| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238023932
Identifier: 238023932
GI number: 238023932
Start: 577761
End: 578450
Strand: Reverse
Name: 238023932
Synonym: bglu_2g04810
Alternate gene names: NA
Gene position: 578450-577761 (Counterclockwise)
Preceding gene: 238023936
Following gene: 238023927
Centisome position: 20.46
GC content: 68.12
Gene sequence:
>690_bases ATGTCAGCTGTTTACGACTACGCCACCGTTTTGCTTCGCTCGCTGTACGACCGCCACATCGAAAACGGCGCGGTGCTCGA CAGCGCGGTGTTTCCCGACGCGGCGCGCTTTGCCGGCGCGTGGCGCGAGATTCGCGCGGAGGCGTTCGAGGTGGCGCGCG AGCTGCCGCGCATCCCGCGCTTTCACGACATCATGAGCGAGCAGGCCGACATCTCCGCGAACGACAACCGCGACTGGCGG ATGTTCATCATGCAGGCCTACGGCGTGCGCTTCGCGAAGAACCGCACGCGCTGCCCGCGCATCACCGAGCTCGTCGACGC CTCGCCCGACGTGCTGTCGGCCTCGCTGTCGTTTCTCGCGCCGGGCAAGCACATCCCGCCGCATCGCGGACCGTTTCGCG GCGTGCTGCGCGGCTACCTGGTGCTGTCGATGCCCAAGCGCGAGGACGGCACGCCGGCGGCCGTGCTGAAGGTGGACGGC CGCAGCTACCGGCTCGACGACGGCCAGTTCCTGCTGTGGGACGACACCTTCGAACACGAGGTCTGGAACGACAGCGACCA GGTGCGGATCGTGCTGCTGCTCGACATCCGCCGGCGCGACCTGCCCTTGCACCTGCAATGGCTGTCGGCCGGCATCGTGC AACTGATCCGGCTCGGCATCCGGCTGCGCGGCGGCTCGATTCCGGTCTGA
Upstream 100 bases:
>100_bases GCCGCCAGTCAAGCTTTCGTCAGCGGGTGTAACCTGCCGTAACCTGAAATCCTTCCGGATTGGGGCAGTATGTCTGCAGA TGCCCCGACGTTACAGGATC
Downstream 100 bases:
>100_bases CTCGCGCGCCGGGCGAGACGGGCCAGGCCTCGCGCTCAAGGCAGGCCCAGATAGCGCCTCACGGCCGGCAGCCCCGGCTT GCCGTCGAACGTCGTGACGC
Product: Aspartyl/Asparaginyl beta-hydroxylase
Products: NA
Alternate protein names: Beta-Hydroxylase; Asparaginyl Beta-Hydroxylase; Membrane-Bound Beta-Hydroxylase; Lipid A-Myristate Beta-Hydroxylase; Aspartyl-Asparaginyl Beta-Hydroxylase; Aspartyl/Asparaginyl Beta-Hydroxylase Family Protein; Aspartyl/Asparaginyl Beta-Hydroxylase Family; Lipopolysaccharide Biosynthetic; Aspartyl/Asparaginyl Beta-Hydroxylase Transmembrane Protein; Beta-Hydroxylase Aspartyl/Asparaginyl Family; Peptide Aspartate B-Dioxygenase; Aspartyl/Asparaginyl-Beta-Hydroxylase; Hydroxylase; Peptide-Aspartate B-Dioxygenase; Lipopolysaccharide Biosynthetic Protein; Dioxygenase; Peptide-Aspartate Beta-Dioxygenase
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MSAVYDYATVLLRSLYDRHIENGAVLDSAVFPDAARFAGAWREIRAEAFEVARELPRIPRFHDIMSEQADISANDNRDWR MFIMQAYGVRFAKNRTRCPRITELVDASPDVLSASLSFLAPGKHIPPHRGPFRGVLRGYLVLSMPKREDGTPAAVLKVDG RSYRLDDGQFLLWDDTFEHEVWNDSDQVRIVLLLDIRRRDLPLHLQWLSAGIVQLIRLGIRLRGGSIPV
Sequences:
>Translated_229_residues MSAVYDYATVLLRSLYDRHIENGAVLDSAVFPDAARFAGAWREIRAEAFEVARELPRIPRFHDIMSEQADISANDNRDWR MFIMQAYGVRFAKNRTRCPRITELVDASPDVLSASLSFLAPGKHIPPHRGPFRGVLRGYLVLSMPKREDGTPAAVLKVDG RSYRLDDGQFLLWDDTFEHEVWNDSDQVRIVLLLDIRRRDLPLHLQWLSAGIVQLIRLGIRLRGGSIPV >Mature_228_residues SAVYDYATVLLRSLYDRHIENGAVLDSAVFPDAARFAGAWREIRAEAFEVARELPRIPRFHDIMSEQADISANDNRDWRM FIMQAYGVRFAKNRTRCPRITELVDASPDVLSASLSFLAPGKHIPPHRGPFRGVLRGYLVLSMPKREDGTPAAVLKVDGR SYRLDDGQFLLWDDTFEHEVWNDSDQVRIVLLLDIRRRDLPLHLQWLSAGIVQLIRLGIRLRGGSIPV
Specific function: Unknown
COG id: COG3555
COG function: function code O; Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI258613943, Length=146, Percent_Identity=27.3972602739726, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI14589866, Length=146, Percent_Identity=27.3972602739726, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24654024, Length=161, Percent_Identity=31.055900621118, Blast_Score=73, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26134; Mature: 26003
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAVYDYATVLLRSLYDRHIENGAVLDSAVFPDAARFAGAWREIRAEAFEVARELPRIPR CCHHHHHHHHHHHHHHHHHCCCCCEECHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCH FHDIMSEQADISANDNRDWRMFIMQAYGVRFAKNRTRCPRITELVDASPDVLSASLSFLA HHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHC PGKHIPPHRGPFRGVLRGYLVLSMPKREDGTPAAVLKVDGRSYRLDDGQFLLWDDTFEHE CCCCCCCCCCHHHHHHHHHHEEECCCCCCCCCEEEEEECCCEEEECCCCEEEECCCCCCC VWNDSDQVRIVLLLDIRRRDLPLHLQWLSAGIVQLIRLGIRLRGGSIPV CCCCCCCEEEEEEEECCCCCCCEEHHHHHHHHHHHHHHHHEECCCCCCC >Mature Secondary Structure SAVYDYATVLLRSLYDRHIENGAVLDSAVFPDAARFAGAWREIRAEAFEVARELPRIPR CHHHHHHHHHHHHHHHHHCCCCCEECHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCH FHDIMSEQADISANDNRDWRMFIMQAYGVRFAKNRTRCPRITELVDASPDVLSASLSFLA HHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHC PGKHIPPHRGPFRGVLRGYLVLSMPKREDGTPAAVLKVDGRSYRLDDGQFLLWDDTFEHE CCCCCCCCCCHHHHHHHHHHEEECCCCCCCCCEEEEEECCCEEEECCCCEEEECCCCCCC VWNDSDQVRIVLLLDIRRRDLPLHLQWLSAGIVQLIRLGIRLRGGSIPV CCCCCCCEEEEEEEECCCCCCCEEHHHHHHHHHHHHHHHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA