| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024085
Identifier: 238024085
GI number: 238024085
Start: 775858
End: 777003
Strand: Direct
Name: 238024085
Synonym: bglu_2g06470
Alternate gene names: NA
Gene position: 775858-777003 (Clockwise)
Preceding gene: 238024083
Following gene: 238024086
Centisome position: 27.44
GC content: 61.69
Gene sequence:
>1146_bases ATGACATACCTCGACAACGATCTATCCAGTCTGGTTGGTCAGCTATACGACGCCTCTCTCGATAGCCGACAGTGGGCGGG AATGGCCTCGACGATCGCCGCAGCGTTCAATGGCAACAGCGCCGTCTTGAAGCTCCATGACGGCGCGAACGTGCAACTGC TGGAGACGACCGATAACCTGCAGGTACCACCGGCGCGCCTGGACTGGGCAACGCATTGGCACCAGAACGACCTTTGGGTT CATCGCGCGGTGGCCCGCAGCGTCGAGACGATTTTCACGGACCGCGATCTCGTCACGCCGCGCGAGCAGCGTGAAAGCGG CTTCTATCGGGAGTGGCTGCGCGAACTCGACATCTATCATGTGGTCGGCACGCTGTTTCCTGTAGGTAACGGTACGCTTG GTGTGCTGGGTGTCCACCGGCCCAAAGCGGCGCGGCATTTCAGTACCAGGGACCGTCATCGAGCCGCCTTCCTTCTTCCG CATCTCCGACGCGCTTTCCAGTTGAGTCAGCGCCTGTCTTCCCTCCAGCACGATGTCGCGCTGGAGGTGCTGAATCGCGT CGATACCGGCGTACTGGTCACGAATCAATCGTGCCAAGTGCTGTATGCGAACGCGATGGCGGAATATCTGCTCGGTTCGG GGCAGGCGATTCGTAGTCACGCCGGCCGTGTCCGCCTCAATCACGGTGCATTGCATGAGCGGCTGGTGCAGTTGATCCAG GCGTCGATGTCAACAGCGTCGGGCCGGGCCAAGGCGCTGGGCCCGATGTTGAGGGTGCCGCGTGCCGGCCGGCTGCCGCT GACATTGAGCGTCAGTCCGTTAAAGCCGAGCGGCCTGATCAAGACGGCTACACCGCTTGCCCTCGTGATGCTGCGCGATC CGGAATATCCGACCGCGAGCGTGCGCTATCTGCAAGAGTTGTTCGGCTTTACCCCGACCGAATCGGCCATTGCCGCCGAC CTCGCCATGGGGCTTTCGCTCGAAGAGATCGCCCGGCGCAAGGGTATCGGTATGGGAACCGTAAGGTCTCGTCTGAAACG AGTCCTTGCCAAGACGGGCACGAACCGACAGGCGGAAGTGGCGGTGCTGGTGGCGCGAAGCGTGGCCTTGTTCCGACCTG CGGAAAACACTTTCTCCCCCAAATGA
Upstream 100 bases:
>100_bases GAAACGGTCTGGGGTGCGGTGGGCATGGCGGCACTCGTTTTCGTCCAGGCTCGCGCAGCCCGACGCAACGGATCGCAAGC CCATCGGACAAGCAAGGCAT
Downstream 100 bases:
>100_bases GAGACGACAGGCGTCTTTGTCGCCGGTAATCTTGTGTCCGGTAAGAAGAACGTTGTTGTCGTGTCGCGTCGATAGATGAA AAGTCACTGACATCCACGAA
Product: LuxR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator LuxR Family; Regulatory Protein LuxR; Transcriptional Regulator; Transcriptional Regulator LuxR Family Protein; Response Regulator Receiver Domain-Containing Protein; CheY-Like Receiver; LuxR-Family Transcriptional Regulator; Two-Component Response Regulator Protein; Transcriptionat Regulator LuxR Family; Response Regulator Receiver Protein
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MTYLDNDLSSLVGQLYDASLDSRQWAGMASTIAAAFNGNSAVLKLHDGANVQLLETTDNLQVPPARLDWATHWHQNDLWV HRAVARSVETIFTDRDLVTPREQRESGFYREWLRELDIYHVVGTLFPVGNGTLGVLGVHRPKAARHFSTRDRHRAAFLLP HLRRAFQLSQRLSSLQHDVALEVLNRVDTGVLVTNQSCQVLYANAMAEYLLGSGQAIRSHAGRVRLNHGALHERLVQLIQ ASMSTASGRAKALGPMLRVPRAGRLPLTLSVSPLKPSGLIKTATPLALVMLRDPEYPTASVRYLQELFGFTPTESAIAAD LAMGLSLEEIARRKGIGMGTVRSRLKRVLAKTGTNRQAEVAVLVARSVALFRPAENTFSPK
Sequences:
