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The map label for this gene is 238023958

Identifier: 238023958

GI number: 238023958

Start: 607973

End: 609166

Strand: Reverse

Name: 238023958

Synonym: bglu_2g05080

Alternate gene names: NA

Gene position: 609166-607973 (Counterclockwise)

Preceding gene: 238023962

Following gene: 238023956

Centisome position: 21.55

GC content: 69.77

Gene sequence:

>1194_bases
ATGAAAAAACATTTCGCCGCGGCCTCGCTGCTGCTTCCACTCGCCACCGCCGCCTGGGCACAAAGTTCGGTCACGCTTTA
CGGCATCGTCGATGCCGGCCTCACCTACCGCAGCAATGAACGCACCGGCACCGGGCCGGCTGCGGTCGGCCATTCGAATC
TCGCGCTCGCGGGCGGCGCGCTGTCGGGCAGCCGCTGGGGCATCCGCGGCACCGAAATGCTCGGCGGCGGCTGGCGCGCG
ATCTTCACGCTCGAGAACGGCTTCGAACTCGCCAACGGCACCTCGCAGCAAGGCAACCGCCTGTTCGGCCGGCAGGCCTA
CGTCGGGCTCGGCCACGCGCGCTACGGGACGCTGACGCTGGGCCGCCAGTACACCTCGCTCGACGATTTCGTGAGCGGCG
TGTCGCCCGCGGGGCTCCTGGGCGGCTACGCGGCGCACCCGGGGGACATCGACGATCTCGATCAGACCGTGCGCGTCGAC
AATGCGGTCAAGTACACCAGCGTCAACTACGACGGCCTCTCGTTCGGCGCCATGTACGGCTTCGGCAACCAGGCGGGCAG
CATGAAGCGGCGCAGCACCTGGAGCGTGGCCGCGGCCTACGCGAACGGGCCGCTCAAGCTCGGCGCCGGCTTCGAGCGCG
CCGACAACGGCCGTGGCGGCCCGTTCGCCCCGGGCGGCGCCGGCTGGGACAGCAGCGACGACGGCACCTTCGGCTCGTCG
ATCAGCGAGGGCTTCGCGAGCGCGCAGACGCAGCAGATCGCCGCCGCCGGCGCGACCTGGGACTTCGGCCCGGTGCTGGT
GGGCGCCAACTACAGCAACGTGCAATACCGCGCGGGCGGCAATTCGCTATACCACGGCCACGCCACGTTCAATATCGCGG
GCCTCTTCACGCAGTGGAAGGTGGAGGCCAACACGCGCCTGTTCGCGGGCTACAGCTACACGCGGCGCGGCAACCTGGAC
GGCCTCGATGAAAGCGCGACGTACCACAACGCCACGCTCGGCGCGCTTTACGACCTCTCGAAGCGCACCACGGTCTATCT
GCTCGGTGCCTACCAGCACGCCTCGGGCATGACGCTCGACGTGTTCGGCCGGCCCACCGCCGCCACCGCGTCGGCCTCCG
ACAAGGCGAACGGCCATTCGGCGGCCACCCGCTCGCAGACCCTCGTCAGCATCGGCCTGCGCCAGCGCTTCTGA

Upstream 100 bases:

>100_bases
CGGCCGCATCGCCGGCGTCGTCTCCATACTCGCACGCGTTACCGGGCGGCCTCGCCTCCCGGCCACACGCCACAACGACC
CACCAAGCTCGGATCAGAAG

Downstream 100 bases:

>100_bases
CGAACGCGGGCCGCGCCGGCCGCCCGAGGCCGGCGCGTGCCCGGCCGGCGCGCGTTCAGCGGGACAGCGGCGCGCCCATC
TGCTCGCGCCCGGCCGGCGT

Product: outer membrane protein porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MKKHFAAASLLLPLATAAWAQSSVTLYGIVDAGLTYRSNERTGTGPAAVGHSNLALAGGALSGSRWGIRGTEMLGGGWRA
IFTLENGFELANGTSQQGNRLFGRQAYVGLGHARYGTLTLGRQYTSLDDFVSGVSPAGLLGGYAAHPGDIDDLDQTVRVD
NAVKYTSVNYDGLSFGAMYGFGNQAGSMKRRSTWSVAAAYANGPLKLGAGFERADNGRGGPFAPGGAGWDSSDDGTFGSS
ISEGFASAQTQQIAAAGATWDFGPVLVGANYSNVQYRAGGNSLYHGHATFNIAGLFTQWKVEANTRLFAGYSYTRRGNLD
GLDESATYHNATLGALYDLSKRTTVYLLGAYQHASGMTLDVFGRPTAATASASDKANGHSAATRSQTLVSIGLRQRF

Sequences:

>Translated_397_residues
MKKHFAAASLLLPLATAAWAQSSVTLYGIVDAGLTYRSNERTGTGPAAVGHSNLALAGGALSGSRWGIRGTEMLGGGWRA
IFTLENGFELANGTSQQGNRLFGRQAYVGLGHARYGTLTLGRQYTSLDDFVSGVSPAGLLGGYAAHPGDIDDLDQTVRVD
NAVKYTSVNYDGLSFGAMYGFGNQAGSMKRRSTWSVAAAYANGPLKLGAGFERADNGRGGPFAPGGAGWDSSDDGTFGSS
ISEGFASAQTQQIAAAGATWDFGPVLVGANYSNVQYRAGGNSLYHGHATFNIAGLFTQWKVEANTRLFAGYSYTRRGNLD
GLDESATYHNATLGALYDLSKRTTVYLLGAYQHASGMTLDVFGRPTAATASASDKANGHSAATRSQTLVSIGLRQRF
>Mature_397_residues
MKKHFAAASLLLPLATAAWAQSSVTLYGIVDAGLTYRSNERTGTGPAAVGHSNLALAGGALSGSRWGIRGTEMLGGGWRA
IFTLENGFELANGTSQQGNRLFGRQAYVGLGHARYGTLTLGRQYTSLDDFVSGVSPAGLLGGYAAHPGDIDDLDQTVRVD
NAVKYTSVNYDGLSFGAMYGFGNQAGSMKRRSTWSVAAAYANGPLKLGAGFERADNGRGGPFAPGGAGWDSSDDGTFGSS
ISEGFASAQTQQIAAAGATWDFGPVLVGANYSNVQYRAGGNSLYHGHATFNIAGLFTQWKVEANTRLFAGYSYTRRGNLD
GLDESATYHNATLGALYDLSKRTTVYLLGAYQHASGMTLDVFGRPTAATASASDKANGHSAATRSQTLVSIGLRQRF

Specific function: Forms anion selective channels [H]

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 41560; Mature: 41560

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKHFAAASLLLPLATAAWAQSSVTLYGIVDAGLTYRSNERTGTGPAAVGHSNLALAGGA
CCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCEEEECCCCCCCCCCCCCCCCEEEECCC
LSGSRWGIRGTEMLGGGWRAIFTLENGFELANGTSQQGNRLFGRQAYVGLGHARYGTLTL
CCCCCCCCCCCEEECCCEEEEEEEECCEEECCCCCCCCCEEECCEEEEECCCCEEEEEEE
GRQYTSLDDFVSGVSPAGLLGGYAAHPGDIDDLDQTVRVDNAVKYTSVNYDGLSFGAMYG
CCCCCCHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHEECCCCEEEEEECCCCEEEEEEEC
FGNQAGSMKRRSTWSVAAAYANGPLKLGAGFERADNGRGGPFAPGGAGWDSSDDGTFGSS
CCCCCCCCCCCCCEEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
ISEGFASAQTQQIAAAGATWDFGPVLVGANYSNVQYRAGGNSLYHGHATFNIAGLFTQWK
HHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEECCCEEEECCEEEEEEEEEEEEE
VEANTRLFAGYSYTRRGNLDGLDESATYHNATLGALYDLSKRTTVYLLGAYQHASGMTLD
EECCCEEEECCEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEEEEEEECCCCCEEE
VFGRPTAATASASDKANGHSAATRSQTLVSIGLRQRF
ECCCCCCCCCCCCCCCCCCCHHHHHHHHEEEHHHCCC
>Mature Secondary Structure
MKKHFAAASLLLPLATAAWAQSSVTLYGIVDAGLTYRSNERTGTGPAAVGHSNLALAGGA
CCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCEEEECCCCCCCCCCCCCCCCEEEECCC
LSGSRWGIRGTEMLGGGWRAIFTLENGFELANGTSQQGNRLFGRQAYVGLGHARYGTLTL
CCCCCCCCCCCEEECCCEEEEEEEECCEEECCCCCCCCCEEECCEEEEECCCCEEEEEEE
GRQYTSLDDFVSGVSPAGLLGGYAAHPGDIDDLDQTVRVDNAVKYTSVNYDGLSFGAMYG
CCCCCCHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHEECCCCEEEEEECCCCEEEEEEEC
FGNQAGSMKRRSTWSVAAAYANGPLKLGAGFERADNGRGGPFAPGGAGWDSSDDGTFGSS
CCCCCCCCCCCCCEEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
ISEGFASAQTQQIAAAGATWDFGPVLVGANYSNVQYRAGGNSLYHGHATFNIAGLFTQWK
HHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEECCCEEEECCEEEEEEEEEEEEE
VEANTRLFAGYSYTRRGNLDGLDESATYHNATLGALYDLSKRTTVYLLGAYQHASGMTLD
EECCCEEEECCEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEEEEEEECCCCCEEE
VFGRPTAATASASDKANGHSAATRSQTLVSIGLRQRF
ECCCCCCCCCCCCCCCCCCCHHHHHHHHEEEHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]