| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024052
Identifier: 238024052
GI number: 238024052
Start: 737247
End: 738176
Strand: Direct
Name: 238024052
Synonym: bglu_2g06120
Alternate gene names: NA
Gene position: 737247-738176 (Clockwise)
Preceding gene: 238024051
Following gene: 238024053
Centisome position: 26.08
GC content: 73.01
Gene sequence:
>930_bases ATGAACCATGACGTGATAGTGACCTGCGCAGTGACGGGCGCCGGCGACACGGTCGGCCGGCACCCCGCGATTCCGGTCAC GCCCAGGCAGATCGCCGAGGCGGCGATCGAGGCGGCGAAGGCCGGCGCGACGGTGGCGCACTGCCATGTGCGCGACCCGC GCACCGGGCGCGGCAGCCGCGATCCGAACCTGTACCGCGAGGTGGTGGACCGGATCCGCGCGGCCGACGTCGACGTGATC ATCAATCTGACGGCCGGCATGGGCGGCGATCTCGAGATCGGCCCGGGCGAGGCGCCGCTGCAGTTCGGGCAGGGCACCGA CCTGGTGGGCGGCCTCGCGCGGCTGGTGCACGTGGAGGAGCTGCTGCCCGAGATCTGCACGCTCGACTGCGGTACGCTCA ACTTCGGCGACGGCGACACCATCTACGTCTCCACGCCGGCGCAACTGCGCGCCGGCGCGCAGCGGATCCAGCAGCTCGGC GTGAAGCCGGAGCTCGAGATCTTCGACACCGGCCACCTGTGGTTCGCCACGCAGATGCTCAAGGAAGGGCTGCTCGACGC GCCGCCGCTGTTCCAGCTCTGCCTCGGCATTCCGTGGGGCGCGCCGGCCGACACCGGCACCATGAAGGCGATGGTCGACA ACATGCCGCCCGGGGCGCACTGGGCCGGCTTCGGCATCGGCCGCATGCAGATGCCGATGGTGGCCCAGGCGATGCTGCTG GGCGGCCACGTGCGCGTGGGCCTGGAGGACAACCTCTGGCTCGAGCGCGGCGTACCGGCCTCGAACGGCTCGCTGGTGCA GCGCGCGCGCGAAATCGTCGAGCGGCTCGGCGGCCGCGTGCTGACGCCGGCCGAGGGCCGCGCGAAGCTGGGCCTGCCGC CGCGCGGGGCGCGCGCGCTCGAACGGCGCGCGCCCGCCGTCTACGCGTGA
Upstream 100 bases:
>100_bases GAAGGCCGCGCTCGGCCCCTGACGCGGGCCGGCGCCGGCGGCCCGCCCTTTCCCTAGCGAACGGACGCGCGGCGTCCACG CAACCCATGAGGCGAACACC
Downstream 100 bases:
>100_bases CGCATGCGCCGGGCGGCGCCGCTCGCGGTGCCCGGCAATCCGTCATCACCTCATCGGGACAACGAAGGACGATCATTCAT GACCTTGCTTACCGACATCA
Product: methionyl-tRNA synthetase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MNHDVIVTCAVTGAGDTVGRHPAIPVTPRQIAEAAIEAAKAGATVAHCHVRDPRTGRGSRDPNLYREVVDRIRAADVDVI INLTAGMGGDLEIGPGEAPLQFGQGTDLVGGLARLVHVEELLPEICTLDCGTLNFGDGDTIYVSTPAQLRAGAQRIQQLG VKPELEIFDTGHLWFATQMLKEGLLDAPPLFQLCLGIPWGAPADTGTMKAMVDNMPPGAHWAGFGIGRMQMPMVAQAMLL GGHVRVGLEDNLWLERGVPASNGSLVQRAREIVERLGGRVLTPAEGRAKLGLPPRGARALERRAPAVYA
Sequences:
>Translated_309_residues MNHDVIVTCAVTGAGDTVGRHPAIPVTPRQIAEAAIEAAKAGATVAHCHVRDPRTGRGSRDPNLYREVVDRIRAADVDVI INLTAGMGGDLEIGPGEAPLQFGQGTDLVGGLARLVHVEELLPEICTLDCGTLNFGDGDTIYVSTPAQLRAGAQRIQQLG VKPELEIFDTGHLWFATQMLKEGLLDAPPLFQLCLGIPWGAPADTGTMKAMVDNMPPGAHWAGFGIGRMQMPMVAQAMLL GGHVRVGLEDNLWLERGVPASNGSLVQRAREIVERLGGRVLTPAEGRAKLGLPPRGARALERRAPAVYA >Mature_309_residues MNHDVIVTCAVTGAGDTVGRHPAIPVTPRQIAEAAIEAAKAGATVAHCHVRDPRTGRGSRDPNLYREVVDRIRAADVDVI INLTAGMGGDLEIGPGEAPLQFGQGTDLVGGLARLVHVEELLPEICTLDCGTLNFGDGDTIYVSTPAQLRAGAQRIQQLG VKPELEIFDTGHLWFATQMLKEGLLDAPPLFQLCLGIPWGAPADTGTMKAMVDNMPPGAHWAGFGIGRMQMPMVAQAMLL GGHVRVGLEDNLWLERGVPASNGSLVQRAREIVERLGGRVLTPAEGRAKLGLPPRGARALERRAPAVYA
Specific function: Unknown
COG id: COG3246
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32793; Mature: 32793
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHDVIVTCAVTGAGDTVGRHPAIPVTPRQIAEAAIEAAKAGATVAHCHVRDPRTGRGSR CCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCC DPNLYREVVDRIRAADVDVIINLTAGMGGDLEIGPGEAPLQFGQGTDLVGGLARLVHVEE CHHHHHHHHHHHHHCCEEEEEEEECCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHH LLPEICTLDCGTLNFGDGDTIYVSTPAQLRAGAQRIQQLGVKPELEIFDTGHLWFATQML HHHHHHCCCCCCEECCCCCEEEEECCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHH KEGLLDAPPLFQLCLGIPWGAPADTGTMKAMVDNMPPGAHWAGFGIGRMQMPMVAQAMLL HHCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH GGHVRVGLEDNLWLERGVPASNGSLVQRAREIVERLGGRVLTPAEGRAKLGLPPRGARAL CCEEEECCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCEEECCCCCCEECCCCCCCHHHH ERRAPAVYA HHCCCCCCC >Mature Secondary Structure MNHDVIVTCAVTGAGDTVGRHPAIPVTPRQIAEAAIEAAKAGATVAHCHVRDPRTGRGSR CCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCC DPNLYREVVDRIRAADVDVIINLTAGMGGDLEIGPGEAPLQFGQGTDLVGGLARLVHVEE CHHHHHHHHHHHHHCCEEEEEEEECCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHH LLPEICTLDCGTLNFGDGDTIYVSTPAQLRAGAQRIQQLGVKPELEIFDTGHLWFATQML HHHHHHCCCCCCEECCCCCEEEEECCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHH KEGLLDAPPLFQLCLGIPWGAPADTGTMKAMVDNMPPGAHWAGFGIGRMQMPMVAQAMLL HHCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH GGHVRVGLEDNLWLERGVPASNGSLVQRAREIVERLGGRVLTPAEGRAKLGLPPRGARAL CCEEEECCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCEEECCCCCCEECCCCCCCHHHH ERRAPAVYA HHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA