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The map label for this gene is rhaR [C]

Identifier: 238023962

GI number: 238023962

Start: 612954

End: 613871

Strand: Reverse

Name: rhaR [C]

Synonym: bglu_2g05120

Alternate gene names: 238023962

Gene position: 613871-612954 (Counterclockwise)

Preceding gene: 238023974

Following gene: 238023958

Centisome position: 21.71

GC content: 68.95

Gene sequence:

>918_bases
ATGTCGCCTGTTGCCGATACCGTCAGCGCCGCCGCTGCGCCGGCCCCGAGGGATACGCTCGGCTGCCTGTCGAGCAAGCT
GCGCAAGAATCTGCAGTTCCAGAGCGGCGATTTCATGTTCCATCGCAAATGCATGGACACGCCGCAGCTCGAGCGCGTGA
CGATGCCGGCCAGCGACCGCGGGTTCCTGGTCGGCATTTCGCTACGCGCGGGGCACCATCGCAGGAACTTCCGCGGCCCG
CGCGCGGAGGATTGCCACTTCGATCGGCATTCGATTTATATTCGCGATTTTTCAGAGAATTACGTCGCCGATCTTTACGG
CAATTTCGATTTCCTGCTGCTCGAATTATCGTCGCGGTTTCTGGTTCGGCTCAGCGACGAGCACCAGGCCCCCGCGATCG
ACGGCCTGCTCTGCGCGGCCGCGGTGGCCGACCCGGTGCTCGGCCACCTGGGCGCCGCGATCGCGGCCGGCATCGAGACG
CCGGGCGAACTCGGCGCGCGCTTCGTCGAGCAGGTCGGGCTGGCGATCGGCCTGCATCTCGCGCAGCGCTATGGCAGCCT
GCCGCCGCGCGAGGCGCGCCTGAAGGGCCGGCTCAGCGCCGCGCAAGAGGCGCGCGCCAAGGAGCTGCTGATGCTGCGCG
ACCACCCCCGCTCGTCGCTGGCCGACATCGCGCGCGAATGCAAGCTGTCGCGCAGCTACTTCATCCGCGCGTTCGCCCGT
ACCACCGGCCGCACGCCGCATCAGTGGCTGCTGGAACAGCGCACCGCGCAGGCGCGCGGCATGATCGAGAGCACGCGCCT
GCCGCTCGCCGACATCGCGATCGCCTGCGGCTTCTCGGACCAGAGCCACCTGAGCCGCGTGTTCGCGAAGGCGCTCGGCG
TGACGCCGGGCGCATGGCGGCGCGGCGGGGGGCACTGA

Upstream 100 bases:

>100_bases
ATCGCCATGCCAGCCGGCACCCGTCACGCCCGCGCCGCCGCGGCGGCGCCCACGTCTGGCGCCGCCCCGCGCGCGCCTTT
TCTGCGGAGGAAACCGCCCG

Downstream 100 bases:

>100_bases
CGCGGCGGGCAGTCCGCCGAAGCCGGCACCGCGGCCGGGCGCGCCGCGCCCCCCGAACGGGCCAGCGGGCCGCGCGGGTG
CGGCAGCAGGCGTGGCGGTA

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator AraC Family; Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator AraC Family Protein; Transcriptional Regulator Protein; AraC Family Transcription Regulator; AraC-Family Transcriptional Regulator; AraC Family Regulatory Protein; Transcription Regulator Protein; Helix-Turn-Helix- Domain Containing Protein AraC Type; AraC Family Transcription Regulator Protein; Transcriptional Regulator AraC; Transcriptional Regulator AraC-Type; Regulator; AraC Family Regulator; Transcriptional Activator; AraC/XylS Family Transcriptional Regulator; Transcriptional Regulatory Protein; Transcription Regulator AraC Family; AraC/XylS Family Transcription Factor; AraC Type Helix-Turn-Helix- Domain-Containing Protein; Helix-Turn-Helix AraC Type; AraC-Type Trancriptional Regulator; Transcriptional Regulator Protein AraC Family; Transcription Regulator; Xyls/AraC-Type Transcriptional Activator; AraC-Like Transcriptional Regulator

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MSPVADTVSAAAAPAPRDTLGCLSSKLRKNLQFQSGDFMFHRKCMDTPQLERVTMPASDRGFLVGISLRAGHHRRNFRGP
RAEDCHFDRHSIYIRDFSENYVADLYGNFDFLLLELSSRFLVRLSDEHQAPAIDGLLCAAAVADPVLGHLGAAIAAGIET
PGELGARFVEQVGLAIGLHLAQRYGSLPPREARLKGRLSAAQEARAKELLMLRDHPRSSLADIARECKLSRSYFIRAFAR
TTGRTPHQWLLEQRTAQARGMIESTRLPLADIAIACGFSDQSHLSRVFAKALGVTPGAWRRGGGH

Sequences:

>Translated_305_residues
MSPVADTVSAAAAPAPRDTLGCLSSKLRKNLQFQSGDFMFHRKCMDTPQLERVTMPASDRGFLVGISLRAGHHRRNFRGP
RAEDCHFDRHSIYIRDFSENYVADLYGNFDFLLLELSSRFLVRLSDEHQAPAIDGLLCAAAVADPVLGHLGAAIAAGIET
PGELGARFVEQVGLAIGLHLAQRYGSLPPREARLKGRLSAAQEARAKELLMLRDHPRSSLADIARECKLSRSYFIRAFAR
TTGRTPHQWLLEQRTAQARGMIESTRLPLADIAIACGFSDQSHLSRVFAKALGVTPGAWRRGGGH
>Mature_304_residues
SPVADTVSAAAAPAPRDTLGCLSSKLRKNLQFQSGDFMFHRKCMDTPQLERVTMPASDRGFLVGISLRAGHHRRNFRGPR
AEDCHFDRHSIYIRDFSENYVADLYGNFDFLLLELSSRFLVRLSDEHQAPAIDGLLCAAAVADPVLGHLGAAIAAGIETP
GELGARFVEQVGLAIGLHLAQRYGSLPPREARLKGRLSAAQEARAKELLMLRDHPRSSLADIARECKLSRSYFIRAFART
TGRTPHQWLLEQRTAQARGMIESTRLPLADIAIACGFSDQSHLSRVFAKALGVTPGAWRRGGGH

Specific function: Activator Of The L-Rhamnose Operon. Rhar Putatively Autoregulates Its Synthesis. [C]

COG id: COG2207

COG function: function code K; AraC-type DNA-binding domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33523; Mature: 33392

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPVADTVSAAAAPAPRDTLGCLSSKLRKNLQFQSGDFMFHRKCMDTPQLERVTMPASDR
CCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCEEECCCCCC
GFLVGISLRAGHHRRNFRGPRAEDCHFDRHSIYIRDFSENYVADLYGNFDFLLLELSSRF
CEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHCCHHHHHEEHHCHH
LVRLSDEHQAPAIDGLLCAAAVADPVLGHLGAAIAAGIETPGELGARFVEQVGLAIGLHL
EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
AQRYGSLPPREARLKGRLSAAQEARAKELLMLRDHPRSSLADIARECKLSRSYFIRAFAR
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
TTGRTPHQWLLEQRTAQARGMIESTRLPLADIAIACGFSDQSHLSRVFAKALGVTPGAWR
HCCCCHHHHHHHHHHHHHHCCHHHCCCCHHHHHEECCCCCHHHHHHHHHHHHCCCCCCCC
RGGGH
CCCCC
>Mature Secondary Structure 
SPVADTVSAAAAPAPRDTLGCLSSKLRKNLQFQSGDFMFHRKCMDTPQLERVTMPASDR
CCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCEEECCCCCC
GFLVGISLRAGHHRRNFRGPRAEDCHFDRHSIYIRDFSENYVADLYGNFDFLLLELSSRF
CEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHCCHHHHHEEHHCHH
LVRLSDEHQAPAIDGLLCAAAVADPVLGHLGAAIAAGIETPGELGARFVEQVGLAIGLHL
EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
AQRYGSLPPREARLKGRLSAAQEARAKELLMLRDHPRSSLADIARECKLSRSYFIRAFAR
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
TTGRTPHQWLLEQRTAQARGMIESTRLPLADIAIACGFSDQSHLSRVFAKALGVTPGAWR
HCCCCHHHHHHHHHHHHHHCCHHHCCCCHHHHHEECCCCCHHHHHHHHHHHHCCCCCCCC
RGGGH
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA