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The map label for this gene is uxuR [H]

Identifier: 238023942

GI number: 238023942

Start: 587129

End: 587833

Strand: Reverse

Name: uxuR [H]

Synonym: bglu_2g04910

Alternate gene names: 238023942

Gene position: 587833-587129 (Counterclockwise)

Preceding gene: 238023943

Following gene: 238023941

Centisome position: 20.79

GC content: 72.34

Gene sequence:

>705_bases
ATGTTCGAGAAAATCCCGGCGCGCGCGATGAGCGACGCCGTCGCGCAGCAGTTGCTCAGGCAGATCGAGATCGGCGGCTT
CGCCGGCACCGGCAAGCTGCCGACCGAATCCGTGCTGGCGCAGCAGTTCGGCGTGAGCCGCACGGTGATCCGCGAGGCGA
TCTCGCGGCTCAAGAACGAAGGCGTGGTCGAGCCGCGCCAGGGCAGCGGCGTGTTCATCGCGCAGCACGGCGCGATCCGG
CCACTGCGGATCGACTACGCGGAGGCGGTGGGAACGGGCTCGCTCGTGCACCTGCTCGCGCTGCGCCGGGCAATCGAGGC
CGAGGTGGCCGCCGAGGCCGCGCAGCGCCGCACCGACGCCGACCTGCAGCGCATCGACGCAGCCCTCGCGAAGATCGACG
CGGCCGTGGCCGCGGGCCGCGACGGCGTGGCCGAGGACATCGCGTTTCACCGCACGATCGCCGCCGTCACCGGCAACCCC
TATTTCCTGAAGACCCTGAGCTTCCTGAACCAGTACCTCGAAGCGGGCGTGATGGTCACGCGCCGCAACGAGGCGACGCG
CGAGGATTTCTCGCGCCAGGTGCGCGAGGAGCACGCGGCGATCGCCGCCGCGATCCGCGCCGGCGACGCGCCGGCCGCCG
GCAACGCGGCGCGCATCCATCTGGTGAACGCCGCGCGGCGCCTGGCGCAGGCGGGCCTGGGCTGA

Upstream 100 bases:

>100_bases
TCCCGTGCGCCACGCCTCGCCGTTGCGGGTAACTCCCGATGCCGGTGCATCCCTCGCAATTTGTATGATGACCACATCAC
CCGACAAATCCGCTTGCTTC

Downstream 100 bases:

>100_bases
TCCATTCGTCCGGCGAAGCCGGGCATCTGTTCGATACAAGGATTCACATGTCACGACAAGTAGGCGTCATCGGGCTCGGC
GCGATGGGACTCGGCGTGGC

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MFEKIPARAMSDAVAQQLLRQIEIGGFAGTGKLPTESVLAQQFGVSRTVIREAISRLKNEGVVEPRQGSGVFIAQHGAIR
PLRIDYAEAVGTGSLVHLLALRRAIEAEVAAEAAQRRTDADLQRIDAALAKIDAAVAAGRDGVAEDIAFHRTIAAVTGNP
YFLKTLSFLNQYLEAGVMVTRRNEATREDFSRQVREEHAAIAAAIRAGDAPAAGNAARIHLVNAARRLAQAGLG

Sequences:

>Translated_234_residues
MFEKIPARAMSDAVAQQLLRQIEIGGFAGTGKLPTESVLAQQFGVSRTVIREAISRLKNEGVVEPRQGSGVFIAQHGAIR
PLRIDYAEAVGTGSLVHLLALRRAIEAEVAAEAAQRRTDADLQRIDAALAKIDAAVAAGRDGVAEDIAFHRTIAAVTGNP
YFLKTLSFLNQYLEAGVMVTRRNEATREDFSRQVREEHAAIAAAIRAGDAPAAGNAARIHLVNAARRLAQAGLG
>Mature_234_residues
MFEKIPARAMSDAVAQQLLRQIEIGGFAGTGKLPTESVLAQQFGVSRTVIREAISRLKNEGVVEPRQGSGVFIAQHGAIR
PLRIDYAEAVGTGSLVHLLALRRAIEAEVAAEAAQRRTDADLQRIDAALAKIDAAVAAGRDGVAEDIAFHRTIAAVTGNP
YFLKTLSFLNQYLEAGVMVTRRNEATREDFSRQVREEHAAIAAAIRAGDAPAAGNAARIHLVNAARRLAQAGLG

Specific function: Repressor for the uxuRBA operon [H]

COG id: COG2186

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790032, Length=222, Percent_Identity=32.4324324324324, Blast_Score=91, Evalue=7e-20,
Organism=Escherichia coli, GI1790780, Length=202, Percent_Identity=28.2178217821782, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI48994955, Length=226, Percent_Identity=29.2035398230088, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1786303, Length=225, Percent_Identity=33.3333333333333, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1789621, Length=221, Percent_Identity=26.6968325791855, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1789353, Length=230, Percent_Identity=28.2608695652174, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI87082208, Length=152, Percent_Identity=32.2368421052632, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 24954; Mature: 24954

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEKIPARAMSDAVAQQLLRQIEIGGFAGTGKLPTESVLAQQFGVSRTVIREAISRLKNE
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHC
GVVEPRQGSGVFIAQHGAIRPLRIDYAEAVGTGSLVHLLALRRAIEAEVAAEAAQRRTDA
CCCCCCCCCEEEEECCCCCCCEEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLQRIDAALAKIDAAVAAGRDGVAEDIAFHRTIAAVTGNPYFLKTLSFLNQYLEAGVMVT
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEE
RRNEATREDFSRQVREEHAAIAAAIRAGDAPAAGNAARIHLVNAARRLAQAGLG
ECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFEKIPARAMSDAVAQQLLRQIEIGGFAGTGKLPTESVLAQQFGVSRTVIREAISRLKNE
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHC
GVVEPRQGSGVFIAQHGAIRPLRIDYAEAVGTGSLVHLLALRRAIEAEVAAEAAQRRTDA
CCCCCCCCCEEEEECCCCCCCEEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLQRIDAALAKIDAAVAAGRDGVAEDIAFHRTIAAVTGNPYFLKTLSFLNQYLEAGVMVT
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEE
RRNEATREDFSRQVREEHAAIAAAIRAGDAPAAGNAARIHLVNAARRLAQAGLG
ECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]