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The map label for this gene is glxA [H]

Identifier: 238023956

GI number: 238023956

Start: 605608

End: 606567

Strand: Reverse

Name: glxA [H]

Synonym: bglu_2g05060

Alternate gene names: 238023956

Gene position: 606567-605608 (Counterclockwise)

Preceding gene: 238023958

Following gene: 238023955

Centisome position: 21.45

GC content: 73.54

Gene sequence:

>960_bases
ATGAAGCCAGCCTACGAGCATGTCGATTTCGGCGCCGGCTGTTCGGTGCGGATCTACCACCGGCGGCTGCCGCGCATTCC
GTTCGAGTGGCACCACCATCCCGAATACGAGCTGACGCTGACGATGAACAGCCGCGGCAAGCGCTACATCGGCGATTCGG
TGGCCGCCTACGGCGACGACGACCTGGTGCTGGTGCCGCCCAACCTTCCGCACACCTGGGCGTCGAACCGCTCGATCGAG
GCAGGCAGCCCGCAGGTGGCGATCGTGATCTGGTTCGACGGTGCCTGGCTGCACCGGCTCGCCGACCTCTGTCCCGAACA
CAATGGCCTGCGCGACCTGCTGCGGCGCGCCGCCTGCGGGCTGCGCTTCGAGGACGGCGCCGGCACGCGCATGCGCGAGC
GGCTCGACGCGCTGCTGGCCGACGCGCCGCGCGAACGGCTCTGCGCGGTGCTGGACCTGCTGCATGCGCTGGCGGCCACG
CCGGCCGAGCCGCTCGCCACGCCGAGCGCGTTCGGCGCGGCGGCGGGCACGCTCGGCACTCACGCGCCCGAGCGGCTCGC
GCGCGTGCTCGCGCTGATCGACACGCAGTATGCAAGGCCGCTTCGGCTCGCCGCGCTCGCGAAGGCGGCCGGCCTGTCGG
AACGCACGCTGACCCGCCAGTTCGCGCGGCATCTGGGCGAGAGCGTGGGCCGCTACGTCACGCGCGTGCGGCTCGGCCAC
GCCTGCCGGCTGCTGGCCGATACGACGCTGCCGGTAGCGGTGATCGCCGAGCGCTCGGGGTTTCCGAGCGCCGCGCATTT
CAACCGGCAGTTCAAGGCTGCCCGCGGCGCGACGCCGGTGGCCTGGCGCCAGCAGTTCGCGCAGGCGCGCCGCGCCGAGG
CGCCGGCGCTGACCGAGCGCCCGCCGTCGCTGCGAACGCGCCCCCCCGCGCGCCCGGTAAAAGCGGTGCGGACGCGCTAG

Upstream 100 bases:

>100_bases
CCATGATGTCGTCTCCGAATGGTGTTGGGTGCTGCGCATCGTATGCCGGCGCGGCCCGCACCAGTGATACGATCCGGCCA
TTGTCACGATGGATACGGCC

Downstream 100 bases:

>100_bases
CGCGGGCACGCGCCGTTCCTGGCCCGGGCGCGGGCCGCCCTGGCACGCACCGCCCATGTAGGAATTACAAGCGCACGCGC
CGCGCGGGGGTATCGACCCT

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MKPAYEHVDFGAGCSVRIYHRRLPRIPFEWHHHPEYELTLTMNSRGKRYIGDSVAAYGDDDLVLVPPNLPHTWASNRSIE
AGSPQVAIVIWFDGAWLHRLADLCPEHNGLRDLLRRAACGLRFEDGAGTRMRERLDALLADAPRERLCAVLDLLHALAAT
PAEPLATPSAFGAAAGTLGTHAPERLARVLALIDTQYARPLRLAALAKAAGLSERTLTRQFARHLGESVGRYVTRVRLGH
ACRLLADTTLPVAVIAERSGFPSAAHFNRQFKAARGATPVAWRQQFAQARRAEAPALTERPPSLRTRPPARPVKAVRTR

Sequences:

>Translated_319_residues
MKPAYEHVDFGAGCSVRIYHRRLPRIPFEWHHHPEYELTLTMNSRGKRYIGDSVAAYGDDDLVLVPPNLPHTWASNRSIE
AGSPQVAIVIWFDGAWLHRLADLCPEHNGLRDLLRRAACGLRFEDGAGTRMRERLDALLADAPRERLCAVLDLLHALAAT
PAEPLATPSAFGAAAGTLGTHAPERLARVLALIDTQYARPLRLAALAKAAGLSERTLTRQFARHLGESVGRYVTRVRLGH
ACRLLADTTLPVAVIAERSGFPSAAHFNRQFKAARGATPVAWRQQFAQARRAEAPALTERPPSLRTRPPARPVKAVRTR
>Mature_319_residues
MKPAYEHVDFGAGCSVRIYHRRLPRIPFEWHHHPEYELTLTMNSRGKRYIGDSVAAYGDDDLVLVPPNLPHTWASNRSIE
AGSPQVAIVIWFDGAWLHRLADLCPEHNGLRDLLRRAACGLRFEDGAGTRMRERLDALLADAPRERLCAVLDLLHALAAT
PAEPLATPSAFGAAAGTLGTHAPERLARVLALIDTQYARPLRLAALAKAAGLSERTLTRQFARHLGESVGRYVTRVRLGH
ACRLLADTTLPVAVIAERSGFPSAAHFNRQFKAARGATPVAWRQQFAQARRAEAPALTERPPSLRTRPPARPVKAVRTR

Specific function: Activator Of The L-Rhamnose Operon. Rhar Putatively Autoregulates Its Synthesis. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 35212; Mature: 35212

Theoretical pI: Translated: 10.79; Mature: 10.79

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPAYEHVDFGAGCSVRIYHRRLPRIPFEWHHHPEYELTLTMNSRGKRYIGDSVAAYGDD
CCCCCCCCCCCCCCEEEEHHHHCCCCCCCCCCCCCEEEEEEECCCCCCHHCCCHHCCCCC
DLVLVPPNLPHTWASNRSIEAGSPQVAIVIWFDGAWLHRLADLCPEHNGLRDLLRRAACG
CEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHCC
LRFEDGAGTRMRERLDALLADAPRERLCAVLDLLHALAATPAEPLATPSAFGAAAGTLGT
CEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC
HAPERLARVLALIDTQYARPLRLAALAKAAGLSERTLTRQFARHLGESVGRYVTRVRLGH
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ACRLLADTTLPVAVIAERSGFPSAAHFNRQFKAARGATPVAWRQQFAQARRAEAPALTER
HHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCC
PPSLRTRPPARPVKAVRTR
CCCCCCCCCCCCHHHHCCC
>Mature Secondary Structure
MKPAYEHVDFGAGCSVRIYHRRLPRIPFEWHHHPEYELTLTMNSRGKRYIGDSVAAYGDD
CCCCCCCCCCCCCCEEEEHHHHCCCCCCCCCCCCCEEEEEEECCCCCCHHCCCHHCCCCC
DLVLVPPNLPHTWASNRSIEAGSPQVAIVIWFDGAWLHRLADLCPEHNGLRDLLRRAACG
CEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHCC
LRFEDGAGTRMRERLDALLADAPRERLCAVLDLLHALAATPAEPLATPSAFGAAAGTLGT
CEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC
HAPERLARVLALIDTQYARPLRLAALAKAAGLSERTLTRQFARHLGESVGRYVTRVRLGH
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ACRLLADTTLPVAVIAERSGFPSAAHFNRQFKAARGATPVAWRQQFAQARRAEAPALTER
HHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCC
PPSLRTRPPARPVKAVRTR
CCCCCCCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]