNCLGCINYLERVPLTFIETAVSAEQASRNRSQPAIGI HHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEE LSQSGAMMAVLNTTLASRGLPLSYAVSTGNEAASHLEDYLQFLLDDAGTRVIAMIAEQFR ECCCCCEEEHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH QPARLLEIARHARRAGKLLVLLHPGRSAAARASAATHTGAMAGDHSLMRTKVERAGVVIA CHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEE PTLEELGDIAEIGLRCAHLPSRGTAIVGESGAFKALCLDICEGLGLELPALSDDDAPALR CCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHH AAMPAFVAVSNPLDLTAQGLVDPELYYRTLSALFDDDRFSAIVVGLIQTDPVTCAIKMPP HHHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEECCH VLRAVLELRPDKPVICAGLDEGAAVPAEYIEQMRELGIPYFPGTERALRAVARLVELGGR HHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCC DFSEVDHAPVEIGLPLQEGVIPEHRAKAMLAPLGIPFARGALAADIDDALAIAGRVGYPV CHHHCCCCCEEECCCHHHCCCCHHHHHHHHHHCCCCHHCCCHHCCCHHHHHHHCCCCCCE ALKVQSGDISHKSDVGGVMLGIDDAQALRAAWMQLGSNVKRHAPSAVIEGVLVEAMGDRG EEEEECCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHCCCC LEMIVGARNDPQWGPVILVGFGGVAAEVMHDVRLLPHDLPRDGVIREISLLKGAALLRGF CEEEEECCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCC RGEPARDVGALADIVMRLGALLQYEPGIREIDLNPVVLYPEGRGALALDALMLVEPASN CCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEEECCCCCHHEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]