Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is opuAC [H]

Identifier: 238024037

GI number: 238024037

Start: 710882

End: 711745

Strand: Direct

Name: opuAC [H]

Synonym: bglu_2g05910

Alternate gene names: 238024037

Gene position: 710882-711745 (Clockwise)

Preceding gene: 238024036

Following gene: 238024038

Centisome position: 25.14

GC content: 66.67

Gene sequence:

>864_bases
ATGAAGTTCATCGGAAAGCTGGCCTGGTGCGGCGCGTTCGCCGCGCTGCTGACGGTTTGTTCCCCCGCATCCGCCGACAC
CAAGCCGACGCTGAAGATCGGCTACGTGGAGGGCTGGGACGACAGCGTCGCGACCACCAACGTCGCCGCGCAGATCATCG
AGAAGAAACTCGGCTATCCGGTGCAGCTGGTGCCGGTGGCCGCGGGCGTGATGTGGCAGGGCGTGGCACGCGGCGACCTC
GACGCGACGCTGTCGGCCTGGCTGCCCGTCACGCACGGCGCATACTGGGATCAGTTCAAGACCAAGGTGGTCGATCTCGG
CACCAACTACCCGGGCGCGAAGATCGGCCTGATCGTGCCGACCTATGTGAAGGCCAAGAGCATCGCCGACCTGGAAGGCG
AGAAGGCCGACTTCGGCGCCCGCATCGTTGGGATCGACGCCGGCGCGGGCGTGATGCGCAAGACCGACGATGCGATCAAG
GCCTACGGCCTCGGCTATACGCTGATGGCCAGCTCCGGCAGCGCGATGACGGCCGAGCTGGCGCGCGCCGAGAACGCCAA
GAAGCCGATCGTGGTGACCGGCTGGGTGCCGCACTGGATGTTCGCGAAGTGGGACCTGCGCTTCCTCGACGATCCGAAGA
AGGTGTACGGCGATGCCGAGCACGTGGACAGCGTCGCGAACCCGGCGCTGGAAACCAAGGCCAAGCCGGTGGTGGCGTTC
CTGAAGAAATTCCAATGGAAGCCGGGCGAGCTCGATTCGGTGATGCTCGCCATCCAGGGCGGCGCGAAGCCTGACGTGGC
CGCCGGGAAGTGGATCGCGGCGCATGGCGAACGCGTGAAGGCCTGGACCGACGGCGCGCAGTAG

Upstream 100 bases:

>100_bases
CGGAAAACGACGATACCGGGGAATTGTGGCCGCGGAACCTAGAGACACCCCAATCAGACATGCCCTCGGCATGCCCACGA
CCACCCCAAGGAGATCGACC

Downstream 100 bases:

>100_bases
GCCGCAAAGCGGCACGATTGCGCCGCTGCTGAGGAAGGCGAAGTAAAAATGCCCGTCCGACCGGGGGTCGGACGGGCTTC
GTTTTTTGAAAAACCGCATG

Product: proline/glycine betaine ABC transporter periplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MKFIGKLAWCGAFAALLTVCSPASADTKPTLKIGYVEGWDDSVATTNVAAQIIEKKLGYPVQLVPVAAGVMWQGVARGDL
DATLSAWLPVTHGAYWDQFKTKVVDLGTNYPGAKIGLIVPTYVKAKSIADLEGEKADFGARIVGIDAGAGVMRKTDDAIK
AYGLGYTLMASSGSAMTAELARAENAKKPIVVTGWVPHWMFAKWDLRFLDDPKKVYGDAEHVDSVANPALETKAKPVVAF
LKKFQWKPGELDSVMLAIQGGAKPDVAAGKWIAAHGERVKAWTDGAQ

Sequences:

>Translated_287_residues
MKFIGKLAWCGAFAALLTVCSPASADTKPTLKIGYVEGWDDSVATTNVAAQIIEKKLGYPVQLVPVAAGVMWQGVARGDL
DATLSAWLPVTHGAYWDQFKTKVVDLGTNYPGAKIGLIVPTYVKAKSIADLEGEKADFGARIVGIDAGAGVMRKTDDAIK
AYGLGYTLMASSGSAMTAELARAENAKKPIVVTGWVPHWMFAKWDLRFLDDPKKVYGDAEHVDSVANPALETKAKPVVAF
LKKFQWKPGELDSVMLAIQGGAKPDVAAGKWIAAHGERVKAWTDGAQ
>Mature_287_residues
MKFIGKLAWCGAFAALLTVCSPASADTKPTLKIGYVEGWDDSVATTNVAAQIIEKKLGYPVQLVPVAAGVMWQGVARGDL
DATLSAWLPVTHGAYWDQFKTKVVDLGTNYPGAKIGLIVPTYVKAKSIADLEGEKADFGARIVGIDAGAGVMRKTDDAIK
AYGLGYTLMASSGSAMTAELARAENAKKPIVVTGWVPHWMFAKWDLRFLDDPKKVYGDAEHVDSVANPALETKAKPVVAF
LKKFQWKPGELDSVMLAIQGGAKPDVAAGKWIAAHGERVKAWTDGAQ

Specific function: Involved in a multicomponent binding-protein-dependent transport system for glycine betaine [H]

COG id: COG2113

COG function: function code E; ABC-type proline/glycine betaine transport systems, periplasmic components

Gene ontology:

Cell location: Cell membrane; Lipid-anchor [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 30664; Mature: 30664

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFIGKLAWCGAFAALLTVCSPASADTKPTLKIGYVEGWDDSVATTNVAAQIIEKKLGYP
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCC
VQLVPVAAGVMWQGVARGDLDATLSAWLPVTHGAYWDQFKTKVVDLGTNYPGAKIGLIVP
EEEEEHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHEEEECCCCCCCCEEEEEEC
TYVKAKSIADLEGEKADFGARIVGIDAGAGVMRKTDDAIKAYGLGYTLMASSGSAMTAEL
CHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHCCCHHHHHHCCCEEEEECCCCHHHHHH
ARAENAKKPIVVTGWVPHWMFAKWDLRFLDDPKKVYGDAEHVDSVANPALETKAKPVVAF
HHHCCCCCCEEEECCCCCCEEEEECEEECCCHHHHCCCHHHHHHHHCCHHHHCCHHHHHH
LKKFQWKPGELDSVMLAIQGGAKPDVAAGKWIAAHGERVKAWTDGAQ
HHHHCCCCCCCCEEEEEEECCCCCCCCCCCEEECCCCEEEEECCCCC
>Mature Secondary Structure
MKFIGKLAWCGAFAALLTVCSPASADTKPTLKIGYVEGWDDSVATTNVAAQIIEKKLGYP
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCC
VQLVPVAAGVMWQGVARGDLDATLSAWLPVTHGAYWDQFKTKVVDLGTNYPGAKIGLIVP
EEEEEHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHEEEECCCCCCCCEEEEEEC
TYVKAKSIADLEGEKADFGARIVGIDAGAGVMRKTDDAIKAYGLGYTLMASSGSAMTAEL
CHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHCCCHHHHHHCCCEEEEECCCCHHHHHH
ARAENAKKPIVVTGWVPHWMFAKWDLRFLDDPKKVYGDAEHVDSVANPALETKAKPVVAF
HHHCCCCCCEEEECCCCCCEEEEECEEECCCHHHHCCCHHHHHHHHCCHHHHCCHHHHHH
LKKFQWKPGELDSVMLAIQGGAKPDVAAGKWIAAHGERVKAWTDGAQ
HHHHCCCCCCCCEEEEEEECCCCCCCCCCCEEECCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7622480; 8969502; 9384377 [H]