| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is yeaW [H]
Identifier: 238024035
GI number: 238024035
Start: 708323
End: 709564
Strand: Direct
Name: yeaW [H]
Synonym: bglu_2g05890
Alternate gene names: 238024035
Gene position: 708323-709564 (Clockwise)
Preceding gene: 238024034
Following gene: 238024036
Centisome position: 25.05
GC content: 65.86
Gene sequence:
>1242_bases ATGAATCAAACGGCAGACATTCGTGCGCTGGTGGCGCGCCGCCAAGCGGGTTACAGCCTGGAAGCCCCGTTCTATCTGAG CGAGGAGATCTTCCGGCTCGACATGGAGGCGATCTTCCGCAGGCACTGGATTCAGGTCGCGATCGAGCCGGACGTGCCGG AGCCGGGCGATTACGTGACGGTCGAGCTGGGCAGCGACTCGATCCTGATCGTGCGCGACGACGACATGGAAATCCGCGCG TTCCACAACGTGTGCCGTCACCGCGGCGCGCGCCTGTGCAACGAGGACAAGGGCTCGGTGGGCAACATCGTCTGCCCGTA CCACAGCTGGACCTACAACCTGAGCGGCGCGCTGATGTTCGCCGAGCACATGGGCGAGAAGTTCGACCGCTGCAAGCACA GCCTGAAGCCGGTGCATCTGCAGAACCTGGGCGGCCTGCTGTTCGTCTGCCTCGCCGAGGAGCCGCCCGCCGATTTCGCG ACGCTGCGCGCGGCGATGGAGCCGTACCTGCTGCCGCACGATCTGCCGAACACCAAGATCGCCGCGCAGGTCGACATCAT CGAGGAAGGCAACTGGAAGCTGACGATGGAGAACAATCGCGAGTGCTATCACTGCGTCGCGAACCATCCGGAGCTGACCA TCTCGCTGTACGAATACGGCTTCGGCTACCAGCCCTCGCCGGCCACCGCCGAGGGCATGGCCGCGTTCGAGCGCACCTGC GTGGAGCGCGAGCAGCAGTGGGGCGAGCTGGGCCTGCCGTCGGTGGAGGTCGAGCGCCTGCTCGACGTCACCGGCTTTCG CACCCAGCGCCTGCCGCTGGACCGCAGCGGCGAATCGCAGACGCTCGACGCGAAGGTCGCCTCGAAGAAGCTGCTCGGCG AATTCCAGCGCGCCGACCTCGGCGGCCTGTCGTTCTGGACCCAGCCGAACTCGTGGCACCACTTCATGAGCGACCACATC GTGACGTTCTCGGTGATCCCGCTGTCGGCGGGCAAGACGCTGGTGCGCACCAAGTGGCTGGTGCACAAGGACGCCAAGGA AGGCATCGATTACGACGTGAAGAACCTGACCGCCGTGTGGAACGCCACCAACGACCAGGACCGCGCGCTCGTCGAGTTCT CGCAGCGCGGCGCGGCCAGCAGCGCCTACCAGCCGGGCCCGTATTCGCCGTACACGGAAGGGCTGGTCGAGAAGTTCTCG GCCTGGTACATCGGCCGCATGGCCGCCTATCTGGGCGCTTGA
Upstream 100 bases:
>100_bases CAAGTGATCCTGGCGTATTTGCGCGAGCATCAACTGATCGATTACTGACATCCGGCCCGTGCCGGTCGGCAGGAAACAAG GATAGAGTCCGGAGCAAACG
Downstream 100 bases:
>100_bases CGCGACGCGGAGCGAGACATGATGCGAGATGCCGCCAATTTCGAACCGGTGGACAGCCGCGTGACGCAGCCCGATTTCTG GCGCGCGCTGCCCGAGCGCT
Product: Iron-sulfur cluster-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 413; Mature: 413
Protein sequence:
>413_residues MNQTADIRALVARRQAGYSLEAPFYLSEEIFRLDMEAIFRRHWIQVAIEPDVPEPGDYVTVELGSDSILIVRDDDMEIRA FHNVCRHRGARLCNEDKGSVGNIVCPYHSWTYNLSGALMFAEHMGEKFDRCKHSLKPVHLQNLGGLLFVCLAEEPPADFA TLRAAMEPYLLPHDLPNTKIAAQVDIIEEGNWKLTMENNRECYHCVANHPELTISLYEYGFGYQPSPATAEGMAAFERTC VEREQQWGELGLPSVEVERLLDVTGFRTQRLPLDRSGESQTLDAKVASKKLLGEFQRADLGGLSFWTQPNSWHHFMSDHI VTFSVIPLSAGKTLVRTKWLVHKDAKEGIDYDVKNLTAVWNATNDQDRALVEFSQRGAASSAYQPGPYSPYTEGLVEKFS AWYIGRMAAYLGA
Sequences:
>Translated_413_residues MNQTADIRALVARRQAGYSLEAPFYLSEEIFRLDMEAIFRRHWIQVAIEPDVPEPGDYVTVELGSDSILIVRDDDMEIRA FHNVCRHRGARLCNEDKGSVGNIVCPYHSWTYNLSGALMFAEHMGEKFDRCKHSLKPVHLQNLGGLLFVCLAEEPPADFA TLRAAMEPYLLPHDLPNTKIAAQVDIIEEGNWKLTMENNRECYHCVANHPELTISLYEYGFGYQPSPATAEGMAAFERTC VEREQQWGELGLPSVEVERLLDVTGFRTQRLPLDRSGESQTLDAKVASKKLLGEFQRADLGGLSFWTQPNSWHHFMSDHI VTFSVIPLSAGKTLVRTKWLVHKDAKEGIDYDVKNLTAVWNATNDQDRALVEFSQRGAASSAYQPGPYSPYTEGLVEKFS AWYIGRMAAYLGA >Mature_413_residues MNQTADIRALVARRQAGYSLEAPFYLSEEIFRLDMEAIFRRHWIQVAIEPDVPEPGDYVTVELGSDSILIVRDDDMEIRA FHNVCRHRGARLCNEDKGSVGNIVCPYHSWTYNLSGALMFAEHMGEKFDRCKHSLKPVHLQNLGGLLFVCLAEEPPADFA TLRAAMEPYLLPHDLPNTKIAAQVDIIEEGNWKLTMENNRECYHCVANHPELTISLYEYGFGYQPSPATAEGMAAFERTC VEREQQWGELGLPSVEVERLLDVTGFRTQRLPLDRSGESQTLDAKVASKKLLGEFQRADLGGLSFWTQPNSWHHFMSDHI VTFSVIPLSAGKTLVRTKWLVHKDAKEGIDYDVKNLTAVWNATNDQDRALVEFSQRGAASSAYQPGPYSPYTEGLVEKFS AWYIGRMAAYLGA
Specific function: Unknown
COG id: COG4638
COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Rieske domain [H]
Homologues:
Organism=Escherichia coli, GI1788103, Length=213, Percent_Identity=34.2723004694836, Blast_Score=120, Evalue=2e-28, Organism=Escherichia coli, GI1788888, Length=96, Percent_Identity=39.5833333333333, Blast_Score=95, Evalue=9e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017941 - InterPro: IPR015881 - InterPro: IPR001663 [H]
Pfam domain/function: PF00355 Rieske [H]
EC number: 1.14.1.- [C]
Molecular weight: Translated: 46609; Mature: 46609
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: PS00290 IG_MHC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQTADIRALVARRQAGYSLEAPFYLSEEIFRLDMEAIFRRHWIQVAIEPDVPEPGDYVT CCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCEEE VELGSDSILIVRDDDMEIRAFHNVCRHRGARLCNEDKGSVGNIVCPYHSWTYNLSGALMF EEECCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCEEECCCHHHHH AEHMGEKFDRCKHSLKPVHLQNLGGLLFVCLAEEPPADFATLRAAMEPYLLPHDLPNTKI HHHHHHHHHHHHHCCCCEEHHCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCEE AAQVDIIEEGNWKLTMENNRECYHCVANHPELTISLYEYGFGYQPSPATAEGMAAFERTC EEEEEEEECCCEEEEECCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHH VEREQQWGELGLPSVEVERLLDVTGFRTQRLPLDRSGESQTLDAKVASKKLLGEFQRADL HHHHHHHCCCCCCHHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC GGLSFWTQPNSWHHFMSDHIVTFSVIPLSAGKTLVRTKWLVHKDAKEGIDYDVKNLTAVW CCCEEECCCCCHHHHHCCCEEEEEEEEECCCCHHHHHHHHEECCHHCCCCCCHHHEEEEE NATNDQDRALVEFSQRGAASSAYQPGPYSPYTEGLVEKFSAWYIGRMAAYLGA CCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNQTADIRALVARRQAGYSLEAPFYLSEEIFRLDMEAIFRRHWIQVAIEPDVPEPGDYVT CCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCEEE VELGSDSILIVRDDDMEIRAFHNVCRHRGARLCNEDKGSVGNIVCPYHSWTYNLSGALMF EEECCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCEEECCCHHHHH AEHMGEKFDRCKHSLKPVHLQNLGGLLFVCLAEEPPADFATLRAAMEPYLLPHDLPNTKI HHHHHHHHHHHHHCCCCEEHHCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCEE AAQVDIIEEGNWKLTMENNRECYHCVANHPELTISLYEYGFGYQPSPATAEGMAAFERTC EEEEEEEECCCEEEEECCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHH VEREQQWGELGLPSVEVERLLDVTGFRTQRLPLDRSGESQTLDAKVASKKLLGEFQRADL HHHHHHHCCCCCCHHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC GGLSFWTQPNSWHHFMSDHIVTFSVIPLSAGKTLVRTKWLVHKDAKEGIDYDVKNLTAVW CCCEEECCCCCHHHHHCCCEEEEEEEEECCCCHHHHHHHHEECCHHCCCCCCHHHEEEEE NATNDQDRALVEFSQRGAASSAYQPGPYSPYTEGLVEKFSAWYIGRMAAYLGA CCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]