| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024086
Identifier: 238024086
GI number: 238024086
Start: 778278
End: 779723
Strand: Direct
Name: 238024086
Synonym: bglu_2g06500
Alternate gene names: NA
Gene position: 778278-779723 (Clockwise)
Preceding gene: 238024085
Following gene: 238024087
Centisome position: 27.53
GC content: 64.73
Gene sequence:
>1446_bases TTGAACTGGCCTCTTAGCGCGTGTGGCGGCGACGACGGTTCGACGACGGGAAGTGCCTCGTCGTCCGGCTCCTCGTCTTC TGCAGGAGGGGTAACGACGAGCGGTGGGACGTCTCAGACCCAGGCGGGTTGGAGCCAGGTGGCCGCACTCGACGGCAAGA CGCTCGCGTTCGAGCCCAGCACGACGATCGATGCGAACGGCGATACCCTGGTGACCTGGATGACCAACGGTCCTGCGGGC GGGGTTGGCAATGAAATGTGGGGCTCGCGGTACGTGCCCGGCGCAGGCTGGAGCACGGCGACGCGGCTCGATACTGGTGA TGGAACGCACGCGATGACCGGGCCGGGCACCATTCAGCCGCAATTGGTCGGCAATGCAGCGGGCCAGGCGGTTGCGTTCT GGACCGAATGGATGCCCGGTCCGAACACTTACGCGCTGTGGGCGCGGCCGTTTAGCCCGAGCGCCGGTTGGGGAACGCCT TATGAAGTGGCGCCGGATGTCACGAGTTCGACCTACACGGCGGGTATCGACGGACAGGGCAATGCCCTTGTCGCGTTCCC GCAGTCGATCAGCCTTCTCGATTCCCGGATCGCGTGGACGCGATACACGCCGGACGGAACGTGGTCGGCCACCGCGCAGA TCCAGATGCCATCGCAGACCGGACCGGGAGCCGTGACGGGCGATACCACGAACGTGCGCCCCATGATTTCGGTCCTGTCG TCCGGTAGCGCGGTGCTGGCGTGGGGACAAACCAACGGCACGCAATCGGCGATCTGGACGGCGACCTATGACGCAAGCAA CGGCTGGACGAACGTCGCCCCGGCCGTGACGAACACGAGCCTTTTCACGAACATCGATGCGCCGACAGCCGGTATGGATG CAAAGGGCAACATCACGCTCGTGTGGGGACAGCTCGACGTTGCCAACGGCAAGATCATGACGACCACCATGTCGCAACGT TACGTGGCGGGCACCGGATGGCAGACCGCGAAGCCGGTGGCCCCGGAAATCACGGAAGCGTCGGGCTTCATCGCCAAACC GATGCTGGCTGTCAGCGAGAACGGCGCGGCCGGCGTCATGTGGGCGGAGGGGGGCGCCGTTTTGAAGGCGAGCGTGGCGG ACACCGCTGGAAATTGGGGGCCGCTCCAGACGCTCACGGAGCATCTGAATTCGCTGGCGGGGCAGCTTCCGCCGCTGGTG ATCGATGGCGCCGGCAATGTTACCGCCGCCTGGCAGGACATGGGCACGGTGAATTCATCGGACGTCATCGCGAGCAGCTA TCGCAATGGGACGTGGACTGCGACGACTTTCGGTCAGAACCCGCAGTCGTCGTCGTGGCCTGCGCTTGCCGTCAATGCGG CCGGTTCGATGGCGCTCATCTGGCAAAACGCCAGTCTGGACGTCGGCCCCCAACTGCAAACCAGTTTTTACACTCCAGGA CGATAA
Upstream 100 bases:
>100_bases TCGTCGTCAATGATTGGCGCTTCCATCCTTGGACTTCCGTTGTTCTGATGCCCAAGGTTAACAGCTTGCCGAGGAAGTAA ACAGCCCCTCTCGGGAGTTT
Downstream 100 bases:
>100_bases CCGACCATGCGAACCTGCTGCTGCGCGCGGGAGCGGCTGCGGCAGGTGTTTGTTCGTATCTTGCGGCGGGACCATCACGG GTTCGTCCGAGCGCGCGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 481; Mature: 481
Protein sequence:
>481_residues MNWPLSACGGDDGSTTGSASSSGSSSSAGGVTTSGGTSQTQAGWSQVAALDGKTLAFEPSTTIDANGDTLVTWMTNGPAG GVGNEMWGSRYVPGAGWSTATRLDTGDGTHAMTGPGTIQPQLVGNAAGQAVAFWTEWMPGPNTYALWARPFSPSAGWGTP YEVAPDVTSSTYTAGIDGQGNALVAFPQSISLLDSRIAWTRYTPDGTWSATAQIQMPSQTGPGAVTGDTTNVRPMISVLS SGSAVLAWGQTNGTQSAIWTATYDASNGWTNVAPAVTNTSLFTNIDAPTAGMDAKGNITLVWGQLDVANGKIMTTTMSQR YVAGTGWQTAKPVAPEITEASGFIAKPMLAVSENGAAGVMWAEGGAVLKASVADTAGNWGPLQTLTEHLNSLAGQLPPLV IDGAGNVTAAWQDMGTVNSSDVIASSYRNGTWTATTFGQNPQSSSWPALAVNAAGSMALIWQNASLDVGPQLQTSFYTPG R
Sequences:
>Translated_481_residues MNWPLSACGGDDGSTTGSASSSGSSSSAGGVTTSGGTSQTQAGWSQVAALDGKTLAFEPSTTIDANGDTLVTWMTNGPAG GVGNEMWGSRYVPGAGWSTATRLDTGDGTHAMTGPGTIQPQLVGNAAGQAVAFWTEWMPGPNTYALWARPFSPSAGWGTP YEVAPDVTSSTYTAGIDGQGNALVAFPQSISLLDSRIAWTRYTPDGTWSATAQIQMPSQTGPGAVTGDTTNVRPMISVLS SGSAVLAWGQTNGTQSAIWTATYDASNGWTNVAPAVTNTSLFTNIDAPTAGMDAKGNITLVWGQLDVANGKIMTTTMSQR YVAGTGWQTAKPVAPEITEASGFIAKPMLAVSENGAAGVMWAEGGAVLKASVADTAGNWGPLQTLTEHLNSLAGQLPPLV IDGAGNVTAAWQDMGTVNSSDVIASSYRNGTWTATTFGQNPQSSSWPALAVNAAGSMALIWQNASLDVGPQLQTSFYTPG R >Mature_481_residues MNWPLSACGGDDGSTTGSASSSGSSSSAGGVTTSGGTSQTQAGWSQVAALDGKTLAFEPSTTIDANGDTLVTWMTNGPAG GVGNEMWGSRYVPGAGWSTATRLDTGDGTHAMTGPGTIQPQLVGNAAGQAVAFWTEWMPGPNTYALWARPFSPSAGWGTP YEVAPDVTSSTYTAGIDGQGNALVAFPQSISLLDSRIAWTRYTPDGTWSATAQIQMPSQTGPGAVTGDTTNVRPMISVLS SGSAVLAWGQTNGTQSAIWTATYDASNGWTNVAPAVTNTSLFTNIDAPTAGMDAKGNITLVWGQLDVANGKIMTTTMSQR YVAGTGWQTAKPVAPEITEASGFIAKPMLAVSENGAAGVMWAEGGAVLKASVADTAGNWGPLQTLTEHLNSLAGQLPPLV IDGAGNVTAAWQDMGTVNSSDVIASSYRNGTWTATTFGQNPQSSSWPALAVNAAGSMALIWQNASLDVGPQLQTSFYTPG R
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49214; Mature: 49214
Theoretical pI: Translated: 4.09; Mature: 4.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNWPLSACGGDDGSTTGSASSSGSSSSAGGVTTSGGTSQTQAGWSQVAALDGKTLAFEPS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHCHHHHEEECCCEEEECCC TTIDANGDTLVTWMTNGPAGGVGNEMWGSRYVPGAGWSTATRLDTGDGTHAMTGPGTIQP CEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCCC QLVGNAAGQAVAFWTEWMPGPNTYALWARPFSPSAGWGTPYEVAPDVTSSTYTAGIDGQG EEECCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCC NALVAFPQSISLLDSRIAWTRYTPDGTWSATAQIQMPSQTGPGAVTGDTTNVRPMISVLS CEEEECCCCHHHHHCCCEEEEECCCCCEEEEEEEEECCCCCCCCEECCCCCHHHHHHHHC SGSAVLAWGQTNGTQSAIWTATYDASNGWTNVAPAVTNTSLFTNIDAPTAGMDAKGNITL CCCEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCEECCEEEEECCCCCCCCCCCCCEEE VWGQLDVANGKIMTTTMSQRYVAGTGWQTAKPVAPEITEASGFIAKPMLAVSENGAAGVM EEEEEEECCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCEECCEEEEECCCCEEEE WAEGGAVLKASVADTAGNWGPLQTLTEHLNSLAGQLPPLVIDGAGNVTAAWQDMGTVNSS EECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEHHCCCCCCC DVIASSYRNGTWTATTFGQNPQSSSWPALAVNAAGSMALIWQNASLDVGPQLQTSFYTPG CHHHHHCCCCEEEEEECCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCEECCCCCC R C >Mature Secondary Structure MNWPLSACGGDDGSTTGSASSSGSSSSAGGVTTSGGTSQTQAGWSQVAALDGKTLAFEPS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHCHHHHEEECCCEEEECCC TTIDANGDTLVTWMTNGPAGGVGNEMWGSRYVPGAGWSTATRLDTGDGTHAMTGPGTIQP CEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCCC QLVGNAAGQAVAFWTEWMPGPNTYALWARPFSPSAGWGTPYEVAPDVTSSTYTAGIDGQG EEECCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCC NALVAFPQSISLLDSRIAWTRYTPDGTWSATAQIQMPSQTGPGAVTGDTTNVRPMISVLS CEEEECCCCHHHHHCCCEEEEECCCCCEEEEEEEEECCCCCCCCEECCCCCHHHHHHHHC SGSAVLAWGQTNGTQSAIWTATYDASNGWTNVAPAVTNTSLFTNIDAPTAGMDAKGNITL CCCEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCEECCEEEEECCCCCCCCCCCCCEEE VWGQLDVANGKIMTTTMSQRYVAGTGWQTAKPVAPEITEASGFIAKPMLAVSENGAAGVM EEEEEEECCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCEECCEEEEECCCCEEEE WAEGGAVLKASVADTAGNWGPLQTLTEHLNSLAGQLPPLVIDGAGNVTAAWQDMGTVNSS EECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEHHCCCCCCC DVIASSYRNGTWTATTFGQNPQSSSWPALAVNAAGSMALIWQNASLDVGPQLQTSFYTPG CHHHHHCCCCEEEEEECCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCEECCCCCC R C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA