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The map label for this gene is ygbL [H]

Identifier: 238023939

GI number: 238023939

Start: 584228

End: 584866

Strand: Reverse

Name: ygbL [H]

Synonym: bglu_2g04880

Alternate gene names: 238023939

Gene position: 584866-584228 (Counterclockwise)

Preceding gene: 238023940

Following gene: 238023938

Centisome position: 20.69

GC content: 73.08

Gene sequence:

>639_bases
ATGAGCACCGAACAGCAGCTGCGCGAAACCCTCTGCGCAGTGGGCGCGAGCCTGTTCGCGCGCGGCCACGCGGTAGGCAC
CGCCGGCAACCTCAGCGCGCGGCTCGACGACGGCTGGCTGATCACGCCCACCGACGCATGCCTGGGCCGGCTCGACCCGG
CGCGCATCGCCAAGGTGGACCTGAACGGCCAGCCCGTGTCCGGCGACAAGCCCTCGAAGACGCTCGCGCTGCATCGCGGC
ATCTACGCGCGCAATCCCGAAGCGCGCGGCGTGGTCCACACGCACTCGACCCATCTCGTCGCGCTGACGCTCGCGGGAGT
CTGGCGCGACGAGGACGTGCTGCCGCCGATCACGCCGTATTACGTGATGAAGGTCGGCCATGTGCCGCTGATCCGCTACC
GGCGCCCGGGCGACCCCGCCGTCGCGGCCGAGGTGGCCGCGCTGGCCGACCGCGTGCGCGGCGTGCTGCTCGAACGGCTC
GGGCCGGTGGTGTGGGCGCCGTCGGTCGAGCAGGCCTCGGCGGTGCTCGAGGAGCTGGAGGAAACCGCGCGGCTGTGGCT
GATGACGAACCCGAAGCCGGCGCCGCTCGACGAGCCCGCGCTCGACGAGCTGCGCCGCAGCTTCGGCGCGCGCTGGTGA

Upstream 100 bases:

>100_bases
CCGCCACGCTCGACGGCCAGTTCGCGCTGGCGCTGAAGTCGGGCAATTTCGGCGCCGTCGATTTCTTCGCCAGGGCGCTG
GCACGTCTGGAGAACCTCGC

Downstream 100 bases:

>100_bases
GGCGCGCCGACACCGCCGGCGTGAGCGCCGCGCCGCCCTGATTCACCGACGGCGCGTCCGCCATGCGGCGCGCGCAACCT
GCCGGAGACTACGATGATCC

Product: putative aldolase

Products: glycerone phosphate; (S)-lactaldehyde

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MSTEQQLRETLCAVGASLFARGHAVGTAGNLSARLDDGWLITPTDACLGRLDPARIAKVDLNGQPVSGDKPSKTLALHRG
IYARNPEARGVVHTHSTHLVALTLAGVWRDEDVLPPITPYYVMKVGHVPLIRYRRPGDPAVAAEVAALADRVRGVLLERL
GPVVWAPSVEQASAVLEELEETARLWLMTNPKPAPLDEPALDELRRSFGARW

Sequences:

>Translated_212_residues
MSTEQQLRETLCAVGASLFARGHAVGTAGNLSARLDDGWLITPTDACLGRLDPARIAKVDLNGQPVSGDKPSKTLALHRG
IYARNPEARGVVHTHSTHLVALTLAGVWRDEDVLPPITPYYVMKVGHVPLIRYRRPGDPAVAAEVAALADRVRGVLLERL
GPVVWAPSVEQASAVLEELEETARLWLMTNPKPAPLDEPALDELRRSFGARW
>Mature_211_residues
STEQQLRETLCAVGASLFARGHAVGTAGNLSARLDDGWLITPTDACLGRLDPARIAKVDLNGQPVSGDKPSKTLALHRGI
YARNPEARGVVHTHSTHLVALTLAGVWRDEDVLPPITPYYVMKVGHVPLIRYRRPGDPAVAAEVAALADRVRGVLLERLG
PVVWAPSVEQASAVLEELEETARLWLMTNPKPAPLDEPALDELRRSFGARW

Specific function: Unknown

COG id: COG0235

COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldolase class II family. AraD/FucA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789094, Length=191, Percent_Identity=46.5968586387435, Blast_Score=174, Evalue=5e-45,
Organism=Escherichia coli, GI1789164, Length=194, Percent_Identity=29.8969072164948, Blast_Score=79, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001303 [H]

Pfam domain/function: PF00596 Aldolase_II [H]

EC number: 4.1.2.17

Molecular weight: Translated: 23040; Mature: 22908

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTEQQLRETLCAVGASLFARGHAVGTAGNLSARLDDGWLITPTDACLGRLDPARIAKVD
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCEEECCHHHHHCCCCHHHEEEEE
LNGQPVSGDKPSKTLALHRGIYARNPEARGVVHTHSTHLVALTLAGVWRDEDVLPPITPY
CCCCCCCCCCCCHHHHHHCCCCCCCCCCCCEEEECCCEEEEEEEHHCCCCCCCCCCCCHH
YVMKVGHVPLIRYRRPGDPAVAAEVAALADRVRGVLLERLGPVVWAPSVEQASAVLEELE
HHEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHH
ETARLWLMTNPKPAPLDEPALDELRRSFGARW
HHHHEEEEECCCCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
STEQQLRETLCAVGASLFARGHAVGTAGNLSARLDDGWLITPTDACLGRLDPARIAKVD
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCEEECCHHHHHCCCCHHHEEEEE
LNGQPVSGDKPSKTLALHRGIYARNPEARGVVHTHSTHLVALTLAGVWRDEDVLPPITPY
CCCCCCCCCCCCHHHHHHCCCCCCCCCCCCEEEECCCEEEEEEEHHCCCCCCCCCCCCHH
YVMKVGHVPLIRYRRPGDPAVAAEVAALADRVRGVLLERLGPVVWAPSVEQASAVLEELE
HHEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHH
ETARLWLMTNPKPAPLDEPALDELRRSFGARW
HHHHEEEEECCCCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: L-fuculose 1-phosphate

Specific reaction: L-fuculose 1-phosphate = glycerone phosphate + (S)-lactaldehyde

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10986240; 9278503 [H]