Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is 238023936

Identifier: 238023936

GI number: 238023936

Start: 581896

End: 582867

Strand: Reverse

Name: 238023936

Synonym: bglu_2g04850

Alternate gene names: NA

Gene position: 582867-581896 (Counterclockwise)

Preceding gene: 238023937

Following gene: 238023932

Centisome position: 20.62

GC content: 72.53

Gene sequence:

>972_bases
ATGAAAGTCCTGATCACCGGCGGCGCCGGCTTCCTCGGCCGCCGCCTCGCCACCCGGCTGCTGGCGCGCGGTGAACTCGC
CGGCCCGGGCGGCAGGCCCGAGCCCATCGACGAACTGCTGCTGCTCGACGTGGCGCAGGCCGCCGGCTTCGACGACGCGC
GCGTCACCACGCGGGTCGGCGACATCGCCGATCGCACCGTCCTGGAGCGCGCGATCGACACGCGCACCGGCGCGATCTTC
CATCTCGCGGCCATCGTCAGCGGCCAGGCCGAGGCCGATTTCGAACTCGGCATGCGCATCAACCTCGATGCGTCGCGCAC
GCTGCTGGAGGTGTGCCGTGCGCTCGGCCACCGCCCGCGCGTGGTGTTCACGAGCTCGGTGGCCGTCTATGGCGGCGCGC
TGCCGCAAATCGTGCAGGACGACACCGCGCTCAATCCGCAATCGTCGTATGGCACGCAGAAGGCGATCGCCGAACTGCTG
CTCTGCGACTACACGCGGCGCGGCTTCGTGGACGGCCGCGTGCTGCGCCTGCCCACCATCAGCGTGCGGCCGGGACGGCC
GAACGCGGCGGCCTCGTCGTTCGCGAGCGGTATCATCCGCGAGCCGCTCAACGGCGTCGAATCGGTCTGCCCGGTGCCGC
TCGACACGCGGCTCTGGCTGCTCTCGCCGCGCCGCGCGATCGACGCGCTGGTGGCCGGCTGCGAGCTCGACGGCGAGCAA
CTCGGCAGCCGCCGCATCGTCAACCTGCCGGGGATCTCGGTCAGCGTCGGCGAGATGATCGACGCGCTGCGCGAGGTGGC
CGGCGACGCGCCCGTGGCCAGGATCCGCCACGCGATGGACCCGCGCGTGGCGGCAATCGTCGGCAGCTGGCCGGGCCGCT
GGGACGTGTCGCGCGCCGCGTCGCTCGGATTCGTCGGCGACGCGGGGTTCGCCGACGTGATCCGTGCCTATCTCGAGGAC
GAGCGCGGCTGA

Upstream 100 bases:

>100_bases
CCTCCGACGGCCTCGGCTGGCTGCGCCCGTACCGGTGAGCCGTCGCGCCCTCGCTTCGCGCCGCGTCGCGCGCCTCTGAA
CCGACCCACGCACAACGCCC

Downstream 100 bases:

>100_bases
TACCGCACCCGCGTGCCGCCGGCATGGAGCGCGCCCAAGCACACCCCTCGCCGCCGGGCCACCGGCGGCGAGCTGATGTC
ATGACGCGGCTATACGGCGA

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MKVLITGGAGFLGRRLATRLLARGELAGPGGRPEPIDELLLLDVAQAAGFDDARVTTRVGDIADRTVLERAIDTRTGAIF
HLAAIVSGQAEADFELGMRINLDASRTLLEVCRALGHRPRVVFTSSVAVYGGALPQIVQDDTALNPQSSYGTQKAIAELL
LCDYTRRGFVDGRVLRLPTISVRPGRPNAAASSFASGIIREPLNGVESVCPVPLDTRLWLLSPRRAIDALVAGCELDGEQ
LGSRRIVNLPGISVSVGEMIDALREVAGDAPVARIRHAMDPRVAAIVGSWPGRWDVSRAASLGFVGDAGFADVIRAYLED
ERG

Sequences:

>Translated_323_residues
MKVLITGGAGFLGRRLATRLLARGELAGPGGRPEPIDELLLLDVAQAAGFDDARVTTRVGDIADRTVLERAIDTRTGAIF
HLAAIVSGQAEADFELGMRINLDASRTLLEVCRALGHRPRVVFTSSVAVYGGALPQIVQDDTALNPQSSYGTQKAIAELL
LCDYTRRGFVDGRVLRLPTISVRPGRPNAAASSFASGIIREPLNGVESVCPVPLDTRLWLLSPRRAIDALVAGCELDGEQ
LGSRRIVNLPGISVSVGEMIDALREVAGDAPVARIRHAMDPRVAAIVGSWPGRWDVSRAASLGFVGDAGFADVIRAYLED
ERG
>Mature_323_residues
MKVLITGGAGFLGRRLATRLLARGELAGPGGRPEPIDELLLLDVAQAAGFDDARVTTRVGDIADRTVLERAIDTRTGAIF
HLAAIVSGQAEADFELGMRINLDASRTLLEVCRALGHRPRVVFTSSVAVYGGALPQIVQDDTALNPQSSYGTQKAIAELL
LCDYTRRGFVDGRVLRLPTISVRPGRPNAAASSFASGIIREPLNGVESVCPVPLDTRLWLLSPRRAIDALVAGCELDGEQ
LGSRRIVNLPGISVSVGEMIDALREVAGDAPVARIRHAMDPRVAAIVGSWPGRWDVSRAASLGFVGDAGFADVIRAYLED
ERG

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI32566934, Length=308, Percent_Identity=25.974025974026, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24667531, Length=301, Percent_Identity=25.2491694352159, Blast_Score=83, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 34393; Mature: 34393

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLITGGAGFLGRRLATRLLARGELAGPGGRPEPIDELLLLDVAQAAGFDDARVTTRVG
CEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHH
DIADRTVLERAIDTRTGAIFHLAAIVSGQAEADFELGMRINLDASRTLLEVCRALGHRPR
HHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEECEEEECCHHHHHHHHHHHHCCCCC
VVFTSSVAVYGGALPQIVQDDTALNPQSSYGTQKAIAELLLCDYTRRGFVDGRVLRLPTI
EEEECCHHHHCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCEE
SVRPGRPNAAASSFASGIIREPLNGVESVCPVPLDTRLWLLSPRRAIDALVAGCELDGEQ
EECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCCCCHHH
LGSRRIVNLPGISVSVGEMIDALREVAGDAPVARIRHAMDPRVAAIVGSWPGRWDVSRAA
CCCCEEEECCCCEEEHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEECCCCCCCCHHHHH
SLGFVGDAGFADVIRAYLEDERG
CCCCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MKVLITGGAGFLGRRLATRLLARGELAGPGGRPEPIDELLLLDVAQAAGFDDARVTTRVG
CEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHH
DIADRTVLERAIDTRTGAIFHLAAIVSGQAEADFELGMRINLDASRTLLEVCRALGHRPR
HHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEECEEEECCHHHHHHHHHHHHCCCCC
VVFTSSVAVYGGALPQIVQDDTALNPQSSYGTQKAIAELLLCDYTRRGFVDGRVLRLPTI
EEEECCHHHHCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCEE
SVRPGRPNAAASSFASGIIREPLNGVESVCPVPLDTRLWLLSPRRAIDALVAGCELDGEQ
EECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCCCCHHH
LGSRRIVNLPGISVSVGEMIDALREVAGDAPVARIRHAMDPRVAAIVGSWPGRWDVSRAA
CCCCEEEECCCCEEEHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEECCCCCCCCHHHHH
SLGFVGDAGFADVIRAYLEDERG
CCCCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]