>Translated_381_residues MTYLDNDLSSLVGQLYDASLDSRQWAGMASTIAAAFNGNSAVLKLHDGANVQLLETTDNLQVPPARLDWATHWHQNDLWV HRAVARSVETIFTDRDLVTPREQRESGFYREWLRELDIYHVVGTLFPVGNGTLGVLGVHRPKAARHFSTRDRHRAAFLLP HLRRAFQLSQRLSSLQHDVALEVLNRVDTGVLVTNQSCQVLYANAMAEYLLGSGQAIRSHAGRVRLNHGALHERLVQLIQ ASMSTASGRAKALGPMLRVPRAGRLPLTLSVSPLKPSGLIKTATPLALVMLRDPEYPTASVRYLQELFGFTPTESAIAAD LAMGLSLEEIARRKGIGMGTVRSRLKRVLAKTGTNRQAEVAVLVARSVALFRPAENTFSPK >Mature_380_residues TYLDNDLSSLVGQLYDASLDSRQWAGMASTIAAAFNGNSAVLKLHDGANVQLLETTDNLQVPPARLDWATHWHQNDLWVH RAVARSVETIFTDRDLVTPREQRESGFYREWLRELDIYHVVGTLFPVGNGTLGVLGVHRPKAARHFSTRDRHRAAFLLPH LRRAFQLSQRLSSLQHDVALEVLNRVDTGVLVTNQSCQVLYANAMAEYLLGSGQAIRSHAGRVRLNHGALHERLVQLIQA SMSTASGRAKALGPMLRVPRAGRLPLTLSVSPLKPSGLIKTATPLALVMLRDPEYPTASVRYLQELFGFTPTESAIAADL AMGLSLEEIARRKGIGMGTVRSRLKRVLAKTGTNRQAEVAVLVARSVALFRPAENTFSPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42027; Mature: 41896
Theoretical pI: Translated: 10.71; Mature: 10.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYLDNDLSSLVGQLYDASLDSRQWAGMASTIAAAFNGNSAVLKLHDGANVQLLETTDNL CCCCCHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHCCCCEEEEEEECCCCEEEEECCCCC QVPPARLDWATHWHQNDLWVHRAVARSVETIFTDRDLVTPREQRESGFYREWLRELDIYH CCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHH VVGTLFPVGNGTLGVLGVHRPKAARHFSTRDRHRAAFLLPHLRRAFQLSQRLSSLQHDVA HHHHHHCCCCCCEEEEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEVLNRVDTGVLVTNQSCQVLYANAMAEYLLGSGQAIRSHAGRVRLNHGALHERLVQLIQ HHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCHHHHHCCCEEEECHHHHHHHHHHHHH ASMSTASGRAKALGPMLRVPRAGRLPLTLSVSPLKPSGLIKTATPLALVMLRDPEYPTAS HHHHHCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEECCCCEEEEEEECCCCCHHH VRYLQELFGFTPTESAIAADLAMGLSLEEIARRKGIGMGTVRSRLKRVLAKTGTNRQAEV HHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHH AVLVARSVALFRPAENTFSPK HHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure TYLDNDLSSLVGQLYDASLDSRQWAGMASTIAAAFNGNSAVLKLHDGANVQLLETTDNL CCCCHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHCCCCEEEEEEECCCCEEEEECCCCC QVPPARLDWATHWHQNDLWVHRAVARSVETIFTDRDLVTPREQRESGFYREWLRELDIYH CCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHH VVGTLFPVGNGTLGVLGVHRPKAARHFSTRDRHRAAFLLPHLRRAFQLSQRLSSLQHDVA HHHHHHCCCCCCEEEEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEVLNRVDTGVLVTNQSCQVLYANAMAEYLLGSGQAIRSHAGRVRLNHGALHERLVQLIQ HHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCHHHHHCCCEEEECHHHHHHHHHHHHH ASMSTASGRAKALGPMLRVPRAGRLPLTLSVSPLKPSGLIKTATPLALVMLRDPEYPTAS HHHHHCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEECCCCEEEEEEECCCCCHHH VRYLQELFGFTPTESAIAADLAMGLSLEEIARRKGIGMGTVRSRLKRVLAKTGTNRQAEV HHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHH AVLVARSVALFRPAENTFSPK HHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA